Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS06120

Experiment: R2A with Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with Dimethyl Sulfoxide 5 vol%
1,509,203	-				-0.1
1,509,223	-				-0.0
1,509,249	+				+0.1
1,509,377	+		CA265_RS06115	0.13	+0.4
1,509,408	-		CA265_RS06115	0.18	+0.0
1,509,489	-		CA265_RS06115	0.29	+0.6
1,509,536	+		CA265_RS06115	0.36	+0.3
1,509,537	-		CA265_RS06115	0.36	+0.2
1,509,555	+		CA265_RS06115	0.39	+0.2
1,509,556	+		CA265_RS06115	0.39	+0.8
1,509,556	+		CA265_RS06115	0.39	-0.1
1,509,557	-		CA265_RS06115	0.39	+0.4
1,509,674	+		CA265_RS06115	0.56	+0.0
1,509,674	+				+1.3
1,509,675	-		CA265_RS06115	0.56	+0.8
1,509,675	-		CA265_RS06115	0.56	-0.4
1,509,679	-				-0.7
1,509,679	-		CA265_RS06115	0.56	+1.0
1,509,747	+		CA265_RS06115	0.66	+0.4
1,509,747	+		CA265_RS06115	0.66	-0.8
1,509,747	+		CA265_RS06115	0.66	-0.7
1,509,748	-		CA265_RS06115	0.66	+1.2
1,509,880	-		CA265_RS06115	0.85	+0.3
1,509,930	+				+0.4
1,509,930	+				-0.2
1,509,931	-				+0.1
1,509,973	+				-0.1
1,510,009	-				+0.4
1,510,012	-				-0.1
1,510,191	-				-0.2
1,510,194	+				-1.1
1,510,217	+				-2.2
1,510,218	-				-2.0
1,510,218	-				-0.6
1,510,218	-				-2.0
1,510,291	+		CA265_RS06120	0.14	+0.9
1,510,306	+		CA265_RS06120	0.15	-0.4
1,510,310	+		CA265_RS06120	0.15	+0.9
1,510,311	-		CA265_RS06120	0.16	+0.1
1,510,324	-		CA265_RS06120	0.17	-0.0
1,510,354	+		CA265_RS06120	0.20	-0.1
1,510,437	-		CA265_RS06120	0.27	+1.3
1,510,467	+		CA265_RS06120	0.30	+0.2
1,510,500	+		CA265_RS06120	0.33	+0.2
1,510,500	+		CA265_RS06120	0.33	-0.8
1,510,542	-		CA265_RS06120	0.37	-0.2
1,510,594	+		CA265_RS06120	0.42	+0.0
1,510,625	+		CA265_RS06120	0.45	+0.5
1,510,635	+		CA265_RS06120	0.46	+0.1
1,510,635	+		CA265_RS06120	0.46	-0.4
1,510,723	+		CA265_RS06120	0.55	+1.4
1,510,723	+		CA265_RS06120	0.55	-0.3
1,510,724	-		CA265_RS06120	0.55	+0.2
1,510,724	-		CA265_RS06120	0.55	+0.8
1,510,724	-		CA265_RS06120	0.55	-0.5
1,510,734	+		CA265_RS06120	0.56	-0.4
1,510,734	+		CA265_RS06120	0.56	+1.3
1,510,746	-		CA265_RS06120	0.57	-0.5
1,510,746	-		CA265_RS06120	0.57	+0.0
1,510,762	-		CA265_RS06120	0.58	-0.6
1,510,766	+		CA265_RS06120	0.59	-0.0
1,510,846	+		CA265_RS06120	0.66	+0.2
1,510,867	-		CA265_RS06120	0.68	+0.5
1,510,887	+		CA265_RS06120	0.70	+0.2
1,510,888	-		CA265_RS06120	0.70	-0.6
1,510,937	+		CA265_RS06120	0.75	-0.0
1,510,952	-		CA265_RS06120	0.76	-0.0
1,511,010	-		CA265_RS06120	0.82	+0.1
1,511,013	+		CA265_RS06120	0.82	-0.2
1,511,020	+		CA265_RS06120	0.83	+0.4
1,511,160	-				-0.2
1,511,183	-				-0.7
1,511,219	+				+0.1
1,511,219	+				+0.4
1,511,304	+				+0.9
1,511,329	-				+0.7
1,511,371	+		CA265_RS06125	0.13	+0.3
1,511,405	+		CA265_RS06125	0.16	-0.4
1,511,405	+		CA265_RS06125	0.16	+0.6
1,511,475	+		CA265_RS06125	0.22	-0.4
1,511,476	-		CA265_RS06125	0.22	+0.6
1,511,552	-		CA265_RS06125	0.29	+0.0
1,511,553	+		CA265_RS06125	0.29	-0.1
1,511,672	+		CA265_RS06125	0.39	-0.1
1,511,673	-		CA265_RS06125	0.39	+0.0
1,511,767	-		CA265_RS06125	0.47	-0.3
1,511,793	+		CA265_RS06125	0.50	-1.4
1,511,794	-		CA265_RS06125	0.50	-0.2
1,511,798	-		CA265_RS06125	0.50	-0.3
1,511,842	-		CA265_RS06125	0.54	+0.1
1,511,842	-		CA265_RS06125	0.54	+0.6
1,511,909	+		CA265_RS06125	0.60	+0.2
1,511,919	-		CA265_RS06125	0.61	-0.8
1,511,939	+		CA265_RS06125	0.62	-1.0
1,511,940	-		CA265_RS06125	0.62	+0.5
1,511,943	+		CA265_RS06125	0.63	-0.9
1,511,958	-		CA265_RS06125	0.64	+0.0
1,511,964	-		CA265_RS06125	0.64	+0.5
1,511,972	+		CA265_RS06125	0.65	-1.1
1,511,973	-		CA265_RS06125	0.65	+0.2
1,511,980	+		CA265_RS06125	0.66	+0.2
1,512,029	+		CA265_RS06125	0.70	+0.2
1,512,093	-		CA265_RS06125	0.76	-0.1
1,512,194	-		CA265_RS06125	0.84	+0.0
1,512,194	-		CA265_RS06125	0.84	-0.3