Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS10280

Experiment: R2A with Dimethyl Sulfoxide 7.5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 7.5 vol%
2,535,151	+		CA265_RS10275	0.52	-0.6
2,535,151	+		CA265_RS10275	0.52	-0.4
2,535,152	-		CA265_RS10275	0.52	+0.0
2,535,153	+		CA265_RS10275	0.52	+0.4
2,535,404	+		CA265_RS10275	0.64	+0.1
2,535,404	+		CA265_RS10275	0.64	-2.1
2,535,405	-		CA265_RS10275	0.64	-1.0
2,535,408	+		CA265_RS10275	0.65	-0.4
2,535,467	+		CA265_RS10275	0.67	+0.3
2,535,467	+		CA265_RS10275	0.67	+0.4
2,535,468	-		CA265_RS10275	0.67	-1.2
2,535,468	-		CA265_RS10275	0.67	-0.7
2,535,469	+		CA265_RS10275	0.67	+0.0
2,535,469	+		CA265_RS10275	0.67	+0.8
2,535,469	+		CA265_RS10275	0.67	-1.2
2,535,470	-		CA265_RS10275	0.68	-0.0
2,535,470	-		CA265_RS10275	0.68	+0.3
2,535,470	-		CA265_RS10275	0.68	-0.9
2,535,470	-		CA265_RS10275	0.68	+0.2
2,535,631	-		CA265_RS10275	0.75	-0.3
2,535,638	-		CA265_RS10275	0.76	-0.2
2,535,643	+		CA265_RS10275	0.76	+0.4
2,535,812	-		CA265_RS10275	0.84	+0.4
2,535,850	+		CA265_RS10275	0.86	+0.9
2,535,870	-		CA265_RS10275	0.87	-0.1
2,535,891	+		CA265_RS10275	0.88	+0.6
2,535,896	-		CA265_RS10275	0.88	+0.3
2,536,106	-				+2.0
2,536,106	-				+0.6
2,536,191	+				+0.2
2,536,222	+				+0.6
2,536,236	-				+0.1
2,536,252	-				+0.9
2,536,340	+				-0.7
2,536,376	+		CA265_RS10280	0.10	-0.4
2,536,376	+		CA265_RS10280	0.10	-1.8
2,536,466	+		CA265_RS10280	0.14	-0.0
2,536,485	-		CA265_RS10280	0.15	-0.2
2,536,485	-		CA265_RS10280	0.15	-0.4
2,536,491	+		CA265_RS10280	0.15	-0.2
2,536,512	-		CA265_RS10280	0.16	+0.4
2,536,556	+		CA265_RS10280	0.18	+1.0
2,536,557	-		CA265_RS10280	0.18	+0.2
2,536,663	+		CA265_RS10280	0.23	-1.7
2,536,675	-		CA265_RS10280	0.23	+0.5
2,536,675	-		CA265_RS10280	0.23	+0.2
2,536,686	-		CA265_RS10280	0.23	-0.1
2,536,755	+		CA265_RS10280	0.26	-0.4
2,536,756	-		CA265_RS10280	0.26	-0.1
2,536,843	-		CA265_RS10280	0.30	+0.0
2,536,924	+		CA265_RS10280	0.34	-1.4
2,537,003	-		CA265_RS10280	0.37	+0.4
2,537,161	-		CA265_RS10280	0.44	+1.6
2,537,161	-		CA265_RS10280	0.44	+0.0
2,537,245	-		CA265_RS10280	0.47	-0.8
2,537,313	+		CA265_RS10280	0.50	+0.1
2,537,314	-		CA265_RS10280	0.50	-0.8
2,537,314	-		CA265_RS10280	0.50	+1.4
2,537,325	+		CA265_RS10280	0.51	+1.2
2,537,325	+		CA265_RS10280	0.51	-1.4
2,537,325	+		CA265_RS10280	0.51	-0.2
2,537,326	-		CA265_RS10280	0.51	+0.1
2,537,351	+		CA265_RS10280	0.52	+1.6
2,537,351	+		CA265_RS10280	0.52	-2.5
2,537,354	+		CA265_RS10280	0.52	+0.1
2,537,354	+		CA265_RS10280	0.52	+2.6
2,537,409	-		CA265_RS10280	0.54	+0.8
2,537,493	+		CA265_RS10280	0.58	-0.4
2,537,500	-		CA265_RS10280	0.58	-2.0
2,537,579	+		CA265_RS10280	0.62	+0.4
