Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_19365 and AO353_19370 are separated by 153 nucleotides AO353_19370 and AO353_19375 overlap by 1 nucleotides AO353_19375 and AO353_19380 are separated by 268 nucleotides AO353_19380 and AO353_19385 are separated by 102 nucleotides
AO353_19365: AO353_19365 - thiol:disulfide interchange protein, at 4,243,532 to 4,245,268
_19365
AO353_19370: AO353_19370 - transcriptional regulator, at 4,245,422 to 4,246,102
_19370
AO353_19375: AO353_19375 - histidine kinase, at 4,246,102 to 4,247,424
_19375
AO353_19380: AO353_19380 - GCN5 family acetyltransferase, at 4,247,693 to 4,248,178
_19380
AO353_19385: AO353_19385 - methyltransferase, at 4,248,281 to 4,249,108
_19385
Position (kb) 4246
4247
4248 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 4245.252 kb on - strand at 4245.252 kb on - strand at 4245.293 kb on + strand at 4245.293 kb on + strand at 4245.293 kb on + strand at 4245.294 kb on - strand at 4245.294 kb on - strand at 4245.294 kb on - strand at 4245.294 kb on - strand at 4245.294 kb on - strand at 4245.367 kb on + strand at 4245.367 kb on + strand at 4245.368 kb on - strand at 4245.394 kb on + strand at 4245.394 kb on + strand at 4245.394 kb on + strand at 4245.395 kb on - strand at 4245.395 kb on - strand at 4245.395 kb on - strand at 4245.410 kb on - strand at 4245.410 kb on - strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.429 kb on + strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.430 kb on - strand at 4245.713 kb on + strand, within AO353_19370 at 4245.714 kb on - strand, within AO353_19370 at 4245.714 kb on - strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.821 kb on + strand, within AO353_19370 at 4245.822 kb on - strand, within AO353_19370 at 4245.822 kb on - strand, within AO353_19370 at 4245.822 kb on - strand, within AO353_19370 at 4245.822 kb on - strand, within AO353_19370 at 4245.822 kb on - strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.996 kb on + strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4245.997 kb on - strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.000 kb on + strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.001 kb on - strand, within AO353_19370 at 4246.018 kb on + strand, within AO353_19370 at 4246.018 kb on + strand, within AO353_19370 at 4246.019 kb on - strand, within AO353_19370 at 4246.243 kb on - strand, within AO353_19375 at 4246.243 kb on - strand, within AO353_19375 at 4246.324 kb on - strand, within AO353_19375 at 4246.324 kb on - strand, within AO353_19375 at 4246.632 kb on + strand, within AO353_19375 at 4246.633 kb on - strand, within AO353_19375 at 4246.808 kb on + strand, within AO353_19375 at 4246.809 kb on - strand, within AO353_19375 at 4246.809 kb on - strand, within AO353_19375 at 4247.077 kb on + strand, within AO353_19375 at 4247.078 kb on - strand, within AO353_19375 at 4247.078 kb on - strand, within AO353_19375 at 4247.078 kb on - strand, within AO353_19375 at 4247.078 kb on - strand, within AO353_19375 at 4247.442 kb on + strand at 4247.442 kb on + strand at 4247.442 kb on + strand at 4247.442 kb on + strand at 4247.442 kb on + strand at 4247.442 kb on + strand at 4247.443 kb on - strand at 4247.443 kb on - strand at 4247.443 kb on - strand at 4247.443 kb on - strand at 4247.443 kb on - strand at 4247.443 kb on - strand at 4247.443 kb on - strand