Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11250

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
2,782,167	-		CA265_RS11245	0.12	-0.1
2,782,192	+		CA265_RS11245	0.15	-0.7
2,782,192	+		CA265_RS11245	0.15	-1.3
2,782,257	+		CA265_RS11245	0.23	+0.1
2,782,258	-		CA265_RS11245	0.23	-0.1
2,782,345	+		CA265_RS11245	0.33	+0.2
2,782,349	+		CA265_RS11245	0.34	+0.3
2,782,388	-		CA265_RS11245	0.38	+0.1
2,782,454	+		CA265_RS11245	0.46	-0.2
2,782,455	-		CA265_RS11245	0.46	-0.3
2,782,458	+		CA265_RS11245	0.46	-0.3
2,782,458	+		CA265_RS11245	0.46	-0.5
2,782,578	-		CA265_RS11245	0.61	+0.4
2,782,598	+		CA265_RS11245	0.63	-0.1
2,782,603	+		CA265_RS11245	0.63	-0.3
2,782,603	+		CA265_RS11245	0.63	+0.2
2,782,603	+		CA265_RS11245	0.63	+0.1
2,782,604	-		CA265_RS11245	0.64	-0.4
2,782,604	-				-0.7
2,782,604	-		CA265_RS11245	0.64	+2.0
2,782,607	-		CA265_RS11245	0.64	-0.4
2,782,627	+		CA265_RS11245	0.66	-0.9
2,782,628	-		CA265_RS11245	0.66	-1.5
2,782,628	-		CA265_RS11245	0.66	-0.8
2,782,729	+		CA265_RS11245	0.78	-0.7
2,782,881	-				-0.4
2,782,884	-				+0.3
2,782,916	-				-0.0
2,782,916	-				+0.4
2,782,916	-				+0.1
2,783,001	-				-0.8
2,783,024	-				+0.0
2,783,134	-				+0.0
2,783,162	+				-0.1
2,783,185	+				-0.7
2,783,199	-				-2.2
2,783,325	-		CA265_RS11250	0.19	+0.1
2,783,329	+		CA265_RS11250	0.19	+0.3
2,783,334	+		CA265_RS11250	0.20	+1.1
2,783,443	-		CA265_RS11250	0.30	+0.2
2,783,515	+		CA265_RS11250	0.37	-0.4
2,783,517	+		CA265_RS11250	0.37	+0.9
2,783,518	-		CA265_RS11250	0.37	+0.4
2,783,533	+		CA265_RS11250	0.38	+0.6
2,783,629	+		CA265_RS11250	0.47	-0.4
2,783,629	+		CA265_RS11250	0.47	+0.2
2,783,637	-		CA265_RS11250	0.48	+0.1
2,783,777	+		CA265_RS11250	0.61	-1.2
2,783,806	+		CA265_RS11250	0.64	-0.3
2,783,807	-		CA265_RS11250	0.64	+0.3
2,783,830	+		CA265_RS11250	0.66	+0.6
2,783,831	-		CA265_RS11250	0.66	-1.5
2,783,875	+		CA265_RS11250	0.70	+0.4
2,783,925	-		CA265_RS11250	0.75	+0.7
2,783,951	+		CA265_RS11250	0.77	-0.8
2,784,117	-				-0.4
2,784,117	-				+0.1
2,784,138	+				-1.1
2,784,153	-				-0.3
2,784,257	+				-0.8
2,784,437	-		CA265_RS11255	0.17	+1.0
2,784,465	-		CA265_RS11255	0.19	+0.1
2,784,465	-		CA265_RS11255	0.19	-0.1
2,784,465	-		CA265_RS11255	0.19	-0.2
2,784,497	+		CA265_RS11255	0.22	+0.1
2,784,556	-		CA265_RS11255	0.27	-0.1
2,784,565	+		CA265_RS11255	0.28	-0.4
2,784,623	+		CA265_RS11255	0.33	-0.2
2,784,627	+		CA265_RS11255	0.33	-0.7
2,784,651	+		CA265_RS11255	0.35	+0.0
2,784,670	-		CA265_RS11255	0.36	+0.1
2,784,718	+				-0.7
2,784,773	+		CA265_RS11255	0.45	-0.0
2,784,827	-		CA265_RS11255	0.49	-0.7
2,784,884	+		CA265_RS11255	0.54	+0.5
2,784,917	-		CA265_RS11255	0.57	+0.4
2,784,994	+		CA265_RS11255	0.63	-0.2
2,785,114	-		CA265_RS11255	0.73	+1.1
2,785,114	-		CA265_RS11255	0.73	+1.5
2,785,186	-		CA265_RS11255	0.79	+0.5