Experiment: L-Isoleucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_00524 and CCNA_00525 overlap by 14 nucleotides CCNA_00525 and CCNA_00526 are separated by 114 nucleotides CCNA_00526 and CCNA_00527 are separated by 130 nucleotides
CCNA_00524: CCNA_00524 - conserved hypothetical cytosolic protein, at 537,635 to 538,759
_00524
CCNA_00525: CCNA_00525 - prolipoprotein diacylglyceryl transferase, at 538,746 to 539,654
_00525
CCNA_00526: CCNA_00526 - BMFP membrane fusogenic protein, at 539,769 to 540,026
_00526
CCNA_00527: CCNA_00527 - hypothetical protein, at 540,157 to 540,663
_00527
Position (kb) 538
539
540 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 538.761 kb on - strand at 538.761 kb on - strand at 538.763 kb on + strand at 538.787 kb on + strand at 539.352 kb on - strand, within CCNA_00525 at 539.505 kb on - strand, within CCNA_00525 at 539.656 kb on + strand at 539.676 kb on - strand at 539.678 kb on + strand at 539.678 kb on + strand at 539.678 kb on + strand at 539.678 kb on + strand at 539.678 kb on + strand at 539.678 kb on + strand at 539.678 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.688 kb on + strand at 539.690 kb on + strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.696 kb on - strand at 539.697 kb on + strand at 539.709 kb on + strand at 539.714 kb on + strand at 539.766 kb on + strand at 539.904 kb on - strand, within CCNA_00526 at 540.045 kb on - strand at 540.066 kb on - strand at 540.082 kb on + strand at 540.090 kb on - strand at 540.091 kb on + strand at 540.091 kb on + strand at 540.091 kb on + strand at 540.116 kb on + strand at 540.116 kb on + strand at 540.116 kb on + strand at 540.116 kb on + strand at 540.124 kb on - strand at 540.124 kb on - strand at 540.124 kb on - strand at 540.143 kb on + strand at 540.179 kb on + strand at 540.186 kb on + strand at 540.203 kb on + strand at 540.203 kb on + strand at 540.203 kb on + strand at 540.245 kb on + strand, within CCNA_00527 at 540.253 kb on - strand, within CCNA_00527 at 540.253 kb on - strand, within CCNA_00527 at 540.263 kb on - strand, within CCNA_00527 at 540.268 kb on + strand, within CCNA_00527 at 540.335 kb on - strand, within CCNA_00527 at 540.343 kb on + strand, within CCNA_00527 at 540.346 kb on + strand, within CCNA_00527 at 540.349 kb on - strand, within CCNA_00527 at 540.349 kb on - strand, within CCNA_00527 at 540.363 kb on + strand, within CCNA_00527 at 540.398 kb on + strand, within CCNA_00527 at 540.406 kb on + strand, within CCNA_00527 at 540.406 kb on - strand, within CCNA_00527 at 540.450 kb on + strand, within CCNA_00527 at 540.467 kb on + strand, within CCNA_00527 at 540.486 kb on + strand, within CCNA_00527 at 540.487 kb on + strand, within CCNA_00527 at 540.488 kb on + strand, within CCNA_00527 at 540.488 kb on + strand, within CCNA_00527 at 540.498 kb on + strand, within CCNA_00527 at 540.498 kb on + strand, within CCNA_00527 at 540.498 kb on + strand, within CCNA_00527 at 540.498 kb on + strand, within CCNA_00527 at 540.498 kb on + strand, within CCNA_00527 at 540.511 kb on + strand, within CCNA_00527 at 540.519 kb on - strand, within CCNA_00527 at 540.522 kb on + strand, within CCNA_00527 at 540.530 kb on - strand, within CCNA_00527 at 540.588 kb on - strand, within CCNA_00527 at 540.609 kb on - strand, within CCNA_00527