at 4247.443 kb on - strand at 4247.443 kb on - strand at 4247.443 kb on - strand at 4247.443 kb on - strand at 4247.452 kb on - strand at 4247.452 kb on - strand at 4247.458 kb on - strand at 4247.545 kb on - strand at 4247.545 kb on - strand at 4247.545 kb on - strand at 4247.584 kb on + strand at 4247.584 kb on + strand at 4247.610 kb on + strand at 4247.610 kb on + strand at 4247.611 kb on - strand at 4247.611 kb on - strand at 4247.611 kb on - strand at 4247.624 kb on + strand at 4247.624 kb on + strand at 4247.624 kb on + strand at 4247.625 kb on - strand at 4247.625 kb on - strand at 4247.687 kb on - strand at 4247.706 kb on + strand at 4247.706 kb on + strand at 4247.707 kb on - strand at 4247.743 kb on + strand, within AO353_19380 at 4247.744 kb on - strand, within AO353_19380 at 4247.744 kb on - strand, within AO353_19380 at 4247.850 kb on + strand, within AO353_19380 at 4247.850 kb on + strand, within AO353_19380 at 4247.850 kb on + strand, within AO353_19380 at 4247.850 kb on + strand, within AO353_19380 at 4247.850 kb on + strand, within AO353_19380 at 4247.850 kb on + strand, within AO353_19380 at 4247.850 kb on + strand, within AO353_19380 at 4247.850 kb on + strand, within AO353_19380 at 4247.850 kb on + strand, within AO353_19380 at 4247.850 kb on + strand, within AO353_19380 at 4247.850 kb on + strand, within AO353_19380 at 4247.851 kb on - strand at 4247.851 kb on - strand, within AO353_19380 at 4247.851 kb on - strand, within AO353_19380 at 4247.851 kb on - strand, within AO353_19380 at 4247.851 kb on - strand, within AO353_19380 at 4247.851 kb on - strand, within AO353_19380 at 4247.851 kb on - strand, within AO353_19380 at 4247.851 kb on - strand, within AO353_19380 at 4247.851 kb on - strand, within AO353_19380 at 4247.851 kb on - strand, within AO353_19380 at 4247.851 kb on - strand, within AO353_19380 at 4247.851 kb on - strand, within AO353_19380 at 4247.851 kb on - strand, within AO353_19380 at 4247.879 kb on + strand, within AO353_19380 at 4247.879 kb on + strand, within AO353_19380 at 4247.880 kb on - strand, within AO353_19380 at 4247.880 kb on - strand, within AO353_19380 at 4247.958 kb on - strand, within AO353_19380 at 4248.137 kb on - strand at 4248.177 kb on - strand at 4248.196 kb on + strand at 4248.196 kb on + strand at 4248.196 kb on + strand at 4248.197 kb on - strand at 4248.197 kb on - strand at 4248.197 kb on - strand at 4248.197 kb on - strand at 4248.197 kb on - strand at 4248.232 kb on + strand at 4248.233 kb on - strand at 4248.233 kb on - strand at 4248.240 kb on + strand at 4248.240 kb on + strand at 4248.241 kb on - strand at 4248.241 kb on - strand at 4248.241 kb on - strand at 4248.241 kb on - strand at 4248.244 kb on + strand at 4248.244 kb on + strand at 4248.244 kb on + strand at 4248.244 kb on + strand at 4248.244 kb on + strand at 4248.245 kb on - strand at 4248.245 kb on - strand at 4248.312 kb on + strand at 4248.312 kb on + strand at 4248.313 kb on - strand at 4248.313 kb on - strand at 4248.403 kb on + strand, within AO353_19385 at 4248.403 kb on + strand, within AO353_19385 at 4248.403 kb on + strand, within AO353_19385 at 4248.404 kb on - strand, within AO353_19385 at 4248.404 kb on - strand, within AO353_19385 at 4248.404 kb on - strand, within AO353_19385 at 4248.404 kb on - strand, within AO353_19385
