Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_17970

Experiment: copper (II) chloride 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2.5 mM
3,953,590	+		AO353_17960	0.70	+0.5
3,953,591	-		AO353_17960	0.70	-0.8
3,953,833	+				+0.4
3,953,833	+				+1.1
3,953,833	+				-2.2
3,953,833	+				-2.5
3,953,833	+				-1.0
3,953,833	+				+0.1
3,953,833	+				-0.4
3,953,833	+				-0.4
3,953,833	+				+1.4
3,953,833	+				+0.1
3,953,833	+				-1.7
3,953,834	-				+1.2
3,953,834	-				+1.0
3,953,834	-				+0.3
3,953,834	-				-0.1
3,953,834	-				-0.6
3,953,834	-				-0.6
3,953,834	-				-0.4
3,953,834	-				+1.1
3,953,834	-				+0.1
3,953,834	-				+0.6
3,953,834	-				-0.1
3,953,834	-				+0.7
3,953,834	-				-1.5
3,953,834	-				+0.0
3,953,846	+				-2.1
3,953,847	-				-0.6
3,953,916	-		AO353_17965	0.15	-0.5
3,953,916	-		AO353_17965	0.15	-1.7
3,954,026	+		AO353_17965	0.35	-0.8
3,954,137	+		AO353_17965	0.56	-1.4
3,954,137	+		AO353_17965	0.56	-0.3
3,954,137	+		AO353_17965	0.56	-0.7
3,954,138	-		AO353_17965	0.56	-1.0
3,954,138	-		AO353_17965	0.56	-1.7
3,954,138	-		AO353_17965	0.56	-0.1
3,954,138	-		AO353_17965	0.56	-0.2
3,954,203	+		AO353_17965	0.68	+0.3
3,954,203	+		AO353_17965	0.68	+0.6
3,954,203	+		AO353_17965	0.68	-1.0
3,954,204	-		AO353_17965	0.68	-0.6
3,954,209	+		AO353_17965	0.69	-0.7
3,954,209	+		AO353_17965	0.69	-2.0
3,954,210	-		AO353_17965	0.69	+2.4
3,954,374	+				+0.6
3,954,374	+				+1.0
3,954,375	-				-1.1
3,954,375	-				+0.1
3,954,375	-				+1.1
3,954,387	-				-1.0
3,954,387	-				-0.2
3,954,448	+				+0.4
3,954,516	+				-2.2
3,954,516	+				+0.5
3,954,517	-				+1.7
3,954,517	-				-2.1
3,954,517	-				+1.3
3,954,517	-				-0.4
3,954,517	-				+0.1
3,954,520	+				-0.1
3,954,520	+				-0.5
3,954,521	-				-1.3
3,954,521	-				-0.4
3,954,521	-				-1.1
3,954,521	-				-0.0
3,954,521	-				-1.6
3,954,521	-				+1.2
3,954,521	-				+0.7
3,954,535	+				-2.6
3,954,535	+				-1.5
3,954,536	-				-0.5
3,954,536	-				-1.1
3,954,551	+				+0.1
3,954,551	+				-0.5
3,954,551	+				-0.1
3,954,552	-				-2.1
3,954,610	+				-0.5
3,954,610	+				-0.4
3,954,610	+				-1.0
3,954,610	+				-0.9
3,954,611	-				-0.5
3,954,611	-				-0.6
3,954,611	-				-2.1
3,954,611	-				-0.6
3,954,611	-				-0.9
3,954,611	-				-1.3
3,954,614	+				-1.9
3,954,614	+				-2.5
3,954,615	-				-0.9
3,954,615	-				-1.8
3,954,615	-				-0.8
3,954,615	-				+0.1
3,954,631	+				-0.4
3,954,632	-				+0.3
3,954,632	-				-0.6
3,954,692	+				+0.4
3,954,692	+				-2.1
