Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_25540 and AO353_25545 overlap by 1 nucleotides AO353_25545 and AO353_25550 overlap by 4 nucleotides AO353_25550 and AO353_25555 overlap by 4 nucleotides AO353_25555 and AO353_25560 overlap by 4 nucleotides AO353_25560 and AO353_25565 overlap by 4 nucleotides
AO353_25540: AO353_25540 - UDP-4-amino-4-deoxy-L-arabinose formyltransferase, at 5,633,610 to 5,635,601
_25540
AO353_25545: AO353_25545 - 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase, at 5,635,601 to 5,636,485
_25545
AO353_25550: AO353_25550 - 4-amino-4-deoxy-L-arabinose transferase, at 5,636,482 to 5,638,131
_25550
AO353_25555: AO353_25555 - 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase, at 5,638,128 to 5,638,472
_25555
AO353_25560: AO353_25560 - 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase, at 5,638,469 to 5,638,882
_25560
AO353_25565: AO353_25565 - UDP-glucose 6-dehydrogenase, at 5,638,879 to 5,640,252
_25565
Position (kb) 5636
5637
5638
5639 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5636.653 kb on + strand, within AO353_25550 at 5636.776 kb on + strand, within AO353_25550 at 5637.061 kb on + strand, within AO353_25550 at 5637.061 kb on + strand, within AO353_25550 at 5637.178 kb on + strand, within AO353_25550 at 5637.259 kb on + strand, within AO353_25550 at 5637.259 kb on + strand, within AO353_25550 at 5637.424 kb on + strand, within AO353_25550 at 5637.424 kb on + strand, within AO353_25550 at 5637.424 kb on + strand, within AO353_25550 at 5637.424 kb on + strand, within AO353_25550 at 5637.424 kb on + strand, within AO353_25550 at 5637.424 kb on + strand, within AO353_25550 at 5637.424 kb on + strand, within AO353_25550 at 5637.424 kb on + strand, within AO353_25550 at 5637.592 kb on + strand, within AO353_25550 at 5637.592 kb on + strand, within AO353_25550 at 5637.592 kb on + strand at 5637.592 kb on + strand, within AO353_25550 at 5637.592 kb on + strand, within AO353_25550 at 5637.592 kb on + strand, within AO353_25550 at 5637.760 kb on + strand, within AO353_25550 at 5637.892 kb on + strand, within AO353_25550 at 5637.892 kb on + strand, within AO353_25550 at 5637.892 kb on + strand, within AO353_25550 at 5637.892 kb on + strand, within AO353_25550 at 5637.892 kb on + strand, within AO353_25550 at 5638.081 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 5,636,653 + AO353_25550 0.10 -1.2 5,636,776 + AO353_25550 0.18 -1.1 5,637,061 + AO353_25550 0.35 -0.7 5,637,061 + AO353_25550 0.35 -1.0 5,637,178 + AO353_25550 0.42 -1.3 5,637,259 + AO353_25550 0.47 -0.7 5,637,259 + AO353_25550 0.47 -2.3 5,637,424 + AO353_25550 0.57 +0.1 5,637,424 + AO353_25550 0.57 -3.1 5,637,424 + AO353_25550 0.57 +0.3 5,637,424 + AO353_25550 0.57 -1.4 5,637,424 + AO353_25550 0.57 -1.4 5,637,424 + AO353_25550 0.57 -1.6 5,637,424 + AO353_25550 0.57 +0.5 5,637,424 + AO353_25550 0.57 -0.9 5,637,592 + AO353_25550 0.67 -2.3 5,637,592 + AO353_25550 0.67 -1.9 5,637,592 + -0.7 5,637,592 + AO353_25550 0.67 -1.2 5,637,592 + AO353_25550 0.67 +0.3 5,637,592 + AO353_25550 0.67 +0.3 5,637,760 + AO353_25550 0.77 -1.5 5,637,892 + AO353_25550 0.85 -0.4 5,637,892 + AO353_25550 0.85 -1.2 5,637,892 + AO353_25550 0.85 -0.2 5,637,892 + AO353_25550 0.85 -0.8 5,637,892 + AO353_25550 0.85 -2.8 5,638,081 + -0.7
Or see this region's nucleotide sequence