Per-strain Table
Position Strand Gene LocusTag Fraction L-Isoleucine (N) remove 538,761 - -0.3 538,761 - +0.4 538,763 + -0.9 538,787 + +1.0 539,352 - CCNA_00525 0.67 -1.9 539,505 - CCNA_00525 0.83 -0.7 539,656 + -1.7 539,676 - -1.9 539,678 + -1.0 539,678 + +0.3 539,678 + -1.5 539,678 + -0.0 539,678 + -0.3 539,678 + -0.5 539,678 + -0.1 539,688 + +0.4 539,688 + -1.1 539,688 + -0.4 539,688 + +0.2 539,688 + -0.9 539,688 + -0.0 539,688 + +0.1 539,688 + +1.4 539,688 + +1.0 539,688 + +0.1 539,688 + -0.0 539,688 + +0.9 539,688 + -1.9 539,688 + -1.2 539,688 + -0.8 539,688 + -0.8 539,688 + -2.4 539,688 + -0.8 539,688 + +0.8 539,688 + -0.6 539,690 + +0.0 539,696 - -0.5 539,696 - +0.3 539,696 - -0.0 539,696 - +0.5 539,696 - +0.5 539,696 - -0.7 539,696 - -2.4 539,696 - -2.8 539,696 - -1.4 539,696 - -0.4 539,696 - -0.5 539,696 - +0.2 539,696 - +1.4 539,696 - +1.1 539,696 - +0.1 539,696 - +0.1 539,696 - -1.2 539,696 - -0.6 539,696 - -1.1 539,696 - -0.9 539,696 - -0.8 539,696 - -0.1 539,696 - -0.1 539,696 - -1.7 539,696 - +1.1 539,696 - -0.9 539,696 - -0.4 539,696 - +0.1 539,696 - -1.9 539,696 - +1.0 539,696 - +0.5 539,696 - +0.2 539,696 - -2.1 539,696 - -0.2 539,696 - -1.1 539,696 - +1.2 539,696 - +0.7 539,696 - +0.8 539,696 - +0.1 539,697 + +0.2 539,709 + +0.2 539,714 + -1.9 539,766 + -0.5 539,904 - CCNA_00526 0.52 +0.5 540,045 - -1.5 540,066 - -1.0 540,082 + +1.7 540,090 - +1.4 540,091 + +0.9 540,091 + +0.2 540,091 + +1.9 540,116 + -0.9 540,116 + -0.3 540,116 + +1.1 540,116 + +0.8 540,124 - +2.7 540,124 - -0.4 540,124 - -0.7 540,143 + +0.3 540,179 + +0.7 540,186 + +0.6 540,203 + -0.3 540,203 + +1.9 540,203 + +0.4 540,245 + CCNA_00527 0.17 +0.0 540,253 - CCNA_00527 0.19 +3.0 540,253 - CCNA_00527 0.19 -2.7 540,263 - CCNA_00527 0.21 -0.9 540,268 + CCNA_00527 0.22 +0.2 540,335 - CCNA_00527 0.35 -0.4 540,343 + CCNA_00527 0.37 +0.7 540,346 + CCNA_00527 0.37 +0.5 540,349 - CCNA_00527 0.38 -0.0 540,349 - CCNA_00527 0.38 -0.2 540,363 + CCNA_00527 0.41 +1.0 540,398 + CCNA_00527 0.48 +0.0 540,406 + CCNA_00527 0.49 +2.1 540,406 - CCNA_00527 0.49 -0.6 540,450 + CCNA_00527 0.58 +1.8 540,467 + CCNA_00527 0.61 -1.6 540,486 + CCNA_00527 0.65 +0.8 540,487 + CCNA_00527 0.65 +0.1 540,488 + CCNA_00527 0.65 +0.3 540,488 + CCNA_00527 0.65 +0.2 540,498 + CCNA_00527 0.67 +1.1 540,498 + CCNA_00527 0.67 +0.1 540,498 + CCNA_00527 0.67 +0.1 540,498 + CCNA_00527 0.67 +1.1 540,498 + CCNA_00527 0.67 +0.2 540,511 + CCNA_00527 0.70 +0.3 540,519 - CCNA_00527 0.71 -1.3 540,522 + CCNA_00527 0.72 +0.2 540,530 - CCNA_00527 0.74 +0.1 540,588 - CCNA_00527 0.85 +0.3 540,609 - CCNA_00527 0.89 +1.7
Or see this region's nucleotide sequence