Experiment: D-Cellobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00540 and ABZR86_RS00545 are separated by 55 nucleotides ABZR86_RS00545 and ABZR86_RS00550 are separated by 13 nucleotides ABZR86_RS00550 and ABZR86_RS00555 are separated by 81 nucleotides
ABZR86_RS00540: ABZR86_RS00540 - alpha/beta fold hydrolase, at 102,799 to 103,680
_RS00540
ABZR86_RS00545: ABZR86_RS00545 - NADH:flavin oxidoreductase/NADH oxidase, at 103,736 to 104,788
_RS00545
ABZR86_RS00550: ABZR86_RS00550 - pirin family protein, at 104,802 to 105,677
_RS00550
ABZR86_RS00555: ABZR86_RS00555 - DUF962 domain-containing protein, at 105,759 to 106,061
_RS00555
Position (kb) 103
104
105 Strain fitness (log2 ratio) -2
-1
0
1 at 102.766 kb on - strand at 102.766 kb on - strand at 102.820 kb on - strand at 102.820 kb on - strand at 102.820 kb on - strand at 102.913 kb on + strand, within ABZR86_RS00540 at 102.914 kb on - strand, within ABZR86_RS00540 at 102.949 kb on + strand, within ABZR86_RS00540 at 102.949 kb on + strand, within ABZR86_RS00540 at 103.177 kb on + strand, within ABZR86_RS00540 at 103.177 kb on + strand, within ABZR86_RS00540 at 103.237 kb on + strand, within ABZR86_RS00540 at 103.279 kb on + strand, within ABZR86_RS00540 at 103.279 kb on + strand, within ABZR86_RS00540 at 103.279 kb on + strand, within ABZR86_RS00540 at 103.279 kb on + strand, within ABZR86_RS00540 at 103.280 kb on - strand, within ABZR86_RS00540 at 103.812 kb on - strand at 103.851 kb on + strand, within ABZR86_RS00545 at 103.851 kb on + strand, within ABZR86_RS00545 at 103.852 kb on - strand, within ABZR86_RS00545 at 104.002 kb on + strand, within ABZR86_RS00545 at 104.003 kb on - strand, within ABZR86_RS00545 at 104.149 kb on + strand, within ABZR86_RS00545 at 104.714 kb on + strand at 104.787 kb on - strand at 104.787 kb on - strand at 104.797 kb on - strand at 104.958 kb on - strand, within ABZR86_RS00550 at 105.288 kb on + strand, within ABZR86_RS00550 at 105.383 kb on + strand, within ABZR86_RS00550 at 105.383 kb on + strand, within ABZR86_RS00550 at 105.383 kb on + strand, within ABZR86_RS00550 at 105.384 kb on - strand, within ABZR86_RS00550 at 105.384 kb on - strand, within ABZR86_RS00550 at 105.384 kb on - strand, within ABZR86_RS00550 at 105.624 kb on + strand at 105.716 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Cellobiose (C) remove 102,766 - -0.5 102,766 - +0.9 102,820 - +0.4 102,820 - -0.7 102,820 - +0.0 102,913 + ABZR86_RS00540 0.13 -0.5 102,914 - ABZR86_RS00540 0.13 +1.1 102,949 + ABZR86_RS00540 0.17 +0.0 102,949 + ABZR86_RS00540 0.17 -0.9 103,177 + ABZR86_RS00540 0.43 -0.6 103,177 + ABZR86_RS00540 0.43 -0.5 103,237 + ABZR86_RS00540 0.50 +0.4 103,279 + ABZR86_RS00540 0.54 +0.8 103,279 + ABZR86_RS00540 0.54 +1.0 103,279 + ABZR86_RS00540 0.54 -0.1 103,279 + ABZR86_RS00540 0.54 +0.4 103,280 - ABZR86_RS00540 0.55 +1.5 103,812 - -0.4 103,851 + ABZR86_RS00545 0.11 -0.4 103,851 + ABZR86_RS00545 0.11 -0.2 103,852 - ABZR86_RS00545 0.11 -1.4 104,002 + ABZR86_RS00545 0.25 +0.3 104,003 - ABZR86_RS00545 0.25 +0.2 104,149 + ABZR86_RS00545 0.39 -1.3 104,714 + -1.2 104,787 - -0.8 104,787 - -0.4 104,797 - -0.5 104,958 - ABZR86_RS00550 0.18 -0.7 105,288 + ABZR86_RS00550 0.55 +0.1 105,383 + ABZR86_RS00550 0.66 +0.4 105,383 + ABZR86_RS00550 0.66 -0.3 105,383 + ABZR86_RS00550 0.66 +0.9 105,384 - ABZR86_RS00550 0.66 -0.8 105,384 - ABZR86_RS00550 0.66 +0.8 105,384 - ABZR86_RS00550 0.66 -1.8 105,624 + -0.8 105,716 - -0.9
Or see this region's nucleotide sequence