Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03423

Experiment: L-Isoleucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (N)
3,588,758	+		CCNA_03422	0.48	+0.8
3,588,761	-		CCNA_03422	0.48	-1.2
3,588,761	-		CCNA_03422	0.48	-1.5
3,588,785	+		CCNA_03422	0.49	+0.0
3,588,785	+		CCNA_03422	0.49	-1.0
3,588,793	-		CCNA_03422	0.50	-2.2
3,588,803	+		CCNA_03422	0.50	-1.8
3,588,806	+		CCNA_03422	0.51	-0.8
3,588,806	+		CCNA_03422	0.51	-0.8
3,588,812	+		CCNA_03422	0.51	+0.2
3,588,814	-		CCNA_03422	0.51	+0.4
3,588,854	-		CCNA_03422	0.53	-0.6
3,588,856	+		CCNA_03422	0.53	+1.2
3,588,856	+		CCNA_03422	0.53	-1.4
3,588,857	+		CCNA_03422	0.53	-0.3
3,588,863	+		CCNA_03422	0.54	-0.4
3,588,865	-		CCNA_03422	0.54	-1.1
3,588,871	-		CCNA_03422	0.54	-0.1
3,588,876	-		CCNA_03422	0.55	+0.2
3,588,881	-		CCNA_03422	0.55	-0.4
3,588,881	-		CCNA_03422	0.55	+1.2
3,588,905	+		CCNA_03422	0.56	+0.5
3,588,990	+		CCNA_03422	0.61	-0.5
3,588,993	-		CCNA_03422	0.61	-1.1
3,588,993	-		CCNA_03422	0.61	+2.4
3,588,998	-		CCNA_03422	0.61	-0.4
3,588,998	-		CCNA_03422	0.61	-1.0
3,589,076	+		CCNA_03422	0.66	+0.5
3,589,084	+		CCNA_03422	0.66	+0.9
3,589,084	+		CCNA_03422	0.66	-0.7
3,589,084	+		CCNA_03422	0.66	-0.6
3,589,084	+		CCNA_03422	0.66	+0.7
3,589,092	-		CCNA_03422	0.67	-1.3
3,589,092	-		CCNA_03422	0.67	+0.3
3,589,107	+		CCNA_03422	0.67	-0.9
3,589,151	-		CCNA_03422	0.70	+0.4
3,589,159	-		CCNA_03422	0.70	-0.5
3,589,193	+		CCNA_03422	0.72	-1.0
3,589,201	-		CCNA_03422	0.73	-2.0
3,589,274	+		CCNA_03422	0.77	+0.7
3,589,274	+		CCNA_03422	0.77	-1.0
3,589,274	+		CCNA_03422	0.77	-1.8
3,589,282	-		CCNA_03422	0.77	+0.2
3,589,282	-		CCNA_03422	0.77	-0.8
3,589,314	+		CCNA_03422	0.79	+1.8
3,589,320	-		CCNA_03422	0.79	+2.0
3,589,323	+		CCNA_03422	0.80	-1.7
3,589,323	+		CCNA_03422	0.80	-1.1
3,589,331	-		CCNA_03422	0.80	+1.0
3,589,337	+		CCNA_03422	0.80	+0.8
3,589,370	-		CCNA_03422	0.82	+0.1
3,589,402	-		CCNA_03422	0.84	+1.6
3,589,405	+		CCNA_03422	0.84	-1.3
3,589,405	+		CCNA_03422	0.84	+2.3
3,589,447	+		CCNA_03422	0.86	-1.0
3,589,457	+		CCNA_03422	0.87	-1.7
3,589,464	+		CCNA_03422	0.87	+1.0
3,589,464	+		CCNA_03422	0.87	-1.2
3,589,520	+				-2.2
3,589,539	-				+0.3
3,589,594	+				-0.1
3,589,594	+				+1.7
3,589,647	+				+0.0
3,589,648	+				-0.6
3,589,655	-				-0.0
3,589,678	-				-1.1
3,589,678	-				+1.2
3,589,698	+				-0.5
3,589,729	+				+0.5
3,589,737	-				-0.2
3,589,737	-				-1.3
3,589,764	+				+0.3
3,589,784	-		CCNA_03423	0.14	+1.2
3,589,794	-		CCNA_03423	0.16	-0.6
3,589,800	+		CCNA_03423	0.18	+0.3
3,589,808	-		CCNA_03423	0.20	-1.9
3,589,821	-		CCNA_03423	0.23	-1.1
3,589,870	+		CCNA_03423	0.36	-1.3
3,589,891	+		CCNA_03423	0.41	+0.2
3,589,891	+		CCNA_03423	0.41	+0.2
