Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03744

Experiment: L-Isoleucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (N)
3,912,618	-		CCNA_03743	0.25	+0.8
3,912,661	+		CCNA_03743	0.28	-1.2
3,912,674	-		CCNA_03743	0.29	+1.3
3,912,674	-		CCNA_03743	0.29	-2.2
3,912,691	-		CCNA_03743	0.30	+0.7
3,912,725	+		CCNA_03743	0.32	+0.7
3,912,730	+		CCNA_03743	0.33	+2.9
3,912,738	-		CCNA_03743	0.33	+0.0
3,912,743	+		CCNA_03743	0.33	+0.6
3,912,760	+		CCNA_03743	0.35	-1.0
3,912,763	+		CCNA_03743	0.35	-1.0
3,912,768	-		CCNA_03743	0.35	-0.0
3,912,770	+		CCNA_03743	0.35	+0.0
3,912,802	-		CCNA_03743	0.38	-0.5
3,912,805	+		CCNA_03743	0.38	+0.4
3,912,805	+		CCNA_03743	0.38	-0.1
3,912,829	-		CCNA_03743	0.39	+0.1
3,912,849	+		CCNA_03743	0.41	+0.6
3,912,852	+		CCNA_03743	0.41	-0.4
3,912,882	+		CCNA_03743	0.43	-1.7
3,912,904	+		CCNA_03743	0.45	-0.1
3,912,925	-		CCNA_03743	0.46	-1.0
3,912,926	+		CCNA_03743	0.46	-0.4
3,912,928	-		CCNA_03743	0.46	+1.2
3,912,941	+		CCNA_03743	0.47	-1.5
3,912,941	+		CCNA_03743	0.47	+0.7
3,912,984	+		CCNA_03743	0.50	-0.7
3,912,984	+		CCNA_03743	0.50	-2.5
3,912,989	+		CCNA_03743	0.50	-0.3
3,913,011	+		CCNA_03743	0.52	-1.4
3,913,047	+		CCNA_03743	0.55	-1.4
3,913,055	-		CCNA_03743	0.55	-0.9
3,913,135	+		CCNA_03743	0.61	-0.6
3,913,204	-		CCNA_03743	0.65	-1.5
3,913,204	-		CCNA_03743	0.65	-0.2
3,913,204	-		CCNA_03743	0.65	+0.2
3,913,208	+		CCNA_03743	0.66	-1.3
3,913,209	+		CCNA_03743	0.66	-1.9
3,913,216	-		CCNA_03743	0.66	+1.4
3,913,249	-		CCNA_03743	0.69	-1.1
3,913,266	-		CCNA_03743	0.70	+0.2
3,913,287	-		CCNA_03743	0.71	+0.5
3,913,333	+		CCNA_03743	0.74	+0.5
3,913,346	+		CCNA_03743	0.75	-0.7
3,913,354	-		CCNA_03743	0.76	-0.6
3,913,411	+		CCNA_03743	0.80	-2.3
3,913,414	-		CCNA_03743	0.80	-0.2
3,913,419	-		CCNA_03743	0.80	+0.7
3,913,420	-		CCNA_03743	0.80	+0.7
3,913,427	+		CCNA_03743	0.81	-0.9
3,913,490	+				+1.5
3,913,507	+		CCNA_03743	0.86	+1.4
3,913,567	-				-0.7
3,913,568	+				-1.0
3,913,568	+				-0.9
3,913,568	+				+1.2
3,913,576	-				-1.1
3,913,576	-				-0.1
3,913,576	-				-3.2
3,913,576	-				-0.0
3,913,577	-				+0.3
3,913,622	-				+0.8
3,913,644	-				+0.1
3,913,675	+				+0.3
3,913,683	-				-1.8
3,913,683	-				-1.1
3,913,708	+				-1.8
3,913,708	+				+0.7
3,913,708	+				+1.9
3,913,708	+				-0.2
3,913,708	+				-0.8
3,913,708	+				-0.4
3,913,716	-				+0.5
3,913,716	-				-0.4
3,913,716	-				-1.0
3,913,716	-				+2.2
