Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS14365

Experiment: pyruvate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	pyruvate (C)
3,202,007	+				-1.4
3,202,007	+				-0.1
3,202,007	+				-2.5
3,202,007	+				+0.3
3,202,007	+				+0.2
3,202,008	-				+0.3
3,202,008	-				+0.6
3,202,008	-				+0.7
3,202,008	-				+0.1
3,202,008	-				+0.0
3,202,008	-				-0.1
3,202,318	+		ABZR86_RS14360	0.44	-0.3
3,202,318	+		ABZR86_RS14360	0.44	-2.2
3,202,319	-		ABZR86_RS14360	0.44	-0.6
3,202,319	-		ABZR86_RS14360	0.44	+0.1
3,202,319	-		ABZR86_RS14360	0.44	+0.2
3,202,319	-		ABZR86_RS14360	0.44	+0.4
3,202,319	-		ABZR86_RS14360	0.44	+0.3
3,202,319	-		ABZR86_RS14360	0.44	+0.5
3,202,388	+		ABZR86_RS14360	0.57	+0.8
3,202,388	+		ABZR86_RS14360	0.57	-0.3
3,202,388	+		ABZR86_RS14360	0.57	+0.8
3,202,389	-		ABZR86_RS14360	0.57	+0.1
3,202,559	+		ABZR86_RS14360	0.90	-0.4
3,202,559	+		ABZR86_RS14360	0.90	+0.3
3,202,560	-		ABZR86_RS14360	0.90	+0.4
3,202,646	+				+0.1
3,202,647	-				+0.1
3,202,647	-				-0.2
3,202,655	+				+0.7
3,202,655	+				-0.7
3,202,655	+				+0.1
3,202,655	+				-0.2
3,202,655	+				+0.6
3,202,655	+				-0.8
3,202,655	+				+0.0
3,202,655	+				-0.1
3,202,655	+				+0.4
3,202,655	+				+0.9
3,202,655	+				-0.0
3,202,655	+				+0.3
3,202,655	+				-0.2
3,202,655	+				-0.8
3,202,655	+				-0.5
3,202,655	+				-1.2
3,202,655	+				-0.8
3,202,655	+				-0.0
3,202,655	+				-0.5
3,202,655	+				-0.9
3,202,655	+				+1.2
3,202,655	+				+0.3
3,202,655	+				-0.5
3,202,656	-				+0.5
3,202,656	-				+0.9
3,202,656	-				+0.2
3,202,656	-				-0.2
3,202,656	-				+0.8
3,202,656	-				-0.2
3,202,656	-				-0.1
3,202,656	-				-0.2
3,202,656	-				-1.2
3,202,656	-				-0.4
3,202,656	-				-0.1
3,202,656	-				+0.1
3,202,656	-				-1.3
3,202,656	-				+0.6
3,202,656	-				+0.4
3,202,656	-				-0.4
3,202,656	-				+1.0
3,202,656	-				-0.2
3,202,656	-				-0.6
3,202,656	-				-0.4
3,202,656	-				+0.7
3,202,656	-				-0.4
3,202,656	-				-0.7
3,202,656	-				+1.0
3,202,656	-				-0.1
3,202,656	-				+0.4
3,202,656	-				-0.3
3,202,719	-				-0.8
3,202,719	-				-0.4
3,202,769	+				-0.7
3,202,770	-				-0.5
3,202,806	+				-0.3
3,202,806	+				+0.2
3,202,806	+				+0.2
3,202,806	+				-1.3
3,202,806	+				-0.1
3,202,806	+				+0.3
3,202,806	+				+0.4
3,202,807	-				-0.2
3,203,217	+		ABZR86_RS14365	0.25	+2.3