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 4,245,252 - -0.2 4,245,252 - -0.7 4,245,293 + -1.4 4,245,293 + +2.3 4,245,293 + +0.4 4,245,294 - -1.2 4,245,294 - -3.2 4,245,294 - -0.3 4,245,294 - -0.2 4,245,294 - -1.6 4,245,367 + +1.3 4,245,367 + +1.0 4,245,368 - -2.6 4,245,394 + +0.5 4,245,394 + +0.9 4,245,394 + +0.8 4,245,395 - -1.7 4,245,395 - -2.5 4,245,395 - -1.0 4,245,410 - -3.6 4,245,410 - -0.1 4,245,429 + -2.4 4,245,429 + -2.0 4,245,429 + -1.7 4,245,429 + -2.7 4,245,429 + -0.9 4,245,429 + -3.3 4,245,429 + -3.2 4,245,429 + -1.7 4,245,429 + -1.8 4,245,429 + -3.8 4,245,429 + -0.7 4,245,429 + -2.7 4,245,429 + -1.3 4,245,429 + -0.2 4,245,429 + -3.1 4,245,429 + -3.1 4,245,430 - -0.1 4,245,430 - -1.6 4,245,430 - -1.4 4,245,430 - -1.1 4,245,430 - -1.7 4,245,430 - -0.3 4,245,430 - -3.1 4,245,430 - -1.1 4,245,430 - -3.0 4,245,430 - -2.0 4,245,430 - -2.8 4,245,430 - -2.6 4,245,430 - -1.8 4,245,430 - -2.6 4,245,430 - -0.9 4,245,430 - -2.5 4,245,713 + AO353_19370 0.43 -3.3 4,245,714 - AO353_19370 0.43 -3.8 4,245,714 - AO353_19370 0.43 -1.2 4,245,821 + AO353_19370 0.59 -3.0 4,245,821 + AO353_19370 0.59 -1.6 4,245,821 + AO353_19370 0.59 -0.7 4,245,821 + AO353_19370 0.59 -3.6 4,245,821 + AO353_19370 0.59 -1.7 4,245,821 + AO353_19370 0.59 -1.2 4,245,822 - AO353_19370 0.59 -0.9 4,245,822 - AO353_19370 0.59 -3.2 4,245,822 - AO353_19370 0.59 -2.3 4,245,822 - AO353_19370 0.59 -1.8 4,245,822 - AO353_19370 0.59 -3.2 4,245,996 + AO353_19370 0.84 -0.4 4,245,996 + AO353_19370 0.84 -2.7 4,245,996 + AO353_19370 0.84 -1.3 4,245,996 + AO353_19370 0.84 -2.2 4,245,996 + AO353_19370 0.84 -1.7 4,245,996 + AO353_19370 0.84 -3.3 4,245,996 + AO353_19370 0.84 -1.2 4,245,996 + AO353_19370 0.84 -1.1 4,245,996 + AO353_19370 0.84 -1.7 4,245,996 + AO353_19370 0.84 -0.6 4,245,996 + AO353_19370 0.84 -2.3 4,245,996 + AO353_19370 0.84 -2.7 4,245,996 + AO353_19370 0.84 -2.3 4,245,996 + AO353_19370 0.84 -3.8 4,245,996 + AO353_19370 0.84 -1.9 4,245,996 + AO353_19370 0.84 -1.7 4,245,996 + AO353_19370 0.84 -1.7 4,245,996 + AO353_19370 0.84 -3.4 4,245,996 + AO353_19370 0.84 -3.3 4,245,996 + AO353_19370 0.84 -2.2 4,245,996 + AO353_19370 0.84 -1.7 4,245,996 + AO353_19370 0.84 -1.1 4,245,996 + AO353_19370 0.84 -1.2 4,245,997 - AO353_19370 0.84 -1.9 4,245,997 - AO353_19370 0.84 -2.1 4,245,997 - AO353_19370 0.84 -3.0 4,245,997 - AO353_19370 0.84 -1.8 4,245,997 - AO353_19370 0.84 -0.1 4,245,997 - AO353_19370 0.84 -2.1 4,245,997 - AO353_19370 0.84 -2.7 4,245,997 - AO353_19370 0.84 -0.2 4,245,997 - AO353_19370 0.84 -1.7 4,245,997 - AO353_19370 0.84 -1.2 4,245,997 - AO353_19370 0.84 -1.1 4,245,997 - AO353_19370 0.84 -1.8 4,245,997 - AO353_19370 0.84 -1.2 4,245,997 - AO353_19370 0.84 -2.8 4,245,997 - AO353_19370 0.84 -1.4 4,245,997 - AO353_19370 0.84 -1.2 4,245,997 - AO353_19370 0.84 -1.1 4,245,997 - AO353_19370 0.84 -1.2 4,245,997 - AO353_19370 0.84 -0.9 4,245,997 - AO353_19370 0.84 -3.2 4,245,997 - AO353_19370 0.84 -1.9 4,245,997 - AO353_19370 0.84 -2.8 4,245,997 - AO353_19370 0.84 -2.6 4,245,997 - AO353_19370 0.84 -2.1 4,246,000 + AO353_19370 0.85 -1.1 4,246,000 + AO353_19370 0.85 -1.0 4,246,000 + AO353_19370 0.85 -3.1 4,246,000 + AO353_19370 0.85 -1.6 4,246,000 + AO353_19370 0.85 -1.6 4,246,000 + AO353_19370 0.85 -2.3 4,246,000 + AO353_19370 0.85 -0.9 4,246,000 + AO353_19370 0.85 -1.1 4,246,000 + AO353_19370 0.85 -1.2 4,246,000 + AO353_19370 0.85 -2.7 4,246,000 + AO353_19370 0.85 -0.8 4,246,000 + AO353_19370 0.85 -2.3 4,246,001 - AO353_19370 0.85 -1.6 4,246,001 - AO353_19370 0.85 -1.2 4,246,001 - AO353_19370 0.85 -3.0 4,246,001 - AO353_19370 0.85 -3.0 4,246,001 - AO353_19370 0.85 -3.1 4,246,001 - AO353_19370 0.85 -0.7 4,246,001 - AO353_19370 0.85 -1.4 4,246,001 - AO353_19370 0.85 -1.4 4,246,018 + AO353_19370 0.88 -2.1 4,246,018 + AO353_19370 0.88 -2.6 4,246,019 - AO353_19370 0.88 -1.1 4,246,243 - AO353_19375 0.11 -3.0 4,246,243 - AO353_19375 0.11 -2.6 4,246,324 - AO353_19375 0.17 -1.7 4,246,324 - AO353_19375 0.17 -2.1 4,246,632 + AO353_19375 0.40 -2.6 4,246,633 - AO353_19375 0.40 -0.7 4,246,808 + AO353_19375 0.53 -2.5 4,246,809 - AO353_19375 0.53 -1.6 4,246,809 - AO353_19375 0.53 -3.1 4,247,077 + AO353_19375 0.74 -0.3 4,247,078 - AO353_19375 0.74 -1.1 4,247,078 - AO353_19375 0.74 -0.3 4,247,078 - AO353_19375 0.74 -0.6 4,247,078 - AO353_19375 0.74 -0.1 4,247,442 + -1.9 4,247,442 + -2.6 4,247,442 + +0.3 4,247,442 + +0.5 4,247,442 + -0.6 4,247,442 + +0.1 4,247,443 - -1.4 4,247,443 - -1.2 4,247,443 - +0.0 4,247,443 - -0.3 4,247,443 - -0.7 4,247,443 - -0.8 4,247,443 - -1.4 4,247,443 - -1.3 4,247,443 - -2.0 4,247,443 - -1.3 4,247,443 - -2.2 4,247,452 - +0.4 4,247,452 - +0.1 4,247,458 - -0.3 4,247,545 - +1.7 4,247,545 - -0.8 4,247,545 - +0.3 4,247,584 + +1.0 4,247,584 + -2.7 4,247,610 + -0.5 4,247,610 + +0.4 4,247,611 - -0.7 4,247,611 - -1.9 4,247,611 - -2.4 4,247,624 + +1.3 4,247,624 + +0.4 4,247,624 + -1.5 4,247,625 - +0.3 4,247,625 - -0.1 4,247,687 - +0.1 4,247,706 + -0.6 4,247,706 + -0.6 4,247,707 - +0.8 4,247,743 + AO353_19380 0.10 +1.1 4,247,744 - AO353_19380 0.10 +0.6 4,247,744 - AO353_19380 0.10 +0.3 4,247,850 + AO353_19380 0.32 -2.1 4,247,850 + AO353_19380 0.32 +1.7 4,247,850 + AO353_19380 0.32 -0.6 4,247,850 + AO353_19380 0.32 +0.2 4,247,850 + AO353_19380 0.32 +0.6 4,247,850 + AO353_19380 0.32 +0.2 4,247,850 + AO353_19380 0.32 +0.7 4,247,850 + AO353_19380 0.32 +0.3 4,247,850 + AO353_19380 0.32 +0.3 4,247,850 + AO353_19380 0.32 +0.9 4,247,850 + AO353_19380 0.32 -1.1 4,247,851 - -0.6 4,247,851 - AO353_19380 0.33 -0.6 4,247,851 - AO353_19380 0.33 +1.8 4,247,851 - AO353_19380 0.33 -0.7 4,247,851 - AO353_19380 0.33 -0.1 4,247,851 - AO353_19380 0.33 -0.6 4,247,851 - AO353_19380 0.33 +0.2 4,247,851 - AO353_19380 0.33 -0.6 4,247,851 - AO353_19380 0.33 -0.7 4,247,851 - AO353_19380 0.33 +1.7 4,247,851 - AO353_19380 0.33 +0.8 4,247,851 - AO353_19380 0.33 +0.7 4,247,851 - AO353_19380 0.33 +0.3 4,247,879 + AO353_19380 0.38 -1.7 4,247,879 + AO353_19380 0.38 +0.3 4,247,880 - AO353_19380 0.38 -0.7 4,247,880 - AO353_19380 0.38 +0.1 4,247,958 - AO353_19380 0.55 -0.3 4,248,137 - -0.7 4,248,177 - -0.0 4,248,196 + +1.0 4,248,196 + -0.3 4,248,196 + -0.2 4,248,197 - -1.2 4,248,197 - -2.6 4,248,197 - +1.5 4,248,197 - -0.1 4,248,197 - +0.5 4,248,232 + -0.9 4,248,233 - -0.2 4,248,233 - -0.9 4,248,240 + -0.1 4,248,240 + +0.3 4,248,241 - -0.5 4,248,241 - -0.7 4,248,241 - +0.4 4,248,241 - -0.3 4,248,244 + -0.1 4,248,244 + -2.3 4,248,244 + -0.3 4,248,244 + -0.7 4,248,244 + -1.1 4,248,245 - +1.3 4,248,245 - -0.9 4,248,312 + -0.8 4,248,312 + -1.2 4,248,313 - -0.1 4,248,313 - +0.1 4,248,403 + AO353_19385 0.15 +0.4 4,248,403 + AO353_19385 0.15 -0.2 4,248,403 + AO353_19385 0.15 -1.7 4,248,404 - AO353_19385 0.15 -0.3 4,248,404 - AO353_19385 0.15 +0.5 4,248,404 - AO353_19385 0.15 -1.7 4,248,404 - AO353_19385 0.15 -0.5
Or see this region's nucleotide sequence