Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS06145 and ABZR86_RS06150 overlap by 4 nucleotides ABZR86_RS06150 and ABZR86_RS06155 overlap by 1 nucleotides ABZR86_RS06155 and ABZR86_RS06160 are separated by 7 nucleotides
ABZR86_RS06145: ABZR86_RS06145 - endolytic transglycosylase MltG, at 1,378,404 to 1,379,441
_RS06145
ABZR86_RS06150: ABZR86_RS06150 - aminodeoxychorismate lyase, at 1,379,438 to 1,380,256
_RS06150
ABZR86_RS06155: ABZR86_RS06155 - aminodeoxychorismate synthase component I, at 1,380,256 to 1,381,605
_RS06155
ABZR86_RS06160: ABZR86_RS06160 - beta-ketoacyl-ACP synthase II, at 1,381,613 to 1,382,851
_RS06160
Position (kb) 1380
1381
1382 Strain fitness (log2 ratio) -2
-1
0
1 at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.442 kb on - strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.511 kb on + strand at 1379.512 kb on - strand at 1379.512 kb on - strand at 1379.512 kb on - strand at 1379.512 kb on - strand at 1379.512 kb on - strand at 1379.512 kb on - strand at 1379.967 kb on + strand, within ABZR86_RS06150 at 1379.968 kb on - strand, within ABZR86_RS06150 at 1379.968 kb on - strand, within ABZR86_RS06150 at 1379.968 kb on - strand, within ABZR86_RS06150 at 1380.032 kb on + strand, within ABZR86_RS06150 at 1380.090 kb on - strand, within ABZR86_RS06150 at 1380.437 kb on + strand, within ABZR86_RS06155 at 1380.438 kb on - strand, within ABZR86_RS06155 at 1380.438 kb on - strand, within ABZR86_RS06155 at 1380.456 kb on - strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.623 kb on + strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.624 kb on - strand, within ABZR86_RS06155 at 1380.932 kb on + strand, within ABZR86_RS06155 at 1381.003 kb on - strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.292 kb on + strand, within ABZR86_RS06155 at 1381.293 kb on - strand, within ABZR86_RS06155 at 1381.293 kb on - strand, within ABZR86_RS06155
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 1,379,442 - +0.1 1,379,442 - +0.2 1,379,442 - +0.9 1,379,442 - -0.3 1,379,442 - -0.3 1,379,442 - -0.7 1,379,442 - -0.3 1,379,442 - +0.4 1,379,442 - +0.0 1,379,511 + +0.6 1,379,511 + -0.2 1,379,511 + +0.8 1,379,511 + +0.9 1,379,511 + +1.7 1,379,511 + -2.6 1,379,511 + +1.5 1,379,511 + -0.0 1,379,512 - -0.1 1,379,512 - -0.6 1,379,512 - -0.2 1,379,512 - -1.2 1,379,512 - +0.2 1,379,512 - -0.6 1,379,967 + ABZR86_RS06150 0.65 -0.5 1,379,968 - ABZR86_RS06150 0.65 -0.2 1,379,968 - ABZR86_RS06150 0.65 +0.1 1,379,968 - ABZR86_RS06150 0.65 +0.7 1,380,032 + ABZR86_RS06150 0.73 +1.3 1,380,090 - ABZR86_RS06150 0.80 +0.9 1,380,437 + ABZR86_RS06155 0.13 +0.1 1,380,438 - ABZR86_RS06155 0.13 +0.2 1,380,438 - ABZR86_RS06155 0.13 +0.4 1,380,456 - ABZR86_RS06155 0.15 -0.3 1,380,623 + ABZR86_RS06155 0.27 +0.4 1,380,623 + ABZR86_RS06155 0.27 +0.7 1,380,623 + ABZR86_RS06155 0.27 +0.1 1,380,623 + ABZR86_RS06155 0.27 -0.0 1,380,623 + ABZR86_RS06155 0.27 +0.2 1,380,623 + ABZR86_RS06155 0.27 -0.4 1,380,623 + ABZR86_RS06155 0.27 -0.4 1,380,624 - ABZR86_RS06155 0.27 -0.6 1,380,624 - ABZR86_RS06155 0.27 -1.4 1,380,624 - ABZR86_RS06155 0.27 +0.8 1,380,624 - ABZR86_RS06155 0.27 +0.7 1,380,624 - ABZR86_RS06155 0.27 +1.0 1,380,624 - ABZR86_RS06155 0.27 +1.1 1,380,624 - ABZR86_RS06155 0.27 +0.5 1,380,624 - ABZR86_RS06155 0.27 -0.0 1,380,624 - ABZR86_RS06155 0.27 +0.3 1,380,932 + ABZR86_RS06155 0.50 -1.2 1,381,003 - ABZR86_RS06155 0.55 -0.3 1,381,292 + ABZR86_RS06155 0.77 +0.3 1,381,292 + ABZR86_RS06155 0.77 +1.7 1,381,292 + ABZR86_RS06155 0.77 +0.1 1,381,292 + ABZR86_RS06155 0.77 +1.6 1,381,293 - ABZR86_RS06155 0.77 +0.6 1,381,293 - ABZR86_RS06155 0.77 -1.6
Or see this region's nucleotide sequence