3,203,218	-		ABZR86_RS14365	0.25	+0.2
3,203,218	-		ABZR86_RS14365	0.25	-0.2
3,203,218	-		ABZR86_RS14365	0.25	-0.3
3,203,218	-		ABZR86_RS14365	0.25	+0.5
3,203,218	-		ABZR86_RS14365	0.25	-0.1
3,203,218	-		ABZR86_RS14365	0.25	-0.6
3,203,394	+		ABZR86_RS14365	0.38	-2.4
3,203,395	-		ABZR86_RS14365	0.38	-0.6
3,203,395	-		ABZR86_RS14365	0.38	-0.5
3,203,395	-		ABZR86_RS14365	0.38	+0.0
3,203,395	-		ABZR86_RS14365	0.38	+0.1
3,203,436	+		ABZR86_RS14365	0.41	-0.5
3,203,436	+		ABZR86_RS14365	0.41	+0.6
3,203,437	-		ABZR86_RS14365	0.41	+0.2
3,203,437	-		ABZR86_RS14365	0.41	+0.3
3,203,437	-		ABZR86_RS14365	0.41	-0.3
3,203,437	-		ABZR86_RS14365	0.41	+1.6
3,203,437	-		ABZR86_RS14365	0.41	-0.1
3,203,634	+		ABZR86_RS14365	0.55	-1.3
3,203,635	-		ABZR86_RS14365	0.55	+2.9
3,203,643	+		ABZR86_RS14365	0.55	-1.1
3,203,643	+		ABZR86_RS14365	0.55	+0.3
3,203,643	+		ABZR86_RS14365	0.55	+0.2
3,203,643	+		ABZR86_RS14365	0.55	-0.9
3,203,644	-		ABZR86_RS14365	0.56	-0.2
3,203,644	-		ABZR86_RS14365	0.56	-1.6
3,203,644	-		ABZR86_RS14365	0.56	+0.4
3,203,644	-		ABZR86_RS14365	0.56	-0.1
3,203,644	-		ABZR86_RS14365	0.56	-2.9
3,203,673	+		ABZR86_RS14365	0.58	-0.3
3,203,673	+		ABZR86_RS14365	0.58	+0.4
3,203,673	+		ABZR86_RS14365	0.58	+0.2
3,203,673	+		ABZR86_RS14365	0.58	+1.1
3,203,673	+		ABZR86_RS14365	0.58	-0.3
3,203,674	-		ABZR86_RS14365	0.58	-0.2
3,203,674	-		ABZR86_RS14365	0.58	-0.5
3,203,674	-		ABZR86_RS14365	0.58	-0.8
3,203,706	+		ABZR86_RS14365	0.60	+0.1
3,203,706	+		ABZR86_RS14365	0.60	-0.4
3,203,707	-		ABZR86_RS14365	0.60	-1.9
3,203,830	-		ABZR86_RS14365	0.69	-1.3
3,203,830	-		ABZR86_RS14365	0.69	+0.0
3,203,830	-		ABZR86_RS14365	0.69	-1.3
3,203,830	-		ABZR86_RS14365	0.69	+1.6
3,203,988	+		ABZR86_RS14365	0.80	+0.8
3,203,988	+		ABZR86_RS14365	0.80	-0.3
3,203,989	-		ABZR86_RS14365	0.80	+1.3
3,203,989	-		ABZR86_RS14365	0.80	+0.1
3,203,989	-		ABZR86_RS14365	0.80	+1.2
3,204,000	+		ABZR86_RS14365	0.81	-0.3
3,204,000	+		ABZR86_RS14365	0.81	+0.4
3,204,001	-		ABZR86_RS14365	0.81	-0.3
3,204,052	-		ABZR86_RS14365	0.85	-2.3
3,204,052	-		ABZR86_RS14365	0.85	-0.4
3,204,144	+				-0.8
3,204,144	+				+1.7
3,204,297	+				-0.7
3,204,297	+				-1.0
3,204,297	+				+0.0
3,204,298	-				-0.0
3,204,298	-				-0.5
3,204,298	-				-0.4
3,204,298	-				-0.3
3,204,298	-				-0.4
3,204,318	+				+0.4
3,204,318	+				-0.8
