Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3465

Experiment: D-Glucosamine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (C)
4,460,183	+		BT3464	0.27	-0.2
4,460,184	-		BT3464	0.27	-2.1
4,460,186	-		BT3464	0.27	-0.1
4,460,186	-		BT3464	0.27	-1.6
4,460,249	+		BT3464	0.32	-0.7
4,460,441	-		BT3464	0.47	+0.9
4,460,441	-		BT3464	0.47	-1.9
4,460,556	+		BT3464	0.56	+0.4
4,460,762	-		BT3464	0.71	-0.8
4,460,775	-		BT3464	0.72	+0.8
4,460,775	-		BT3464	0.72	-0.4
4,460,777	-		BT3464	0.72	-3.3
4,460,802	-		BT3464	0.74	+0.2
4,460,854	-		BT3464	0.78	-2.5
4,460,975	-		BT3464	0.88	+0.1
4,461,040	-				+0.5
4,461,073	-				-1.0
4,461,140	-				-0.3
4,461,144	-				-3.1
4,461,167	+				-0.8
4,461,273	+				+0.6
4,461,274	-				-0.4
4,461,274	-				-0.4
4,461,279	-				-1.3
4,461,279	-				+0.8
4,461,288	+				+0.0
4,461,289	-				-2.1
4,461,289	-				-1.6
4,461,290	+				+0.0
4,461,291	-				-1.6
4,461,302	-				+0.6
4,461,360	+				+0.8
4,461,441	+				+0.0
4,461,442	-				-1.8
4,461,443	+				-0.1
4,461,469	+				+0.5
4,461,469	+				-0.4
4,461,469	+				-1.4
4,461,469	+				+1.5
4,461,471	+				-0.3
4,461,471	+				-1.6
4,461,476	-				+0.1
4,461,516	+				+0.6
4,461,533	-				-0.1
4,461,560	+				+0.7
4,461,560	+				-0.1
4,461,561	-				-0.2
4,461,648	+		BT3465	0.12	+0.4
4,461,688	+		BT3465	0.13	-2.2
4,461,706	+		BT3465	0.14	-0.8
4,461,719	+		BT3465	0.14	+0.1
4,461,801	+		BT3465	0.16	-1.2
4,461,813	-		BT3465	0.16	-0.0
4,461,822	-		BT3465	0.16	+0.5
4,461,907	+		BT3465	0.18	+0.7
4,461,908	-		BT3465	0.19	-0.2
4,461,908	-		BT3465	0.19	-2.1
4,461,998	-		BT3465	0.21	+1.1
4,462,002	-		BT3465	0.21	-2.1
4,462,038	+		BT3465	0.22	-0.1
4,462,142	-		BT3465	0.24	-0.1
4,462,143	+		BT3465	0.24	-1.3
4,462,143	+		BT3465	0.24	-0.3
4,462,144	-		BT3465	0.24	-0.6
4,462,174	+		BT3465	0.25	-0.4
4,462,175	-		BT3465	0.25	-0.4
4,462,186	+		BT3465	0.25	+0.0
4,462,277	+		BT3465	0.28	+0.1
4,462,280	-		BT3465	0.28	-0.6
4,462,284	+		BT3465	0.28	-1.0
4,462,320	+		BT3465	0.29	-0.5
4,462,331	+		BT3465	0.29	-3.2
4,462,331	+		BT3465	0.29	-1.0
4,462,332	-		BT3465	0.29	-1.5
4,462,345	+		BT3465	0.29	-1.6
4,462,392	+		BT3465	0.31	+0.1
4,462,397	-		BT3465	0.31	-1.6
4,462,409	+		BT3465	0.31	+0.5
4,462,410	-		BT3465	0.31	+0.2
