Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01135

Experiment: L-Isoleucine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Isoleucine (N)
1,238,020	-		CCNA_01133	0.29	-1.3
1,238,037	+		CCNA_01133	0.32	-0.4
1,238,047	+		CCNA_01133	0.34	-0.2
1,238,055	+		CCNA_01133	0.35	+1.7
1,238,118	+		CCNA_01133	0.47	-1.5
1,238,121	-		CCNA_01133	0.48	-1.6
1,238,126	-		CCNA_01133	0.49	-0.3
1,238,127	+		CCNA_01133	0.49	+1.0
1,238,135	-		CCNA_01133	0.50	+0.2
1,238,137	+		CCNA_01133	0.51	+0.9
1,238,137	+		CCNA_01133	0.51	-1.0
1,238,140	-		CCNA_01133	0.51	-2.6
1,238,140	-		CCNA_01133	0.51	-2.2
1,238,145	-		CCNA_01133	0.52	-1.5
1,238,185	+		CCNA_01133	0.60	-1.3
1,238,218	-		CCNA_01133	0.66	+0.0
1,238,218	-		CCNA_01133	0.66	-0.2
1,238,223	-		CCNA_01133	0.67	+0.3
1,238,285	+		CCNA_01133	0.79	-1.9
1,238,293	-		CCNA_01133	0.80	+0.7
1,238,302	+		CCNA_01133	0.82	+0.2
1,238,355	-				-2.6
1,238,361	-				-0.3
1,238,378	+				-1.0
1,238,386	-				-2.2
1,238,386	-				+1.0
1,238,395	+				-1.1
1,238,396	-				+3.1
1,238,400	+				-0.9
1,238,451	-				-1.3
1,238,470	+				-1.2
1,238,517	+				-0.5
1,238,538	+				+0.7
1,238,555	+				+0.1
1,238,576	+		CCNA_01134	0.14	-0.7
1,238,587	+		CCNA_01134	0.16	-1.1
1,238,587	+		CCNA_01134	0.16	+0.0
1,238,587	+		CCNA_01134	0.16	+0.5
1,238,595	-		CCNA_01134	0.18	-0.1
1,238,600	-		CCNA_01134	0.19	-0.0
1,238,607	+		CCNA_01134	0.21	-2.3
1,238,617	+		CCNA_01134	0.23	+0.4
1,238,638	-		CCNA_01134	0.29	+0.5
1,238,687	-		CCNA_01134	0.40	-0.3
1,238,716	-		CCNA_01134	0.47	-1.4
1,238,754	-		CCNA_01134	0.57	-0.7
1,238,809	+				+1.5
1,238,819	+		CCNA_01134	0.72	+2.7
1,238,834	+		CCNA_01134	0.76	-0.8
1,238,838	+		CCNA_01134	0.77	+0.0
1,238,859	+		CCNA_01134	0.82	+0.4
1,238,877	-		CCNA_01134	0.86	-1.7
1,238,887	-		CCNA_01134	0.89	-1.1
1,238,901	+				+1.2
1,238,913	+				-0.8
1,238,913	+				+0.7
1,238,935	+				+3.5
1,238,936	+				+0.1
1,238,953	-				+0.3
1,238,970	+				-0.4
1,238,970	+				-0.7
1,238,970	+				+0.4
1,239,000	+				+0.3
1,239,058	+		CCNA_01135	0.27	-2.0
1,239,058	+		CCNA_01135	0.27	-0.6
1,239,058	+		CCNA_01135	0.27	-1.5
1,239,060	+		CCNA_01135	0.28	+0.6
1,239,060	+		CCNA_01135	0.28	-1.0
1,239,068	-		CCNA_01135	0.30	-3.3
1,239,068	-		CCNA_01135	0.30	+0.5
1,239,167	-		CCNA_01135	0.61	-0.1
1,239,167	-		CCNA_01135	0.61	+0.3
1,239,182	-		CCNA_01135	0.66	+1.0
1,239,256	-		CCNA_01135	0.89	-1.1
1,239,269	+				-0.6
1,239,277	-				+0.7
1,239,316	+				+2.3
1,239,322	+				+1.0
1,239,322	+				-0.1
1,239,371	-				-1.0
1,239,384	+				-1.1