3,204,319	-				-0.3
3,204,319	-				-0.7
3,204,319	-				-0.2
3,204,319	-				+0.7
3,204,324	+				+0.2
3,204,325	-				-0.1
3,204,438	+		ABZR86_RS14370	0.19	+0.1
3,204,438	+		ABZR86_RS14370	0.19	+0.1
3,204,438	+		ABZR86_RS14370	0.19	-0.4
3,204,439	-		ABZR86_RS14370	0.19	+0.2
3,204,439	-		ABZR86_RS14370	0.19	-1.5
3,204,439	-		ABZR86_RS14370	0.19	-0.9
3,204,522	+		ABZR86_RS14370	0.30	-0.7
3,204,522	+		ABZR86_RS14370	0.30	+0.2
3,204,523	-		ABZR86_RS14370	0.31	+0.1
3,204,523	-		ABZR86_RS14370	0.31	-0.3
3,204,577	-		ABZR86_RS14370	0.38	+0.4
3,204,577	-		ABZR86_RS14370	0.38	-0.9
3,204,627	+		ABZR86_RS14370	0.44	+0.3
3,204,739	-		ABZR86_RS14370	0.60	-0.1
3,204,769	-		ABZR86_RS14370	0.64	+0.4
3,204,769	-		ABZR86_RS14370	0.64	+1.3
3,204,769	-		ABZR86_RS14370	0.64	-0.5
3,204,783	+		ABZR86_RS14370	0.65	+0.5
3,204,783	+		ABZR86_RS14370	0.65	-0.2
3,204,784	-		ABZR86_RS14370	0.66	-0.3
3,204,846	+		ABZR86_RS14370	0.74	-0.7
3,204,846	+		ABZR86_RS14370	0.74	-0.6
3,204,846	+		ABZR86_RS14370	0.74	+0.2
3,204,847	-		ABZR86_RS14370	0.74	-1.8
3,204,847	-		ABZR86_RS14370	0.74	+0.8
3,204,847	-		ABZR86_RS14370	0.74	-0.3
3,204,847	-		ABZR86_RS14370	0.74	-0.1
3,204,847	-		ABZR86_RS14370	0.74	-0.4
3,204,847	-		ABZR86_RS14370	0.74	+0.2
3,204,880	+		ABZR86_RS14370	0.78	-0.7
3,204,880	+		ABZR86_RS14370	0.78	+0.3
3,204,880	+		ABZR86_RS14370	0.78	+0.1
3,204,882	+		ABZR86_RS14370	0.79	+0.4
3,204,882	+		ABZR86_RS14370	0.79	+0.2
3,204,882	+		ABZR86_RS14370	0.79	+0.1
3,204,883	-		ABZR86_RS14370	0.79	+0.4
3,204,883	-		ABZR86_RS14370	0.79	-0.0
3,204,883	-		ABZR86_RS14370	0.79	-0.5
3,204,883	-		ABZR86_RS14370	0.79	+0.9
3,204,883	-		ABZR86_RS14370	0.79	+0.3
3,204,883	-		ABZR86_RS14370	0.79	+0.6
3,204,883	-		ABZR86_RS14370	0.79	+0.3
3,204,883	-		ABZR86_RS14370	0.79	-1.1
3,204,909	+		ABZR86_RS14370	0.82	-0.3
3,204,909	+		ABZR86_RS14370	0.82	-0.2
3,204,910	-		ABZR86_RS14370	0.83	-0.2
3,204,910	-		ABZR86_RS14370	0.83	-0.8
3,204,910	-		ABZR86_RS14370	0.83	+1.1
3,204,910	-		ABZR86_RS14370	0.83	-0.3
3,204,921	+		ABZR86_RS14370	0.84	+1.2
3,205,035	+				-0.3
3,205,036	-				-0.4
3,205,036	-				+0.4
3,205,036	-				+0.2
3,205,084	-				-0.1
3,205,123	+				-0.1
3,205,123	+				-0.2
3,205,134	-				-1.0
3,205,139	+				+0.2
3,205,189	+				-0.3
3,205,189	+				-0.1
3,205,189	+				-2.0
3,205,189	+				+1.4