4,462,410	-		BT3465	0.31	+0.1
4,462,447	+		BT3465	0.32	-1.4
4,462,494	-		BT3465	0.33	-0.8
4,462,502	+		BT3465	0.33	-0.5
4,462,503	-		BT3465	0.33	-0.2
4,462,504	+		BT3465	0.33	-0.7
4,462,505	-		BT3465	0.33	+0.2
4,462,505	-		BT3465	0.33	-0.6
4,462,507	-		BT3465	0.33	-0.9
4,462,507	-		BT3465	0.33	+0.1
4,462,560	+		BT3465	0.35	+1.0
4,462,560	+		BT3465	0.35	+0.7
4,462,561	-		BT3465	0.35	+0.2
4,462,623	+		BT3465	0.36	+1.1
4,462,625	+		BT3465	0.36	-1.2
4,462,625	+		BT3465	0.36	+0.0
4,462,626	-		BT3465	0.36	+0.2
4,462,626	-		BT3465	0.36	+0.9
4,462,626	-		BT3465	0.36	-0.3
4,462,626	-		BT3465	0.36	-0.5
4,462,627	+		BT3465	0.36	-0.7
4,462,627	+		BT3465	0.36	-1.6
4,462,628	-		BT3465	0.36	-1.4
4,462,635	+		BT3465	0.37	-0.4
4,462,635	+		BT3465	0.37	+1.0
4,462,636	-		BT3465	0.37	+0.0
4,462,636	-		BT3465	0.37	+0.3
4,462,640	-		BT3465	0.37	-0.0
4,462,640	-		BT3465	0.37	-2.1
4,462,640	-		BT3465	0.37	-1.0
4,462,640	-		BT3465	0.37	+1.0
4,462,746	+		BT3465	0.39	-0.7
4,462,747	-		BT3465	0.39	-1.8
4,462,779	+		BT3465	0.40	+0.2
4,462,780	-		BT3465	0.40	+0.5
4,462,820	+		BT3465	0.41	-0.9
4,462,820	+		BT3465	0.41	+0.1
4,462,821	-		BT3465	0.41	+0.4
4,462,821	-		BT3465	0.41	+0.5
4,462,888	+		BT3465	0.43	+2.1
4,463,020	-		BT3465	0.46	-2.9
4,463,119	+		BT3465	0.49	-1.0
4,463,133	-		BT3465	0.49	-0.4
4,463,134	+		BT3465	0.49	-0.1
4,463,134	+		BT3465	0.49	-3.0
4,463,213	-		BT3465	0.51	-0.7
4,463,213	-		BT3465	0.51	+0.7
4,463,213	-		BT3465	0.51	-0.2
4,463,281	+		BT3465	0.53	+0.1
4,463,305	+		BT3465	0.53	-0.6
4,463,305	+		BT3465	0.53	+1.0
4,463,318	+		BT3465	0.53	-0.3
4,463,328	-		BT3465	0.54	+0.6
4,463,344	-		BT3465	0.54	-1.0
4,463,451	+		BT3465	0.57	-0.5
4,463,469	+		BT3465	0.57	-0.6
4,463,506	-		BT3465	0.58	+0.6
4,463,511	+		BT3465	0.58	-1.8
4,463,512	-		BT3465	0.58	+2.3
4,463,512	-		BT3465	0.58	+0.7
4,463,574	+		BT3465	0.60	+0.6
4,463,578	+		BT3465	0.60	+0.2
4,463,578	+		BT3465	0.60	-0.9
4,463,579	-		BT3465	0.60	+0.7
4,463,628	+		BT3465	0.61	+0.1
4,463,669	+		BT3465	0.62	+1.2
4,463,669	+		BT3465	0.62	-0.2
4,463,670	-		BT3465	0.62	+1.0
4,463,670	-		BT3465	0.62	+1.7
4,463,670	-		BT3465	0.62	-0.9
4,463,670	-		BT3465	0.62	-1.5
4,463,746	+		BT3465	0.64	+0.4
4,463,747	-		BT3465	0.64	-0.5
4,463,776	+		BT3465	0.65	-2.4