3,954,692	+				-0.7
3,954,693	-				-0.6
3,954,693	-				-0.4
3,954,693	-				-1.6
3,954,693	-				-2.4
3,954,694	+				-1.8
3,954,695	-				-1.6
3,954,739	+		AO353_17970	0.10	-0.6
3,954,775	+		AO353_17970	0.12	-0.1
3,954,775	+		AO353_17970	0.12	-1.6
3,954,776	-		AO353_17970	0.12	-0.6
3,954,776	-		AO353_17970	0.12	-0.7
3,954,776	-		AO353_17970	0.12	-1.6
3,954,776	-		AO353_17970	0.12	-0.1
3,954,776	-		AO353_17970	0.12	+1.4
3,954,791	-		AO353_17970	0.13	-1.1
3,954,886	+		AO353_17970	0.17	-1.9
3,954,886	+		AO353_17970	0.17	-1.6
3,954,886	+		AO353_17970	0.17	-0.9
3,954,886	+		AO353_17970	0.17	+0.3
3,954,886	+		AO353_17970	0.17	+0.1
3,954,886	+		AO353_17970	0.17	-1.9
3,954,886	+		AO353_17970	0.17	-1.0
3,954,886	+		AO353_17970	0.17	-1.6
3,954,886	+		AO353_17970	0.17	-1.2
3,954,886	+		AO353_17970	0.17	-0.1
3,954,886	+		AO353_17970	0.17	-1.3
3,954,886	+		AO353_17970	0.17	-0.8
3,954,886	+		AO353_17970	0.17	-2.3
3,954,886	+		AO353_17970	0.17	-2.6
3,954,886	+		AO353_17970	0.17	-0.8
3,954,887	-		AO353_17970	0.17	-1.1
3,954,887	-		AO353_17970	0.17	-0.5
3,954,887	-		AO353_17970	0.17	+0.3
3,954,887	-		AO353_17970	0.17	-0.1
3,954,887	-		AO353_17970	0.17	-0.6
3,954,887	-		AO353_17970	0.17	-1.0
3,954,887	-		AO353_17970	0.17	-0.4
3,954,887	-		AO353_17970	0.17	-0.6
3,954,887	-		AO353_17970	0.17	-0.4
3,954,887	-		AO353_17970	0.17	-1.0
3,954,887	-		AO353_17970	0.17	-1.5
3,954,997	+		AO353_17970	0.23	-0.0
3,954,997	+		AO353_17970	0.23	+0.3
3,954,997	+		AO353_17970	0.23	-0.8
3,954,998	-		AO353_17970	0.23	-0.4
3,954,998	-		AO353_17970	0.23	-0.9
3,954,998	-		AO353_17970	0.23	+0.4
3,955,027	+		AO353_17970	0.24	-1.0
3,955,028	-		AO353_17970	0.24	-1.4
3,955,028	-		AO353_17970	0.24	-1.3
3,955,028	-		AO353_17970	0.24	-2.5
3,955,081	+		AO353_17970	0.27	-1.6
3,955,081	+		AO353_17970	0.27	-0.3
3,955,081	+		AO353_17970	0.27	-1.4
3,955,081	+		AO353_17970	0.27	-0.1
3,955,082	-		AO353_17970	0.27	-1.0
3,955,082	-		AO353_17970	0.27	-1.5
3,955,186	+		AO353_17970	0.32	-1.1
3,955,186	+		AO353_17970	0.32	-1.8
3,955,186	+		AO353_17970	0.32	-1.7
3,955,187	-		AO353_17970	0.32	-1.6
3,955,187	-		AO353_17970	0.32	-0.4
3,955,187	-		AO353_17970	0.32	-1.5
3,955,187	-		AO353_17970	0.32	-1.5
3,955,187	-		AO353_17970	0.32	+0.9
3,955,222	+		AO353_17970	0.33	-1.8
3,955,223	-		AO353_17970	0.33	-0.9
3,955,239	-		AO353_17970	0.34	-0.5
3,955,239	-		AO353_17970	0.34	-0.6
3,955,240	+		AO353_17970	0.34	-1.3
3,955,240	+		AO353_17970	0.34	-0.0
