Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS10205 and ABZR86_RS10210 are separated by 10 nucleotides ABZR86_RS10210 and ABZR86_RS10215 are separated by 9 nucleotides ABZR86_RS10215 and ABZR86_RS10220 overlap by 4 nucleotides ABZR86_RS10220 and ABZR86_RS10225 are separated by 65 nucleotides
ABZR86_RS10205: ABZR86_RS10205 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 2,265,518 to 2,266,336
_RS10205
ABZR86_RS10210: ABZR86_RS10210 - ADP compounds hydrolase NudE, at 2,266,347 to 2,266,904
_RS10210
ABZR86_RS10215: ABZR86_RS10215 - inositol monophosphatase family protein, at 2,266,914 to 2,267,702
_RS10215
ABZR86_RS10220: ABZR86_RS10220 - type II secretion system protein N, at 2,267,699 to 2,268,478
_RS10220
ABZR86_RS10225: ABZR86_RS10225 - adenosylmethionine--8-amino-7-oxononanoate transaminase, at 2,268,544 to 2,269,911
_RS10225
Position (kb)
2266
2267
2268 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 2265.945 kb on + strand, within ABZR86_RS10205 at 2265.945 kb on + strand, within ABZR86_RS10205 at 2265.945 kb on + strand, within ABZR86_RS10205 at 2265.946 kb on - strand, within ABZR86_RS10205 at 2266.254 kb on + strand, within ABZR86_RS10205 at 2266.255 kb on - strand at 2266.255 kb on - strand at 2266.419 kb on + strand, within ABZR86_RS10210 at 2266.419 kb on + strand, within ABZR86_RS10210 at 2266.420 kb on - strand, within ABZR86_RS10210 at 2266.544 kb on + strand, within ABZR86_RS10210 at 2266.555 kb on + strand, within ABZR86_RS10210 at 2266.799 kb on - strand, within ABZR86_RS10210 at 2266.916 kb on - strand at 2266.916 kb on - strand at 2266.916 kb on - strand at 2266.923 kb on + strand at 2267.131 kb on + strand, within ABZR86_RS10215 at 2267.132 kb on - strand, within ABZR86_RS10215 at 2267.336 kb on - strand, within ABZR86_RS10215 at 2267.500 kb on + strand, within ABZR86_RS10215 at 2267.500 kb on + strand, within ABZR86_RS10215 at 2267.501 kb on - strand, within ABZR86_RS10215 at 2267.501 kb on - strand, within ABZR86_RS10215 at 2267.501 kb on - strand, within ABZR86_RS10215 at 2267.501 kb on - strand, within ABZR86_RS10215 at 2267.828 kb on - strand, within ABZR86_RS10220 at 2267.841 kb on + strand, within ABZR86_RS10220 at 2268.412 kb on - strand at 2268.412 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 2,265,945 + ABZR86_RS10205 0.52 -0.3 2,265,945 + ABZR86_RS10205 0.52 -0.8 2,265,945 + ABZR86_RS10205 0.52 -2.1 2,265,946 - ABZR86_RS10205 0.52 -2.0 2,266,254 + ABZR86_RS10205 0.90 -0.1 2,266,255 - -2.0 2,266,255 - -0.8 2,266,419 + ABZR86_RS10210 0.13 +0.8 2,266,419 + ABZR86_RS10210 0.13 +0.3 2,266,420 - ABZR86_RS10210 0.13 +0.5 2,266,544 + ABZR86_RS10210 0.35 +0.5 2,266,555 + ABZR86_RS10210 0.37 -0.1 2,266,799 - ABZR86_RS10210 0.81 -0.8 2,266,916 - -0.6 2,266,916 - -1.8 2,266,916 - -1.8 2,266,923 + -1.6 2,267,131 + ABZR86_RS10215 0.28 -2.3 2,267,132 - ABZR86_RS10215 0.28 -2.7 2,267,336 - ABZR86_RS10215 0.53 -2.8 2,267,500 + ABZR86_RS10215 0.74 -2.1 2,267,500 + ABZR86_RS10215 0.74 -3.2 2,267,501 - ABZR86_RS10215 0.74 -1.3 2,267,501 - ABZR86_RS10215 0.74 -4.6 2,267,501 - ABZR86_RS10215 0.74 -2.5 2,267,501 - ABZR86_RS10215 0.74 -3.0 2,267,828 - ABZR86_RS10220 0.17 -0.3 2,267,841 + ABZR86_RS10220 0.18 +0.2 2,268,412 - -0.5 2,268,412 - -0.2
Or see this region's nucleotide sequence