Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS04045 and ABZR86_RS04050 are separated by 146 nucleotides ABZR86_RS04050 and ABZR86_RS04055 are separated by 121 nucleotides
ABZR86_RS04045: ABZR86_RS04045 - sialidase family protein, at 890,245 to 891,276
_RS04045
ABZR86_RS04050: ABZR86_RS04050 - DMT family transporter, at 891,423 to 892,286
_RS04050
ABZR86_RS04055: ABZR86_RS04055 - PLP-dependent aminotransferase family protein, at 892,408 to 893,799
_RS04055
Position (kb) 891
892
893 Strain fitness (log2 ratio) -2
-1
0
1
2 at 890.446 kb on + strand, within ABZR86_RS04045 at 890.495 kb on + strand, within ABZR86_RS04045 at 890.495 kb on + strand, within ABZR86_RS04045 at 890.955 kb on - strand, within ABZR86_RS04045 at 891.097 kb on + strand, within ABZR86_RS04045 at 891.396 kb on + strand at 891.397 kb on - strand at 891.424 kb on + strand at 891.433 kb on + strand at 891.434 kb on - strand at 891.434 kb on - strand at 891.434 kb on - strand at 891.477 kb on + strand at 891.478 kb on - strand at 891.478 kb on - strand at 891.575 kb on + strand, within ABZR86_RS04050 at 891.575 kb on + strand, within ABZR86_RS04050 at 891.640 kb on + strand, within ABZR86_RS04050 at 891.640 kb on + strand, within ABZR86_RS04050 at 891.640 kb on + strand, within ABZR86_RS04050 at 891.640 kb on + strand, within ABZR86_RS04050 at 891.641 kb on - strand, within ABZR86_RS04050 at 891.641 kb on - strand, within ABZR86_RS04050 at 891.877 kb on + strand, within ABZR86_RS04050 at 891.877 kb on + strand, within ABZR86_RS04050 at 891.878 kb on - strand, within ABZR86_RS04050 at 891.968 kb on + strand, within ABZR86_RS04050 at 891.968 kb on + strand, within ABZR86_RS04050 at 891.969 kb on - strand, within ABZR86_RS04050 at 892.251 kb on - strand at 892.376 kb on - strand at 892.477 kb on + strand at 892.478 kb on - strand at 892.558 kb on + strand, within ABZR86_RS04055 at 892.559 kb on - strand, within ABZR86_RS04055 at 892.559 kb on - strand, within ABZR86_RS04055 at 892.612 kb on + strand, within ABZR86_RS04055 at 892.612 kb on + strand, within ABZR86_RS04055 at 892.612 kb on + strand, within ABZR86_RS04055 at 892.612 kb on + strand, within ABZR86_RS04055 at 892.612 kb on + strand, within ABZR86_RS04055 at 892.613 kb on - strand, within ABZR86_RS04055 at 892.724 kb on + strand, within ABZR86_RS04055 at 892.724 kb on + strand, within ABZR86_RS04055 at 892.725 kb on - strand, within ABZR86_RS04055 at 892.765 kb on + strand, within ABZR86_RS04055 at 892.765 kb on + strand, within ABZR86_RS04055 at 892.765 kb on + strand, within ABZR86_RS04055 at 892.765 kb on + strand, within ABZR86_RS04055 at 892.831 kb on + strand, within ABZR86_RS04055 at 892.832 kb on - strand, within ABZR86_RS04055 at 892.867 kb on + strand, within ABZR86_RS04055 at 892.867 kb on + strand, within ABZR86_RS04055 at 892.867 kb on + strand, within ABZR86_RS04055 at 893.089 kb on - strand, within ABZR86_RS04055 at 893.134 kb on + strand, within ABZR86_RS04055 at 893.134 kb on + strand, within ABZR86_RS04055 at 893.135 kb on - strand, within ABZR86_RS04055
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 890,446 + ABZR86_RS04045 0.19 +0.2 890,495 + ABZR86_RS04045 0.24 +0.6 890,495 + ABZR86_RS04045 0.24 -1.2 890,955 - ABZR86_RS04045 0.69 -0.2 891,097 + ABZR86_RS04045 0.83 +0.7 891,396 + -1.8 891,397 - -1.3 891,424 + +0.6 891,433 + -1.4 891,434 - +0.9 891,434 - +0.3 891,434 - +0.3 891,477 + -0.0 891,478 - +1.1 891,478 - -1.0 891,575 + ABZR86_RS04050 0.18 -0.2 891,575 + ABZR86_RS04050 0.18 +0.1 891,640 + ABZR86_RS04050 0.25 -0.4 891,640 + ABZR86_RS04050 0.25 +0.9 891,640 + ABZR86_RS04050 0.25 +1.5 891,640 + ABZR86_RS04050 0.25 +0.6 891,641 - ABZR86_RS04050 0.25 -0.9 891,641 - ABZR86_RS04050 0.25 -1.5 891,877 + ABZR86_RS04050 0.53 +0.3 891,877 + ABZR86_RS04050 0.53 -0.2 891,878 - ABZR86_RS04050 0.53 -0.1 891,968 + ABZR86_RS04050 0.63 -0.3 891,968 + ABZR86_RS04050 0.63 -1.0 891,969 - ABZR86_RS04050 0.63 +0.2 892,251 - +0.9 892,376 - +1.8 892,477 + -0.1 892,478 - -0.4 892,558 + ABZR86_RS04055 0.11 +0.8 892,559 - ABZR86_RS04055 0.11 -0.2 892,559 - ABZR86_RS04055 0.11 +0.5 892,612 + ABZR86_RS04055 0.15 -1.0 892,612 + ABZR86_RS04055 0.15 +0.8 892,612 + ABZR86_RS04055 0.15 +0.5 892,612 + ABZR86_RS04055 0.15 +0.1 892,612 + ABZR86_RS04055 0.15 -0.7 892,613 - ABZR86_RS04055 0.15 +0.4 892,724 + ABZR86_RS04055 0.23 -0.8 892,724 + ABZR86_RS04055 0.23 -0.9 892,725 - ABZR86_RS04055 0.23 -1.2 892,765 + ABZR86_RS04055 0.26 -0.1 892,765 + ABZR86_RS04055 0.26 +1.3 892,765 + ABZR86_RS04055 0.26 -0.4 892,765 + ABZR86_RS04055 0.26 -0.8 892,831 + ABZR86_RS04055 0.30 -1.3 892,832 - ABZR86_RS04055 0.30 +0.1 892,867 + ABZR86_RS04055 0.33 +0.0 892,867 + ABZR86_RS04055 0.33 +0.7 892,867 + ABZR86_RS04055 0.33 -0.2 893,089 - ABZR86_RS04055 0.49 -0.7 893,134 + ABZR86_RS04055 0.52 +0.6 893,134 + ABZR86_RS04055 0.52 -0.2 893,135 - ABZR86_RS04055 0.52 +0.3
Or see this region's nucleotide sequence