3,955,240	+		AO353_17970	0.34	-0.7
3,955,240	+		AO353_17970	0.34	-1.5
3,955,241	-		AO353_17970	0.34	+0.2
3,955,241	-		AO353_17970	0.34	-0.6
3,955,241	-		AO353_17970	0.34	-0.9
3,955,255	+		AO353_17970	0.35	-1.9
3,955,255	+		AO353_17970	0.35	-1.5
3,955,255	+		AO353_17970	0.35	-1.1
3,955,255	+		AO353_17970	0.35	-0.5
3,955,256	-		AO353_17970	0.35	-1.4
3,955,256	-		AO353_17970	0.35	-1.1
3,955,256	-		AO353_17970	0.35	-0.6
3,955,313	-		AO353_17970	0.38	+1.3
3,955,447	+		AO353_17970	0.44	-1.1
3,955,447	+		AO353_17970	0.44	-1.6
3,955,447	+		AO353_17970	0.44	-1.0
3,955,447	+		AO353_17970	0.44	-2.8
3,955,448	-		AO353_17970	0.44	-1.4
3,955,448	-		AO353_17970	0.44	-0.9
3,955,448	-		AO353_17970	0.44	+0.6
3,955,468	+		AO353_17970	0.45	-1.9
3,955,468	+		AO353_17970	0.45	-0.7
3,955,469	-		AO353_17970	0.45	+0.6
3,955,489	+		AO353_17970	0.46	-1.6
3,955,489	+		AO353_17970	0.46	-1.5
3,955,490	-		AO353_17970	0.46	-0.7
3,955,603	+		AO353_17970	0.51	-2.8
3,955,690	+		AO353_17970	0.55	-0.9
3,955,690	+		AO353_17970	0.55	+0.3
3,955,717	+		AO353_17970	0.57	-1.8
3,955,718	-		AO353_17970	0.57	-1.9
3,955,718	-		AO353_17970	0.57	-1.0
3,955,718	-		AO353_17970	0.57	-0.1
3,955,718	-		AO353_17970	0.57	-0.3
3,955,735	+		AO353_17970	0.58	-2.1
3,955,735	+		AO353_17970	0.58	-1.4
3,955,735	+		AO353_17970	0.58	-1.5
3,955,735	+		AO353_17970	0.58	-0.5
3,955,735	+		AO353_17970	0.58	-1.6
3,955,735	+		AO353_17970	0.58	-0.4
3,955,736	-		AO353_17970	0.58	-3.2
3,955,765	+		AO353_17970	0.59	-1.0
3,955,765	+		AO353_17970	0.59	-1.1
3,955,765	+		AO353_17970	0.59	-1.0
3,955,765	+		AO353_17970	0.59	-0.4
3,955,765	+		AO353_17970	0.59	-0.4
3,955,766	-		AO353_17970	0.59	-0.1
3,955,766	-		AO353_17970	0.59	-2.0
3,955,766	-		AO353_17970	0.59	-0.6
3,955,858	+		AO353_17970	0.63	-2.1
3,955,859	-		AO353_17970	0.63	-0.9
3,955,859	-		AO353_17970	0.63	-2.8
3,955,859	-		AO353_17970	0.63	-1.3
3,955,859	-		AO353_17970	0.63	+0.4
3,955,859	-		AO353_17970	0.63	-2.4
3,955,859	-		AO353_17970	0.63	-1.3
3,955,927	+		AO353_17970	0.67	+1.1
3,955,927	+		AO353_17970	0.67	-3.1
3,955,927	+		AO353_17970	0.67	-2.9
3,955,928	-		AO353_17970	0.67	-0.6
3,956,029	+		AO353_17970	0.71	+1.3
3,956,029	+		AO353_17970	0.71	-0.1
3,956,030	-		AO353_17970	0.72	+0.2
3,956,030	-		AO353_17970	0.72	-1.0
3,956,030	-		AO353_17970	0.72	-0.6
3,956,030	-		AO353_17970	0.72	-1.9
3,956,030	-		AO353_17970	0.72	-0.1
3,956,077	+		AO353_17970	0.74	-1.0
3,956,132	+		AO353_17970	0.76	-1.1
