Experiment: pyruvate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS02570 and ABZR86_RS02575 are separated by 311 nucleotides ABZR86_RS02575 and ABZR86_RS02580 are separated by 4 nucleotides ABZR86_RS02580 and ABZR86_RS02585 are separated by 8 nucleotides
ABZR86_RS02570: ABZR86_RS02570 - HNH endonuclease signature motif containing protein, at 522,040 to 522,324
_RS02570
ABZR86_RS02575: ABZR86_RS02575 - hypothetical protein, at 522,636 to 522,923
_RS02575
ABZR86_RS02580: ABZR86_RS02580 - terminase large subunit, at 522,928 to 524,613
_RS02580
ABZR86_RS02585: ABZR86_RS02585 - phage portal protein, at 524,622 to 525,902
_RS02585
Position (kb) 522
523
524
525 Strain fitness (log2 ratio) -1
0
1 at 521.952 kb on + strand at 521.952 kb on + strand at 521.953 kb on - strand at 521.953 kb on - strand at 521.953 kb on - strand at 521.994 kb on + strand at 521.995 kb on - strand at 522.194 kb on + strand, within ABZR86_RS02570 at 522.194 kb on + strand, within ABZR86_RS02570 at 522.195 kb on - strand, within ABZR86_RS02570 at 522.195 kb on - strand, within ABZR86_RS02570 at 522.344 kb on + strand at 522.376 kb on - strand at 522.376 kb on - strand at 522.401 kb on + strand at 522.402 kb on - strand at 522.467 kb on + strand at 522.729 kb on + strand, within ABZR86_RS02575 at 522.729 kb on + strand, within ABZR86_RS02575 at 522.729 kb on + strand, within ABZR86_RS02575 at 522.730 kb on - strand, within ABZR86_RS02575 at 522.749 kb on + strand, within ABZR86_RS02575 at 522.749 kb on + strand, within ABZR86_RS02575 at 522.834 kb on - strand, within ABZR86_RS02575 at 522.927 kb on + strand at 522.927 kb on + strand at 522.927 kb on + strand at 522.927 kb on + strand at 522.927 kb on + strand at 522.928 kb on - strand at 522.928 kb on - strand at 522.928 kb on - strand at 522.928 kb on - strand at 523.004 kb on - strand at 523.052 kb on + strand at 523.053 kb on - strand at 523.103 kb on + strand, within ABZR86_RS02580 at 523.104 kb on - strand, within ABZR86_RS02580 at 523.104 kb on - strand, within ABZR86_RS02580 at 523.309 kb on + strand, within ABZR86_RS02580 at 523.687 kb on + strand, within ABZR86_RS02580 at 523.687 kb on + strand, within ABZR86_RS02580 at 523.688 kb on - strand, within ABZR86_RS02580 at 523.724 kb on - strand, within ABZR86_RS02580 at 523.791 kb on + strand, within ABZR86_RS02580 at 523.792 kb on - strand, within ABZR86_RS02580 at 524.096 kb on + strand, within ABZR86_RS02580 at 524.096 kb on + strand, within ABZR86_RS02580 at 524.097 kb on - strand, within ABZR86_RS02580 at 524.097 kb on - strand, within ABZR86_RS02580 at 524.291 kb on + strand, within ABZR86_RS02580 at 524.291 kb on + strand, within ABZR86_RS02580 at 524.584 kb on + strand at 524.585 kb on - strand at 524.760 kb on + strand, within ABZR86_RS02585 at 524.761 kb on - strand, within ABZR86_RS02585 at 524.761 kb on - strand, within ABZR86_RS02585 at 524.971 kb on - strand, within ABZR86_RS02585 at 524.971 kb on - strand, within ABZR86_RS02585 at 