4,463,850	-		BT3465	0.67	+0.5
4,463,882	+		BT3465	0.67	+0.4
4,463,882	+		BT3465	0.67	-0.7
4,463,883	-		BT3465	0.67	-0.4
4,463,883	-		BT3465	0.67	-0.8
4,463,886	+		BT3465	0.68	+1.2
4,463,886	+		BT3465	0.68	-0.2
4,463,887	-		BT3465	0.68	+1.0
4,463,931	-		BT3465	0.69	-0.1
4,463,957	+		BT3465	0.69	+1.3
4,463,957	+		BT3465	0.69	-0.9
4,463,990	+		BT3465	0.70	-1.3
4,464,077	+		BT3465	0.72	+0.5
4,464,077	+		BT3465	0.72	-0.6
4,464,078	-		BT3465	0.72	-3.4
4,464,080	-		BT3465	0.72	-0.6
4,464,080	-		BT3465	0.72	-0.2
4,464,142	+		BT3465	0.74	-0.9
4,464,159	+		BT3465	0.74	-0.0
4,464,159	+		BT3465	0.74	-1.5
4,464,160	-		BT3465	0.74	-1.6
4,464,180	+		BT3465	0.75	+0.8
4,464,181	-		BT3465	0.75	-0.3
4,464,276	-		BT3465	0.77	-0.2
4,464,278	+		BT3465	0.77	-0.5
4,464,279	-		BT3465	0.77	-0.5
4,464,503	+		BT3465	0.83	-0.2
4,464,521	+		BT3465	0.83	+0.7
4,464,521	+		BT3465	0.83	+0.1
4,464,522	-		BT3465	0.83	+0.0
4,464,601	+		BT3465	0.85	-0.9
4,464,623	+		BT3465	0.86	+0.0
4,464,623	+		BT3465	0.86	+0.5
4,464,623	+		BT3465	0.86	-1.8
4,464,652	-		BT3465	0.86	-0.4
4,464,774	+		BT3465	0.89	+0.8
4,464,900	+				+0.2
4,464,950	+				+0.4
4,464,982	+				+0.4
4,465,039	-				+0.5
4,465,109	-				-3.8
4,465,129	+				-0.1
4,465,163	+				+1.0
4,465,200	+				+1.1
4,465,256	+				+0.0
4,465,257	-				-3.3
4,465,257	-				-0.4
4,465,259	-				-0.8
4,465,259	-				+0.6
4,465,304	+				-0.6
4,465,322	+				-0.5
4,465,337	-				-0.1
4,465,466	+				-0.7
4,465,503	-		BT3466	0.12	+0.0
4,465,504	+		BT3466	0.12	+1.0
4,465,553	-		BT3466	0.39	-0.3
4,465,554	+		BT3466	0.39	-1.1
4,465,565	+		BT3466	0.45	+0.0
4,465,586	+		BT3466	0.56	-2.2
4,465,614	-		BT3466	0.72	-0.4
4,465,620	-		BT3466	0.75	+0.4
4,465,688	-				-0.5
4,465,886	+				-0.5
4,465,887	-				+1.3
4,465,943	-		BT3467	0.14	-0.8
4,465,946	+		BT3467	0.14	-1.2
4,465,947	-		BT3467	0.15	+0.2
4,465,967	-		BT3467	0.16	-1.3
4,465,967	-		BT3467	0.16	+0.3
4,465,977	+		BT3467	0.17	+1.6
4,465,980	-		BT3467	0.18	+0.0
4,466,102	-		BT3467	0.29	-1.4
4,466,109	-		BT3467	0.29	+1.2
4,466,109	-		BT3467	0.29	-0.9
4,466,115	-		BT3467	0.30	+0.8
4,466,115	-		BT3467	0.30	+1.2
4,466,143	+		BT3467	0.32	-0.5
4,466,143	+		BT3467	0.32	+0.5
4,466,143	+		BT3467	0.32	+0.6
4,466,144	-		BT3467	0.33	+0.2