Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS03585 and ABZR86_RS03590 are separated by 5 nucleotides ABZR86_RS03590 and ABZR86_RS03595 are separated by 89 nucleotides ABZR86_RS03595 and ABZR86_RS03600 are separated by 100 nucleotides ABZR86_RS03600 and ABZR86_RS03605 are separated by 152 nucleotides
ABZR86_RS03585: ABZR86_RS03585 - FdhF/YdeP family oxidoreductase, at 765,018 to 767,342
_RS03585
ABZR86_RS03590: ABZR86_RS03590 - formate dehydrogenase accessory sulfurtransferase FdhD, at 767,348 to 768,166
_RS03590
ABZR86_RS03595: ABZR86_RS03595 - FAD-containing oxidoreductase, at 768,256 to 769,626
_RS03595
ABZR86_RS03600: ABZR86_RS03600 - TMEM175 family protein, at 769,727 to 770,368
_RS03600
ABZR86_RS03605: ABZR86_RS03605 - autotransporter domain-containing protein, at 770,521 to 773,406
_RS03605
Position (kb) 768
769
770 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 767.283 kb on + strand at 767.284 kb on - strand at 767.453 kb on + strand, within ABZR86_RS03590 at 767.513 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.594 kb on + strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.595 kb on - strand, within ABZR86_RS03590 at 767.865 kb on + strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.866 kb on - strand, within ABZR86_RS03590 at 767.975 kb on + strand, within ABZR86_RS03590 at 767.975 kb on + strand, within ABZR86_RS03590 at 767.975 kb on + strand, within ABZR86_RS03590 at 768.116 kb on + strand at 768.117 kb on - strand at 768.117 kb on - strand at 768.117 kb on - strand at 768.427 kb on + strand, within ABZR86_RS03595 at 768.428 kb on - strand, within ABZR86_RS03595 at 768.428 kb on - strand, within ABZR86_RS03595 at 768.438 kb on + strand, within ABZR86_RS03595 at 768.439 kb on - strand, within ABZR86_RS03595 at 768.439 kb on - strand, within ABZR86_RS03595 at 768.461 kb on - strand, within ABZR86_RS03595 at 768.621 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.793 kb on + strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.794 kb on - strand, within ABZR86_RS03595 at 768.795 kb on + strand, within ABZR86_RS03595 at 768.795 kb on + strand, within ABZR86_RS03595 at 768.796 kb on - strand, within ABZR86_RS03595 at 769.053 kb on - strand, within ABZR86_RS03595 at 769.068 kb on + strand, within ABZR86_RS03595 at 769.161 kb on + strand, within ABZR86_RS03595 at 769.161 kb on + strand, within ABZR86_RS03595 at 769.200 kb on + strand, within ABZR86_RS03595 at 769.200 kb on + strand, within ABZR86_RS03595 at 769.200 kb on + strand, within ABZR86_RS03595 at 769.207 kb on - strand, within ABZR86_RS03595 at 769.213 kb on + strand, within ABZR86_RS03595 at 769.213 kb on + strand, within ABZR86_RS03595 at 769.289 kb on - strand, within ABZR86_RS03595 at 769.524 kb on + strand at 769.524 kb on + strand at 769.525 kb on - strand at 769.531 kb on + strand at 769.546 kb on + strand at 769.547 kb on - strand at 769.625 kb on - strand at 769.684 kb on + strand at 769.685 kb on - strand at 769.685 kb on - strand at 769.715 kb on + strand at 769.716 kb on - strand at 769.716 kb on - strand at 769.716 kb on - strand at 769.965 kb on + strand, within ABZR86_RS03600 at 769.965 kb on + strand, within ABZR86_RS03600 at 769.966 kb on - strand, within ABZR86_RS03600 at 769.966 kb on - strand, within