525.021 kb on + strand, within ABZR86_RS02585 at 525.022 kb on - strand, within ABZR86_RS02585 at 525.116 kb on + strand, within ABZR86_RS02585 at 525.116 kb on + strand, within ABZR86_RS02585 at 525.117 kb on - strand, within ABZR86_RS02585 at 525.117 kb on - strand, within ABZR86_RS02585 at 525.117 kb on - strand, within ABZR86_RS02585 at 525.120 kb on + strand, within ABZR86_RS02585 at 525.121 kb on - strand, within ABZR86_RS02585 at 525.121 kb on - strand, within ABZR86_RS02585 at 525.221 kb on + strand, within ABZR86_RS02585 at 525.348 kb on + strand, within ABZR86_RS02585 at 525.381 kb on + strand, within ABZR86_RS02585 at 525.381 kb on + strand, within ABZR86_RS02585 at 525.473 kb on + strand, within ABZR86_RS02585 at 525.600 kb on + strand, within ABZR86_RS02585
Per-strain Table
Position Strand Gene LocusTag Fraction pyruvate (C) remove 521,952 + -0.9 521,952 + -0.9 521,953 - -0.2 521,953 - +0.1 521,953 - +0.3 521,994 + +0.9 521,995 - +0.6 522,194 + ABZR86_RS02570 0.54 +0.3 522,194 + ABZR86_RS02570 0.54 +0.4 522,195 - ABZR86_RS02570 0.54 +0.1 522,195 - ABZR86_RS02570 0.54 +0.6 522,344 + +0.2 522,376 - +0.4 522,376 - -1.6 522,401 + +0.3 522,402 - +0.6 522,467 + +0.6 522,729 + ABZR86_RS02575 0.32 -0.1 522,729 + ABZR86_RS02575 0.32 +0.6 522,729 + ABZR86_RS02575 0.32 -0.2 522,730 - ABZR86_RS02575 0.33 +1.2 522,749 + ABZR86_RS02575 0.39 -0.5 522,749 + ABZR86_RS02575 0.39 -1.4 522,834 - ABZR86_RS02575 0.69 -0.2 522,927 + -0.3 522,927 + +0.2 522,927 + -0.4 522,927 + -1.5 522,927 + +0.2 522,928 - -0.4 522,928 - -0.8 522,928 - +0.1 522,928 - +0.4 523,004 - -0.4 523,052 + -0.4 523,053 - +0.4 523,103 + ABZR86_RS02580 0.10 +0.3 523,104 - ABZR86_RS02580 0.10 -0.1 523,104 - ABZR86_RS02580 0.10 -0.5 523,309 + ABZR86_RS02580 0.23 -1.3 523,687 + ABZR86_RS02580 0.45 -0.3 523,687 + ABZR86_RS02580 0.45 -0.6 523,688 - ABZR86_RS02580 0.45 +1.2 523,724 - ABZR86_RS02580 0.47 +0.6 523,791 + ABZR86_RS02580 0.51 +0.9 523,792 - ABZR86_RS02580 0.51 -0.7 524,096 + ABZR86_RS02580 0.69 +0.9 524,096 + ABZR86_RS02580 0.69 +0.7 524,097 - ABZR86_RS02580 0.69 -0.6 524,097 - ABZR86_RS02580 0.69 -0.4 524,291 + ABZR86_RS02580 0.81 -0.5 524,291 + ABZR86_RS02580 0.81 +1.5 524,584 + -0.2 524,585 - -0.9 524,760 + ABZR86_RS02585 0.11 -0.9 524,761 - ABZR86_RS02585 0.11 +0.4 524,761 - ABZR86_RS02585 0.11 -0.9 524,971 - ABZR86_RS02585 0.27 +0.6 524,971 - ABZR86_RS02585 0.27 +1.1 525,021 + ABZR86_RS02585 0.31 +0.9 525,022 - ABZR86_RS02585 0.31 -0.6 525,116 + ABZR86_RS02585 0.39 -0.7 525,116 + ABZR86_RS02585 0.39 -0.7 525,117 - ABZR86_RS02585 0.39 +0.2 525,117 - ABZR86_RS02585 0.39 -0.1 525,117 - ABZR86_RS02585 0.39 -0.4 525,120 + ABZR86_RS02585 0.39 -0.6 525,121 - ABZR86_RS02585 0.39 -0.1 525,121 - ABZR86_RS02585 0.39 -0.3 525,221 + ABZR86_RS02585 0.47 +0.3 525,348 + ABZR86_RS02585 0.57 -0.3 525,381 + ABZR86_RS02585 0.59 +0.5 525,381 + ABZR86_RS02585 0.59 -0.6 525,473 + ABZR86_RS02585 0.66 -0.4 525,600 + ABZR86_RS02585 0.76 -0.4
Or see this region's nucleotide sequence