Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS21150 and ABZR86_RS21155 are separated by 58 nucleotides ABZR86_RS21155 and ABZR86_RS21160 are separated by 106 nucleotides ABZR86_RS21160 and ABZR86_RS21165 are separated by 14 nucleotides ABZR86_RS21165 and ABZR86_RS21170 overlap by 4 nucleotides
ABZR86_RS21150: ABZR86_RS21150 - MBL fold metallo-hydrolase, at 198,073 to 198,960
_RS21150
ABZR86_RS21155: ABZR86_RS21155 - NAD(P)-dependent oxidoreductase, at 199,019 to 199,657
_RS21155
ABZR86_RS21160: ABZR86_RS21160 - cytochrome c, at 199,764 to 200,306
_RS21160
ABZR86_RS21165: ABZR86_RS21165 - copper resistance protein B, at 200,321 to 201,253
_RS21165
ABZR86_RS21170: ABZR86_RS21170 - copper resistance system multicopper oxidase, at 201,250 to 202,959
_RS21170
Position (kb) 199
200
201 Strain fitness (log2 ratio) -1
0
1
2
3 at 198.799 kb on + strand, within ABZR86_RS21150 at 198.800 kb on - strand, within ABZR86_RS21150 at 198.800 kb on - strand, within ABZR86_RS21150 at 198.801 kb on + strand, within ABZR86_RS21150 at 198.811 kb on + strand, within ABZR86_RS21150 at 198.812 kb on - strand, within ABZR86_RS21150 at 198.812 kb on - strand, within ABZR86_RS21150 at 198.812 kb on - strand, within ABZR86_RS21150 at 198.812 kb on - strand, within ABZR86_RS21150 at 198.823 kb on + strand, within ABZR86_RS21150 at 198.823 kb on + strand, within ABZR86_RS21150 at 198.824 kb on - strand, within ABZR86_RS21150 at 198.824 kb on - strand, within ABZR86_RS21150 at 198.824 kb on - strand, within ABZR86_RS21150 at 198.824 kb on - strand, within ABZR86_RS21150 at 198.824 kb on - strand, within ABZR86_RS21150 at 198.958 kb on + strand at 198.990 kb on + strand at 199.092 kb on - strand, within ABZR86_RS21155 at 199.200 kb on + strand, within ABZR86_RS21155 at 199.472 kb on + strand, within ABZR86_RS21155 at 199.472 kb on + strand, within ABZR86_RS21155 at 199.472 kb on + strand, within ABZR86_RS21155 at 199.472 kb on + strand, within ABZR86_RS21155 at 199.473 kb on - strand, within ABZR86_RS21155 at 199.520 kb on + strand, within ABZR86_RS21155 at 199.586 kb on + strand, within ABZR86_RS21155 at 199.586 kb on + strand, within ABZR86_RS21155 at 199.586 kb on + strand, within ABZR86_RS21155 at 199.587 kb on - strand, within ABZR86_RS21155 at 199.681 kb on - strand at 200.021 kb on - strand, within ABZR86_RS21160 at 200.089 kb on + strand, within ABZR86_RS21160 at 200.090 kb on - strand, within ABZR86_RS21160 at 200.090 kb on - strand, within ABZR86_RS21160 at 200.249 kb on - strand, within ABZR86_RS21160 at 200.310 kb on + strand at 200.310 kb on + strand at 200.310 kb on + strand at 200.311 kb on - strand at 200.415 kb on + strand, within ABZR86_RS21165 at 200.515 kb on - strand, within ABZR86_RS21165 at 200.515 kb on - strand, within ABZR86_RS21165 at 200.543 kb on + strand, within ABZR86_RS21165 at 200.544 kb on - strand, within ABZR86_RS21165 at 200.544 kb on - strand, within ABZR86_RS21165 at 200.571 kb on + strand, within ABZR86_RS21165 at 200.571 kb on + strand, within ABZR86_RS21165 at 200.571 kb on + strand, within ABZR86_RS21165 at 200.571 kb on + strand, within ABZR86_RS21165 at 200.572 kb on - strand, within ABZR86_RS21165 at 200.756 kb on + strand, within ABZR86_RS21165 at 201.293 kb on + strand at 201.294 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 198,799 + ABZR86_RS21150 0.82 +1.0 198,800 - ABZR86_RS21150 0.82 +0.5 198,800 - ABZR86_RS21150 0.82 +0.2 198,801 + ABZR86_RS21150 0.82 -0.7 198,811 + ABZR86_RS21150 0.83 +0.2 198,812 - ABZR86_RS21150 0.83 +0.5 198,812 - ABZR86_RS21150 0.83 +1.5 198,812 - ABZR86_RS21150 0.83 +0.0 198,812 - ABZR86_RS21150 0.83 -0.6 198,823 + ABZR86_RS21150 0.84 -0.8 198,823 + ABZR86_RS21150 0.84 -0.2 198,824 - ABZR86_RS21150 0.85 -0.2 198,824 - ABZR86_RS21150 0.85 +0.4 198,824 - ABZR86_RS21150 0.85 +0.5 198,824 - ABZR86_RS21150 0.85 -0.1 198,824 - ABZR86_RS21150 0.85 -0.3 198,958 + +0.4 198,990 + -0.6 199,092 - ABZR86_RS21155 0.11 -1.2 199,200 + ABZR86_RS21155 0.28 +0.1 199,472 + ABZR86_RS21155 0.71 +1.4 199,472 + ABZR86_RS21155 0.71 -0.3 199,472 + ABZR86_RS21155 0.71 -0.6 199,472 + ABZR86_RS21155 0.71 -0.1 199,473 - ABZR86_RS21155 0.71 -0.1 199,520 + ABZR86_RS21155 0.78 +0.7 199,586 + ABZR86_RS21155 0.89 +0.2 199,586 + ABZR86_RS21155 0.89 -0.3 199,586 + ABZR86_RS21155 0.89 +2.8 199,587 - ABZR86_RS21155 0.89 -0.6 199,681 - +0.1 200,021 - ABZR86_RS21160 0.47 -0.8 200,089 + ABZR86_RS21160 0.60 -0.6 200,090 - ABZR86_RS21160 0.60 +0.3 200,090 - ABZR86_RS21160 0.60 +1.4 200,249 - ABZR86_RS21160 0.89 -1.1 200,310 + -0.4 200,310 + +0.0 200,310 + +0.2 200,311 - +0.0 200,415 + ABZR86_RS21165 0.10 -0.7 200,515 - ABZR86_RS21165 0.21 -0.4 200,515 - ABZR86_RS21165 0.21 +0.1 200,543 + ABZR86_RS21165 0.24 -0.0 200,544 - ABZR86_RS21165 0.24 -1.2 200,544 - ABZR86_RS21165 0.24 +0.1 200,571 + ABZR86_RS21165 0.27 +0.2 200,571 + ABZR86_RS21165 0.27 +0.0 200,571 + ABZR86_RS21165 0.27 -0.2 200,571 + ABZR86_RS21165 0.27 +0.8 200,572 - ABZR86_RS21165 0.27 -0.0 200,756 + ABZR86_RS21165 0.47 -1.5 201,293 + -1.6 201,294 - +0.1
Or see this region's nucleotide sequence