3,913,716	-				-0.4
3,913,716	-				-0.4
3,913,716	-				+1.0
3,913,721	-				-1.8
3,913,721	-				-1.2
3,913,734	+		CCNA_03744	0.11	-0.8
3,913,742	-		CCNA_03744	0.12	-2.9
3,913,744	+		CCNA_03744	0.12	-1.1
3,913,744	+		CCNA_03744	0.12	+0.1
3,913,744	+		CCNA_03744	0.12	-1.0
3,913,752	-		CCNA_03744	0.13	-1.6
3,913,759	+		CCNA_03744	0.13	-1.0
3,913,884	+		CCNA_03744	0.25	-0.9
3,913,885	+		CCNA_03744	0.25	+0.2
3,913,903	-		CCNA_03744	0.27	+0.4
3,913,903	-		CCNA_03744	0.27	+0.2
3,913,903	-		CCNA_03744	0.27	+0.1
3,913,903	-		CCNA_03744	0.27	-0.7
3,913,903	-		CCNA_03744	0.27	+0.7
3,913,908	-		CCNA_03744	0.27	-0.8
3,913,965	+		CCNA_03744	0.32	+1.2
3,913,988	-		CCNA_03744	0.35	-2.6
3,914,049	-		CCNA_03744	0.40	-0.8
3,914,049	-		CCNA_03744	0.40	-0.2
3,914,070	-		CCNA_03744	0.42	-0.8
3,914,082	-		CCNA_03744	0.43	-0.1
3,914,094	+		CCNA_03744	0.45	-1.4
3,914,094	+		CCNA_03744	0.45	+0.7
3,914,094	+		CCNA_03744	0.45	+1.2
3,914,121	+		CCNA_03744	0.47	-0.9
3,914,129	-		CCNA_03744	0.48	-0.6
3,914,129	-		CCNA_03744	0.48	-1.3
3,914,141	+		CCNA_03744	0.49	-2.0
3,914,141	+		CCNA_03744	0.49	-1.2
3,914,141	+		CCNA_03744	0.49	+1.2
3,914,141	+		CCNA_03744	0.49	-0.9
3,914,141	+		CCNA_03744	0.49	-1.2
3,914,141	+		CCNA_03744	0.49	-1.0
3,914,141	+		CCNA_03744	0.49	-2.4
3,914,141	+		CCNA_03744	0.49	-1.7
3,914,149	-		CCNA_03744	0.50	-2.2
3,914,149	-		CCNA_03744	0.50	-2.5
3,914,149	-		CCNA_03744	0.50	-0.7
3,914,149	-		CCNA_03744	0.50	-1.0
3,914,149	-		CCNA_03744	0.50	-0.2
3,914,149	-		CCNA_03744	0.50	-0.4
3,914,149	-		CCNA_03744	0.50	-2.4
3,914,149	-		CCNA_03744	0.50	-1.8
3,914,149	-		CCNA_03744	0.50	+2.1
3,914,149	-		CCNA_03744	0.50	-0.1
3,914,149	-		CCNA_03744	0.50	-0.6
3,914,193	-		CCNA_03744	0.54	-1.7
3,914,228	-		CCNA_03744	0.57	-1.0
3,914,235	+		CCNA_03744	0.58	-1.3
3,914,235	+		CCNA_03744	0.58	-1.1
3,914,238	-		CCNA_03744	0.58	-1.3
3,914,243	-		CCNA_03744	0.58	-1.1
3,914,267	-		CCNA_03744	0.61	-0.4
3,914,333	+		CCNA_03744	0.67	-0.4
3,914,336	-		CCNA_03744	0.67	-2.7
3,914,341	-		CCNA_03744	0.68	-1.8
3,914,342	-		CCNA_03744	0.68	-0.1
3,914,344	+		CCNA_03744	0.68	+0.2
3,914,351	+		CCNA_03744	0.69	-0.6
3,914,352	-		CCNA_03744	0.69	-1.2
3,914,371	+		CCNA_03744	0.70	-0.1
3,914,424	-		CCNA_03744	0.75	-2.2
3,914,446	+		CCNA_03744	0.77	-2.0
3,914,460	-		CCNA_03744	0.79	+0.7
3,914,470	-		CCNA_03744	0.80	-0.5
3,914,470	-		CCNA_03744	0.80	-2.0
3,914,473	+		CCNA_03744	0.80	-0.3