2,537,580	-				+0.6
2,537,602	+		CA265_RS10280	0.63	-0.2
2,537,602	+		CA265_RS10280	0.63	+2.8
2,537,686	+		CA265_RS10280	0.66	-0.5
2,537,690	+		CA265_RS10280	0.66	+0.4
2,537,724	-		CA265_RS10280	0.68	-0.4
2,537,745	-		CA265_RS10280	0.69	-0.4
2,537,745	-		CA265_RS10280	0.69	-0.6
2,537,779	+		CA265_RS10280	0.70	+0.5
2,537,838	-		CA265_RS10280	0.73	-0.9
2,537,882	+		CA265_RS10280	0.75	-0.6
2,537,882	+		CA265_RS10280	0.75	-0.3
2,537,988	-		CA265_RS10280	0.79	+0.5
2,538,011	+		CA265_RS10280	0.80	+0.2
2,538,012	-		CA265_RS10280	0.80	+0.0
2,538,022	-		CA265_RS10280	0.81	-0.2
2,538,049	-		CA265_RS10280	0.82	-0.0
2,538,104	-		CA265_RS10280	0.84	+1.1
2,538,108	-		CA265_RS10280	0.84	+0.0
2,538,195	+		CA265_RS10280	0.88	-1.1
2,538,272	+				-0.8
2,538,275	+				-1.0
2,538,275	+				-1.6
2,538,276	-				+0.4
2,538,286	-				+0.4
2,538,286	-				+1.0
2,538,286	-				+1.2
2,538,290	+				+0.6
2,538,338	+				-0.4
2,538,383	-				+1.2
2,538,388	-				-1.2
2,538,441	+				-0.2
2,538,441	+				-0.4
2,538,442	-				-0.7
2,538,442	-				+0.2
2,538,446	+				+0.4
2,538,456	-				-0.1
2,538,494	+				+0.4
2,538,499	+				+0.3
2,538,567	-				-1.4
2,538,614	-				-0.5
2,538,634	+				+0.4
2,538,635	-				+0.7
2,538,678	+				-0.0
2,538,678	+				+1.2
2,538,731	+				+0.5
2,538,732	-				-0.2
2,538,870	+		CA265_RS10285	0.18	-0.2
2,538,870	+		CA265_RS10285	0.18	+0.6
2,538,871	-		CA265_RS10285	0.18	+0.3
2,538,953	-		CA265_RS10285	0.25	+2.0
2,538,953	-		CA265_RS10285	0.25	+1.1
2,538,970	-		CA265_RS10285	0.27	+1.1
2,538,973	+		CA265_RS10285	0.27	-1.0
2,538,973	+		CA265_RS10285	0.27	-0.0
2,538,973	+		CA265_RS10285	0.27	-0.1
2,538,974	-		CA265_RS10285	0.27	-0.6
2,538,979	-		CA265_RS10285	0.27	-0.4
2,538,979	-		CA265_RS10285	0.27	+0.0
2,538,997	+		CA265_RS10285	0.29	+0.5
2,538,998	-		CA265_RS10285	0.29	-0.1
2,538,998	-		CA265_RS10285	0.29	+1.1
2,539,008	+		CA265_RS10285	0.30	+0.1
2,539,009	-		CA265_RS10285	0.30	-1.2
2,539,009	-		CA265_RS10285	0.30	+0.0
2,539,100	+		CA265_RS10285	0.37	-0.2
2,539,101	-		CA265_RS10285	0.37	-0.6
2,539,157	-		CA265_RS10285	0.42	+0.7
2,539,233	-		CA265_RS10285	0.48	+0.2
2,539,249	-		CA265_RS10285	0.49	-0.2
2,539,251	+		CA265_RS10285	0.50	-0.2
2,539,266	+		CA265_RS10285	0.51	-0.4
2,539,269	-		CA265_RS10285	0.51	+0.1
2,539,269	-		CA265_RS10285	0.51	-0.2
2,539,284	+		CA265_RS10285	0.52	-1.1
2,539,312	-		CA265_RS10285	0.55	-1.7
2,539,324	-		CA265_RS10285	0.56	+1.9
2,539,332	+		CA265_RS10285	0.56	+0.8
2,539,338	+		CA265_RS10285	0.57	-0.9
2,539,340	+		CA265_RS10285	0.57	+0.1
2,539,419	-		CA265_RS10285	0.63	-0.1
2,539,437	-		CA265_RS10285	0.65	+0.6
2,539,463	+		CA265_RS10285	0.67	+0.1
2,539,466	-		CA265_RS10285	0.67	+0.8