3,589,893	+		CCNA_03423	0.42	+1.2
3,589,899	-		CCNA_03423	0.43	-2.0
3,589,899	-		CCNA_03423	0.43	-1.3
3,589,914	-		CCNA_03423	0.47	-1.8
3,589,914	-		CCNA_03423	0.47	-1.2
3,589,924	-		CCNA_03423	0.49	-1.5
3,589,963	+		CCNA_03423	0.59	+0.1
3,589,963	+		CCNA_03423	0.59	-1.7
3,589,971	-		CCNA_03423	0.62	-1.1
3,589,971	-		CCNA_03423	0.62	-1.5
3,589,971	-		CCNA_03423	0.62	-1.5
3,589,975	+		CCNA_03423	0.63	-0.9
3,589,983	-		CCNA_03423	0.65	+0.2
3,589,983	-		CCNA_03423	0.65	-0.2
3,589,983	-		CCNA_03423	0.65	-1.2
3,589,983	-		CCNA_03423	0.65	-1.8
3,589,997	-		CCNA_03423	0.68	-1.3
3,589,997	-		CCNA_03423	0.68	+0.8
3,589,997	-		CCNA_03423	0.68	-0.3
3,589,997	-		CCNA_03423	0.68	+0.2
3,589,997	-		CCNA_03423	0.68	+0.3
3,590,003	-		CCNA_03423	0.70	+0.0
3,590,047	-		CCNA_03423	0.81	+0.2
3,590,049	+		CCNA_03423	0.82	-0.2
3,590,049	+		CCNA_03423	0.82	-0.8
3,590,049	+		CCNA_03423	0.82	+0.3
3,590,057	-		CCNA_03423	0.84	-2.1
3,590,057	-		CCNA_03423	0.84	+1.0
3,590,057	-		CCNA_03423	0.84	-0.1
3,590,057	-		CCNA_03423	0.84	+0.9
3,590,057	-		CCNA_03423	0.84	+0.3
3,590,057	-		CCNA_03423	0.84	+0.2
3,590,057	-		CCNA_03423	0.84	-0.7
3,590,057	-		CCNA_03423	0.84	-2.0
3,590,057	-		CCNA_03423	0.84	-3.4
3,590,140	+				-1.4
3,590,140	+				-1.3
3,590,140	+				-0.5
3,590,140	+				-1.6
3,590,148	-				-1.4
3,590,148	-				-2.4
3,590,148	-				-1.4
3,590,148	-				-2.7
3,590,148	-				-2.7
3,590,148	-				+0.3
3,590,148	-				-2.2
3,590,148	-				-1.5
3,590,188	+				-0.1
3,590,190	+				-0.9
3,590,196	-				-0.6
3,590,198	-				+0.0
3,590,220	-				+0.6
3,590,220	-				-2.7
3,590,225	-				-2.6
3,590,324	-				-0.7
3,590,471	+		CCNA_03424	0.15	-0.7
3,590,471	+		CCNA_03424	0.15	-0.7
3,590,479	-		CCNA_03424	0.15	+1.2
3,590,523	+		CCNA_03424	0.18	+0.2
3,590,523	+		CCNA_03424	0.18	+2.5
3,590,523	+		CCNA_03424	0.18	-0.7
3,590,528	+		CCNA_03424	0.19	+0.9
3,590,538	+		CCNA_03424	0.19	+2.0
3,590,568	+		CCNA_03424	0.21	-0.6
3,590,622	+		CCNA_03424	0.25	-1.2
3,590,622	+		CCNA_03424	0.25	-0.4
3,590,654	-		CCNA_03424	0.27	+1.2
3,590,680	+		CCNA_03424	0.29	-0.3
3,590,680	+		CCNA_03424	0.29	-0.2
3,590,709	-		CCNA_03424	0.31	+0.5
3,590,718	+		CCNA_03424	0.32	-0.8
3,590,755	+		CCNA_03424	0.34	-0.9
3,590,814	-		CCNA_03424	0.38	-0.8
3,590,848	+		CCNA_03424	0.40	+1.2
3,590,943	-		CCNA_03424	0.47	-1.2
3,590,945	+		CCNA_03424	0.47	-0.4
3,590,945	+		CCNA_03424	0.47	+0.2
3,590,969	+		CCNA_03424	0.49	+0.5
3,591,012	+		CCNA_03424	0.52	+0.7
3,591,020	-		CCNA_03424	0.52	+0.4
3,591,029	+		CCNA_03424	0.53	+0.7
3,591,031	+		CCNA_03424	0.53	-0.7
3,591,031	+		CCNA_03424	0.53	+0.8
3,591,059	+		CCNA_03424	0.55	-0.3
3,591,085	-		CCNA_03424	0.57	+1.2
3,591,107	+		CCNA_03424	0.58	-0.5