3,956,132	+		AO353_17970	0.76	-0.9
3,956,132	+		AO353_17970	0.76	-1.2
3,956,133	-		AO353_17970	0.76	-0.8
3,956,133	-		AO353_17970	0.76	-1.5
3,956,133	-		AO353_17970	0.76	-0.7
3,956,133	-		AO353_17970	0.76	-0.4
3,956,134	+		AO353_17970	0.76	-0.3
3,956,134	+		AO353_17970	0.76	-1.3
3,956,134	+		AO353_17970	0.76	-0.8
3,956,134	+		AO353_17970	0.76	-1.9
3,956,134	+		AO353_17970	0.76	-0.6
3,956,134	+		AO353_17970	0.76	-1.6
3,956,135	-		AO353_17970	0.77	-0.0
3,956,135	-		AO353_17970	0.77	-2.8
3,956,135	-		AO353_17970	0.77	-1.1
3,956,203	+		AO353_17970	0.80	-2.6
3,956,203	+		AO353_17970	0.80	-2.4
3,956,203	+		AO353_17970	0.80	-1.0
3,956,203	+		AO353_17970	0.80	-0.6
3,956,203	+		AO353_17970	0.80	+0.7
3,956,203	+		AO353_17970	0.80	-0.1
3,956,204	-		AO353_17970	0.80	-1.0
3,956,204	-		AO353_17970	0.80	-1.7
3,956,204	-		AO353_17970	0.80	-1.1
3,956,655	+				-1.4
3,956,655	+				+0.6
3,956,656	-				+0.1
3,956,656	-				+1.1
3,956,736	+				+1.4
3,956,736	+				-0.7
3,956,736	+				-0.7
3,956,736	+				-1.1
3,956,736	+				-0.4
3,956,736	+				-0.6
3,956,736	+				+0.1
3,956,736	+				-1.8
3,956,737	-				+0.4
3,956,737	-				+0.3
3,956,737	-				+1.4
3,956,737	-				-0.8
3,956,737	-				-0.7
3,956,737	-				-0.5
3,956,737	-				-0.7
3,956,898	+		AO353_17975	0.21	-0.9
3,957,040	-		AO353_17975	0.33	-1.0
3,957,040	-		AO353_17975	0.33	-0.6
3,957,040	-		AO353_17975	0.33	-0.7
3,957,040	-		AO353_17975	0.33	-0.7
3,957,114	+		AO353_17975	0.39	-0.5
3,957,114	+		AO353_17975	0.39	+1.0
3,957,114	+		AO353_17975	0.39	-2.2
3,957,114	+		AO353_17975	0.39	-0.7
3,957,115	-		AO353_17975	0.39	+0.3
3,957,115	-		AO353_17975	0.39	+0.1
3,957,115	-		AO353_17975	0.39	+0.7
3,957,115	-		AO353_17975	0.39	-0.5
3,957,115	-		AO353_17975	0.39	+2.4
3,957,115	-		AO353_17975	0.39	-0.2
3,957,162	+		AO353_17975	0.43	+0.3
3,957,162	+		AO353_17975	0.43	-0.7
3,957,163	-		AO353_17975	0.43	-1.8
3,957,163	-		AO353_17975	0.43	-1.5
3,957,163	-		AO353_17975	0.43	-1.0
3,957,163	-		AO353_17975	0.43	+1.1
3,957,171	+		AO353_17975	0.43	-0.1
3,957,172	-		AO353_17975	0.43	-2.3
3,957,172	-		AO353_17975	0.43	-0.4
3,957,172	-		AO353_17975	0.43	-0.1
3,957,376	+		AO353_17975	0.60	-0.6
3,957,377	-		AO353_17975	0.60	-0.3
3,957,489	+		AO353_17975	0.70	-0.1
3,957,489	+		AO353_17975	0.70	+1.6
3,957,489	+		AO353_17975	0.70	+0.2
3,957,489	+		AO353_17975	0.70	-0.4
3,957,490	-		AO353_17975	0.70	-1.3
3,957,490	-		AO353_17975	0.70	-0.0
3,957,490	-		AO353_17975	0.70	-1.5