Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS08925 and ABZR86_RS08930 are separated by 74 nucleotides ABZR86_RS08930 and ABZR86_RS08935 are separated by 59 nucleotides
ABZR86_RS08925: ABZR86_RS08925 - glutathione-disulfide reductase, at 1,990,201 to 1,991,547
_RS08925
ABZR86_RS08930: ABZR86_RS08930 - FAD-dependent oxidoreductase, at 1,991,622 to 1,992,881
_RS08930
ABZR86_RS08935: ABZR86_RS08935 - hypothetical protein, at 1,992,941 to 1,994,218
_RS08935
Position (kb)
1991
1992
1993 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1990.781 kb on - strand, within ABZR86_RS08925 at 1990.791 kb on - strand, within ABZR86_RS08925 at 1990.791 kb on - strand, within ABZR86_RS08925 at 1991.016 kb on + strand, within ABZR86_RS08925 at 1991.016 kb on + strand, within ABZR86_RS08925 at 1991.017 kb on - strand, within ABZR86_RS08925 at 1991.017 kb on - strand, within ABZR86_RS08925 at 1991.017 kb on - strand, within ABZR86_RS08925 at 1991.018 kb on + strand, within ABZR86_RS08925 at 1991.255 kb on + strand, within ABZR86_RS08925 at 1991.277 kb on + strand, within ABZR86_RS08925 at 1991.278 kb on - strand, within ABZR86_RS08925 at 1991.279 kb on + strand, within ABZR86_RS08925 at 1991.279 kb on + strand, within ABZR86_RS08925 at 1991.280 kb on - strand, within ABZR86_RS08925 at 1991.280 kb on - strand, within ABZR86_RS08925 at 1991.343 kb on - strand, within ABZR86_RS08925 at 1991.343 kb on - strand, within ABZR86_RS08925 at 1991.343 kb on - strand, within ABZR86_RS08925 at 1991.343 kb on - strand, within ABZR86_RS08925 at 1991.534 kb on + strand at 1991.534 kb on + strand at 1991.534 kb on + strand at 1991.535 kb on - strand at 1991.535 kb on - strand at 1991.535 kb on - strand at 1991.535 kb on - strand at 1991.535 kb on - strand at 1991.535 kb on - strand at 1991.535 kb on - strand at 1991.535 kb on - strand at 1991.604 kb on + strand at 1991.605 kb on - strand at 1991.605 kb on - strand at 1991.605 kb on - strand at 1991.605 kb on - strand at 1992.888 kb on + strand at 1992.888 kb on + strand at 1992.889 kb on - strand at 1992.889 kb on - strand at 1992.893 kb on + strand at 1992.894 kb on - strand at 1992.894 kb on - strand at 1993.060 kb on + strand at 1993.060 kb on + strand at 1993.064 kb on + strand at 1993.064 kb on + strand at 1993.064 kb on + strand at 1993.064 kb on + strand at 1993.064 kb on + strand at 1993.064 kb on + strand at 1993.064 kb on + strand at 1993.064 kb on + strand at 1993.064 kb on + strand at 1993.065 kb on - strand at 1993.065 kb on - strand at 1993.065 kb on - strand at 1993.065 kb on - strand at 1993.065 kb on - strand at 1993.065 kb on - strand at 1993.199 kb on + strand, within ABZR86_RS08935 at 1993.199 kb on + strand, within ABZR86_RS08935 at 1993.200 kb on - strand, within ABZR86_RS08935 at 1993.200 kb on - strand, within ABZR86_RS08935 at 1993.364 kb on - strand, within ABZR86_RS08935 at 1993.412 kb on + strand, within ABZR86_RS08935 at 1993.412 kb on + strand, within ABZR86_RS08935 at 1993.412 kb on + strand, within ABZR86_RS08935 at 1993.412 kb on + strand, within ABZR86_RS08935 at 1993.413 kb on - strand, within ABZR86_RS08935 at 1993.413 kb on - strand, within ABZR86_RS08935 at 1993.413 kb on - strand, within ABZR86_RS08935 at 1993.413 kb on - strand, within ABZR86_RS08935 at 1993.413 kb on - strand, within ABZR86_RS08935 at 1993.413 kb on - strand, within ABZR86_RS08935 at 1993.414 kb on + strand, within ABZR86_RS08935 at 1993.414 kb on + strand, within ABZR86_RS08935 at 1993.415 kb on - strand, within ABZR86_RS08935 at 1993.500 kb on - strand, within ABZR86_RS08935 at 1993.500 kb on - strand, within ABZR86_RS08935 at 1993.569 kb on - strand, within ABZR86_RS08935 at 1993.569 kb on - strand, within ABZR86_RS08935 at 1993.626 kb on - strand, within ABZR86_RS08935 at 1993.679 kb on + strand, within ABZR86_RS08935 at 1993.847 kb on + strand, within ABZR86_RS08935 at 1993.876 kb on - strand, within ABZR86_RS08935
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 1,990,781 - ABZR86_RS08925 0.43 +0.3 1,990,791 - ABZR86_RS08925 0.44 -0.4 1,990,791 - ABZR86_RS08925 0.44 +0.4 1,991,016 + ABZR86_RS08925 0.61 -0.2 1,991,016 + ABZR86_RS08925 0.61 -0.1 1,991,017 - ABZR86_RS08925 0.61 +1.9 1,991,017 - ABZR86_RS08925 0.61 -0.4 1,991,017 - ABZR86_RS08925 0.61 -0.1 1,991,018 + ABZR86_RS08925 0.61 -0.5 1,991,255 + ABZR86_RS08925 0.78 -0.4 1,991,277 + ABZR86_RS08925 0.80 -0.2 1,991,278 - ABZR86_RS08925 0.80 +0.7 1,991,279 + ABZR86_RS08925 0.80 +0.2 1,991,279 + ABZR86_RS08925 0.80 -0.8 1,991,280 - ABZR86_RS08925 0.80 -0.3 1,991,280 - ABZR86_RS08925 0.80 +0.0 1,991,343 - ABZR86_RS08925 0.85 -0.3 1,991,343 - ABZR86_RS08925 0.85 -0.1 1,991,343 - ABZR86_RS08925 0.85 -0.6 1,991,343 - ABZR86_RS08925 0.85 +2.3 1,991,534 + -0.4 1,991,534 + +0.2 1,991,534 + +0.5 1,991,535 - +1.1 1,991,535 - +0.1 1,991,535 - -0.7 1,991,535 - +0.8 1,991,535 - -0.1 1,991,535 - +0.3 1,991,535 - -0.2 1,991,535 - +0.4 1,991,604 + +0.1 1,991,605 - -0.6 1,991,605 - +0.2 1,991,605 - +0.3 1,991,605 - +1.2 1,992,888 + +0.2 1,992,888 + -0.9 1,992,889 - +0.3 1,992,889 - -0.1 1,992,893 + +0.8 1,992,894 - -1.4 1,992,894 - +0.0 1,993,060 + +0.8 1,993,060 + +0.1 1,993,064 + +0.6 1,993,064 + -0.3 1,993,064 + -1.6 1,993,064 + -0.9 1,993,064 + +0.2 1,993,064 + +3.5 1,993,064 + +0.7 1,993,064 + +0.7 1,993,064 + -0.5 1,993,065 - -0.0 1,993,065 - -0.2 1,993,065 - +0.5 1,993,065 - -0.1 1,993,065 - -0.5 1,993,065 - -1.1 1,993,199 + ABZR86_RS08935 0.20 -0.0 1,993,199 + ABZR86_RS08935 0.20 +0.4 1,993,200 - ABZR86_RS08935 0.20 -0.3 1,993,200 - ABZR86_RS08935 0.20 +0.9 1,993,364 - ABZR86_RS08935 0.33 -0.0 1,993,412 + ABZR86_RS08935 0.37 +0.6 1,993,412 + ABZR86_RS08935 0.37 +0.8 1,993,412 + ABZR86_RS08935 0.37 -0.1 1,993,412 + ABZR86_RS08935 0.37 +0.2 1,993,413 - ABZR86_RS08935 0.37 +0.4 1,993,413 - ABZR86_RS08935 0.37 -0.5 1,993,413 - ABZR86_RS08935 0.37 +0.1 1,993,413 - ABZR86_RS08935 0.37 +0.7 1,993,413 - ABZR86_RS08935 0.37 +0.2 1,993,413 - ABZR86_RS08935 0.37 -0.1 1,993,414 + ABZR86_RS08935 0.37 -0.3 1,993,414 + ABZR86_RS08935 0.37 +0.2 1,993,415 - ABZR86_RS08935 0.37 +0.5 1,993,500 - ABZR86_RS08935 0.44 -0.8 1,993,500 - ABZR86_RS08935 0.44 +0.4 1,993,569 - ABZR86_RS08935 0.49 +0.7 1,993,569 - ABZR86_RS08935 0.49 -0.2 1,993,626 - ABZR86_RS08935 0.54 -0.2 1,993,679 + ABZR86_RS08935 0.58 -0.1 1,993,847 + ABZR86_RS08935 0.71 +0.1 1,993,876 - ABZR86_RS08935 0.73 +0.8
Or see this region's nucleotide sequence