3,914,505	-		CCNA_03744	0.83	-0.6
3,914,549	-		CCNA_03744	0.87	-1.6
3,914,553	-		CCNA_03744	0.87	-0.1
3,914,566	-		CCNA_03744	0.89	-0.9
3,914,571	-		CCNA_03744	0.89	-0.2
3,914,571	-		CCNA_03744	0.89	+0.7
3,914,573	+		CCNA_03744	0.89	-0.1
3,914,591	-				-0.7
3,914,623	-				+0.3
3,914,630	-				+1.2
3,914,637	+				-1.5
3,914,637	+				+0.8
3,914,637	+				+1.5
3,914,645	-				-0.1
3,914,645	-				-1.2
3,914,688	+				-2.3
3,914,691	-				+0.6
3,914,699	+				+1.5
3,914,706	-				-0.4
3,914,706	-				-1.5
3,914,706	-				-0.2
3,914,773	+				-0.5
3,914,783	-				-1.5
3,914,788	-				-0.1
3,914,799	+				+0.7
3,914,822	+				+0.0
3,914,828	+				+2.9
3,914,833	+				+1.5
3,914,836	-				-0.5
3,914,841	-				+1.7
3,914,875	+		CCNA_03745	0.14	+0.2
3,914,877	+		CCNA_03745	0.14	-1.1
3,914,885	-		CCNA_03745	0.15	-0.0
3,914,903	-		CCNA_03745	0.17	-0.7
3,914,984	-		CCNA_03745	0.26	+0.1
3,914,984	-		CCNA_03745	0.26	-0.8
3,914,984	-		CCNA_03745	0.26	-1.4
3,914,984	-		CCNA_03745	0.26	-1.0
3,914,984	-		CCNA_03745	0.26	-0.9
3,914,984	-				+2.5
3,915,017	-		CCNA_03745	0.30	-0.4
3,915,019	+		CCNA_03745	0.31	-1.2
3,915,027	-		CCNA_03745	0.32	-1.3
3,915,043	-		CCNA_03745	0.33	-0.4
3,915,062	+		CCNA_03745	0.36	-0.6
3,915,093	+		CCNA_03745	0.39	-0.3
3,915,149	+		CCNA_03745	0.46	-0.8
3,915,211	-		CCNA_03745	0.53	-0.6
3,915,231	-		CCNA_03745	0.56	-0.6
3,915,233	+		CCNA_03745	0.56	+1.1
3,915,238	+		CCNA_03745	0.57	-0.3
3,915,238	+		CCNA_03745	0.57	-1.6
3,915,238	+		CCNA_03745	0.57	+0.7
3,915,246	-		CCNA_03745	0.58	+1.8
3,915,246	-		CCNA_03745	0.58	-0.7
3,915,246	-		CCNA_03745	0.58	-0.7
3,915,246	-		CCNA_03745	0.58	-0.2
3,915,246	-		CCNA_03745	0.58	-0.1
3,915,246	-		CCNA_03745	0.58	+0.5
3,915,253	+		CCNA_03745	0.58	+0.1
3,915,277	-		CCNA_03745	0.61	-0.1
3,915,325	-		CCNA_03745	0.67	-0.1
3,915,354	-		CCNA_03745	0.70	-0.3
3,915,354	-		CCNA_03745	0.70	-0.6
3,915,363	+		CCNA_03745	0.71	+0.3
3,915,401	-		CCNA_03745	0.76	+1.4
3,915,422	-		CCNA_03745	0.78	-0.4
3,915,440	-		CCNA_03745	0.81	+0.8
3,915,485	+		CCNA_03745	0.86	+0.6
3,915,533	+				-1.9
3,915,548	+				+2.9
3,915,556	-				+0.8
3,915,556	-				+0.3
3,915,576	+				+0.3
3,915,576	+				-1.6
3,915,581	+				-1.0
3,915,581	+				-0.2
3,915,581	+				+1.5
3,915,584	-				-0.3
3,915,584	-				-0.8
3,915,584	-				-0.3
3,915,584	-				-0.9
3,915,584	-				-0.4
3,915,586	+				+2.0
3,915,589	-				-1.1
3,915,589	-				+0.1
3,915,589	-				+0.5
3,915,592	+				-1.6