ABZR86_RS03600 at 769.966 kb on - strand, within ABZR86_RS03600 at 769.990 kb on - strand, within ABZR86_RS03600 at 770.104 kb on + strand, within ABZR86_RS03600 at 770.182 kb on - strand, within ABZR86_RS03600 at 770.182 kb on - strand, within ABZR86_RS03600 at 770.450 kb on - strand at 770.455 kb on - strand at 770.455 kb on - strand at 770.517 kb on - strand at 770.522 kb on + strand at 770.523 kb on - strand at 770.588 kb on + strand at 770.589 kb on - strand at 770.589 kb on - strand at 770.589 kb on - strand at 770.589 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 767,283 + +0.6 767,284 - -0.0 767,453 + ABZR86_RS03590 0.13 -1.3 767,513 + ABZR86_RS03590 0.20 +0.3 767,594 + ABZR86_RS03590 0.30 -0.0 767,594 + ABZR86_RS03590 0.30 +0.2 767,594 + ABZR86_RS03590 0.30 +0.1 767,594 + ABZR86_RS03590 0.30 -0.2 767,594 + ABZR86_RS03590 0.30 +0.9 767,595 - ABZR86_RS03590 0.30 -0.9 767,595 - ABZR86_RS03590 0.30 -0.8 767,595 - ABZR86_RS03590 0.30 -0.5 767,595 - ABZR86_RS03590 0.30 -0.2 767,865 + ABZR86_RS03590 0.63 +0.5 767,866 - ABZR86_RS03590 0.63 +1.9 767,866 - ABZR86_RS03590 0.63 +0.6 767,866 - ABZR86_RS03590 0.63 +2.0 767,866 - ABZR86_RS03590 0.63 +3.5 767,975 + ABZR86_RS03590 0.77 -0.7 767,975 + ABZR86_RS03590 0.77 -0.1 767,975 + ABZR86_RS03590 0.77 -1.4 768,116 + -1.0 768,117 - +0.5 768,117 - +2.7 768,117 - +0.5 768,427 + ABZR86_RS03595 0.12 -0.5 768,428 - ABZR86_RS03595 0.13 +0.9 768,428 - ABZR86_RS03595 0.13 +1.2 768,438 + ABZR86_RS03595 0.13 -0.3 768,439 - ABZR86_RS03595 0.13 -0.3 768,439 - ABZR86_RS03595 0.13 +0.2 768,461 - ABZR86_RS03595 0.15 +0.5 768,621 + ABZR86_RS03595 0.27 +1.0 768,793 + ABZR86_RS03595 0.39 +0.3 768,793 + ABZR86_RS03595 0.39 -0.2 768,793 + ABZR86_RS03595 0.39 -0.6 768,793 + ABZR86_RS03595 0.39 +0.5 768,793 + ABZR86_RS03595 0.39 -1.1 768,794 - ABZR86_RS03595 0.39 -0.5 768,794 - ABZR86_RS03595 0.39 +2.7 768,794 - ABZR86_RS03595 0.39 -0.9 768,794 - ABZR86_RS03595 0.39 -0.3 768,794 - ABZR86_RS03595 0.39 -0.3 768,794 - ABZR86_RS03595 0.39 +0.2 768,794 - ABZR86_RS03595 0.39 +0.3 768,794 - ABZR86_RS03595 0.39 +0.1 768,795 + ABZR86_RS03595 0.39 +0.3 768,795 + ABZR86_RS03595 0.39 -0.1 768,796 - ABZR86_RS03595 0.39 +1.2 769,053 - ABZR86_RS03595 0.58 +0.1 769,068 + ABZR86_RS03595 0.59 -0.7 769,161 + ABZR86_RS03595 0.66 +0.0 769,161 + ABZR86_RS03595 0.66 +0.1 769,200 + ABZR86_RS03595 0.69 -0.1 769,200 + ABZR86_RS03595 0.69 -1.0 769,200 + ABZR86_RS03595 0.69 -0.1 769,207 - ABZR86_RS03595 0.69 +0.3 769,213 + ABZR86_RS03595 0.70 -0.3 769,213 + ABZR86_RS03595 0.70 +0.4 769,289 - ABZR86_RS03595 0.75 +0.7 769,524 + -0.8 769,524 + +0.5 769,525 - +0.2 769,531 + +0.1 769,546 + +0.7 769,547 - +0.6 769,625 - -0.5 769,684 + -0.1 769,685 - +0.2 769,685 - -0.1 769,715 + +0.3 769,716 - -0.3 769,716 - -0.5 769,716 - +0.4 769,965 + ABZR86_RS03600 0.37 +1.1 769,965 + ABZR86_RS03600 0.37 -0.7 769,966 - ABZR86_RS03600 0.37 -1.6 769,966 - ABZR86_RS03600 0.37 +0.2 769,966 - ABZR86_RS03600 0.37 -0.7 769,990 - ABZR86_RS03600 0.41 +0.4 770,104 + ABZR86_RS03600 0.59 +1.3 770,182 - ABZR86_RS03600 0.71 +1.0 770,182 - ABZR86_RS03600 0.71 +0.5 770,450 - +0.3 770,455 - -2.4 770,455 - +0.7 770,517 - +1.1 770,522 + -1.2 770,523 - +0.0 770,588 + -1.0 770,589 - +1.0 770,589 - -2.1 770,589 - +0.4 770,589 - -0.4
Or see this region's nucleotide sequence