1,239,384	+				-0.7
1,239,384	+				+0.9
1,239,392	-				-1.9
1,239,392	-				-0.6
1,239,392	-				-1.9
1,239,392	-				-1.9
1,239,392	-				-0.5
1,239,392	-				-0.9
1,239,414	+				+1.1
1,239,433	-				+0.0
1,239,436	+				+0.7
1,239,441	+				-1.4
1,239,462	+				-1.7
1,239,470	+				-1.9
1,239,499	+		CCNA_01136	0.11	-0.7
1,239,514	-		CCNA_01136	0.13	-0.2
1,239,519	-		CCNA_01136	0.13	+1.2
1,239,584	+		CCNA_01136	0.21	-0.1
1,239,584	+		CCNA_01136	0.21	+2.1
1,239,591	+		CCNA_01136	0.21	-0.1
1,239,592	-		CCNA_01136	0.22	-0.3
1,239,592	-		CCNA_01136	0.22	-1.5
1,239,592	-		CCNA_01136	0.22	+1.0
1,239,600	-		CCNA_01136	0.22	-0.6
1,239,600	-		CCNA_01136	0.22	-0.4
1,239,601	+		CCNA_01136	0.23	+0.9
1,239,637	-		CCNA_01136	0.27	-2.1
1,239,639	-		CCNA_01136	0.27	-1.9
1,239,703	-		CCNA_01136	0.34	-1.5
1,239,713	-		CCNA_01136	0.35	+0.7
1,239,745	-		CCNA_01136	0.39	-0.9
1,239,782	-		CCNA_01136	0.43	-1.2
1,239,819	+		CCNA_01136	0.47	-0.2
1,239,830	+		CCNA_01136	0.48	-0.8
1,239,837	-		CCNA_01136	0.49	+1.5
1,239,839	+		CCNA_01136	0.49	-0.3
1,239,855	+		CCNA_01136	0.51	-0.7
1,239,859	+		CCNA_01136	0.52	+1.5
1,239,860	+		CCNA_01136	0.52	-1.0
1,239,860	+		CCNA_01136	0.52	-1.1
1,239,860	+		CCNA_01136	0.52	-0.1
1,239,868	-		CCNA_01136	0.53	-1.6
1,239,874	+		CCNA_01136	0.53	-1.3
1,239,910	+		CCNA_01136	0.57	+1.1
1,239,920	+		CCNA_01136	0.58	-0.3
1,239,920	+		CCNA_01136	0.58	+0.8
1,239,939	+		CCNA_01136	0.60	-0.3
1,239,947	-		CCNA_01136	0.61	+0.3
1,239,966	+		CCNA_01136	0.64	-1.7
1,239,966	+		CCNA_01136	0.64	-0.5
1,239,976	+		CCNA_01136	0.65	-0.2
1,239,976	+		CCNA_01136	0.65	-0.1
1,239,976	+		CCNA_01136	0.65	-2.6
1,239,976	+		CCNA_01136	0.65	-0.4
1,239,984	-		CCNA_01136	0.66	+0.9
1,239,984	-		CCNA_01136	0.66	+0.9
1,239,984	-		CCNA_01136	0.66	+0.0
1,239,984	-		CCNA_01136	0.66	-1.2
1,239,984	-		CCNA_01136	0.66	-1.4
1,239,984	-		CCNA_01136	0.66	+0.3
1,239,984	-		CCNA_01136	0.66	+1.5
1,239,984	-		CCNA_01136	0.66	-0.6
1,239,989	-		CCNA_01136	0.66	-1.5
1,240,000	-		CCNA_01136	0.67	-1.0
1,240,028	+		CCNA_01136	0.70	-0.5
1,240,036	-		CCNA_01136	0.71	-0.3
1,240,066	-		CCNA_01136	0.75	+0.3
1,240,068	-		CCNA_01136	0.75	-0.4
1,240,109	-		CCNA_01136	0.80	-1.2
1,240,129	+		CCNA_01136	0.82	-0.7
1,240,132	-		CCNA_01136	0.82	-1.2
1,240,145	+		CCNA_01136	0.84	+1.5
1,240,195	+		CCNA_01136	0.89	-0.4
1,240,195	+		CCNA_01136	0.89	-1.3
1,240,195	+		CCNA_01136	0.89	-2.3
1,240,195	+		CCNA_01136	0.89	+0.3
1,240,210	+				+1.9
1,240,234	-				+0.7
1,240,254	+				-0.4
1,240,254	+				-0.7