Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_04825

Experiment: copper (II) chloride 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 2.5 mM
1,064,788	-				+0.3
1,064,860	+		AO353_04820	0.13	-0.7
1,064,860	+		AO353_04820	0.13	-1.4
1,064,860	+		AO353_04820	0.13	-0.7
1,064,861	-		AO353_04820	0.13	+0.7
1,064,861	-		AO353_04820	0.13	-0.5
1,064,861	-		AO353_04820	0.13	+0.2
1,064,861	-		AO353_04820	0.13	-3.2
1,064,879	+		AO353_04820	0.15	-1.3
1,064,879	+		AO353_04820	0.15	+0.9
1,064,879	+		AO353_04820	0.15	+0.6
1,064,879	+		AO353_04820	0.15	-1.0
1,064,879	+		AO353_04820	0.15	-0.7
1,064,879	+		AO353_04820	0.15	-0.3
1,064,879	+		AO353_04820	0.15	-1.5
1,064,879	+		AO353_04820	0.15	+0.3
1,064,880	-		AO353_04820	0.16	-0.8
1,064,880	-		AO353_04820	0.16	-1.1
1,064,880	-		AO353_04820	0.16	+0.4
1,064,880	-		AO353_04820	0.16	-0.6
1,064,880	-		AO353_04820	0.16	-0.3
1,064,880	-		AO353_04820	0.16	+0.5
1,064,880	-		AO353_04820	0.16	-0.3
1,064,880	-		AO353_04820	0.16	-0.8
1,064,880	-		AO353_04820	0.16	-0.9
1,064,880	-		AO353_04820	0.16	-0.2
1,064,880	-		AO353_04820	0.16	-1.8
1,064,880	-		AO353_04820	0.16	+0.7
1,064,880	-		AO353_04820	0.16	+0.2
1,064,880	-		AO353_04820	0.16	-0.8
1,064,880	-		AO353_04820	0.16	+0.3
1,064,880	-		AO353_04820	0.16	+1.9
1,064,893	-		AO353_04820	0.17	-0.5
1,064,922	+		AO353_04820	0.21	-0.1
1,064,958	-		AO353_04820	0.26	+0.6
1,064,978	-		AO353_04820	0.29	+1.4
1,065,029	-		AO353_04820	0.36	+0.9
1,065,033	+		AO353_04820	0.36	+0.6
1,065,033	+		AO353_04820	0.36	+0.8
1,065,041	+		AO353_04820	0.37	+0.4
1,065,042	-		AO353_04820	0.37	+0.7
1,065,047	+		AO353_04820	0.38	-1.9
1,065,047	+		AO353_04820	0.38	-1.6
1,065,047	+		AO353_04820	0.38	+0.5
1,065,047	+		AO353_04820	0.38	+0.1
1,065,047	+		AO353_04820	0.38	-2.3
1,065,047	+		AO353_04820	0.38	+0.7
1,065,047	+		AO353_04820	0.38	+2.3
1,065,048	-		AO353_04820	0.38	+1.5
1,065,048	-		AO353_04820	0.38	-0.6
1,065,048	-		AO353_04820	0.38	-0.2
1,065,048	-		AO353_04820	0.38	+1.1
1,065,048	-		AO353_04820	0.38	-1.1
1,065,048	-		AO353_04820	0.38	+1.3
1,065,126	-		AO353_04820	0.49	+0.2
1,065,312	+		AO353_04820	0.74	+0.7
1,065,442	+				-0.5
1,065,462	+				-0.3
1,065,462	+				-0.2
1,065,462	+				+0.1
1,065,490	-				-0.2
1,065,539	+				-1.4
1,065,586	+				+0.3
1,065,595	+				-1.3
1,065,667	+				+0.2
1,065,735	+				-2.9
1,065,735	+				-0.3
1,065,735	+				-1.4
1,065,736	-				-1.3
1,065,736	-				+0.5
1,065,741	+				-0.6
1,065,742	-				-2.4
1,065,826	-		AO353_04825	0.14	-0.5
1,065,826	-		AO353_04825	0.14	-2.1
1,065,881	+		AO353_04825	0.21	-2.9
1,065,881	+		AO353_04825	0.21	-0.1
1,065,882	-		AO353_04825	0.21	-0.2
1,065,895	+		AO353_04825	0.22	-0.2
1,065,896	-		AO353_04825	0.22	-0.4
1,065,998	+		AO353_04825	0.34	-1.6
1,065,998	+		AO353_04825	0.34	-2.3
1,065,998	+		AO353_04825	0.34	-2.5
1,065,999	-		AO353_04825	0.34	+0.2
1,066,018	-		AO353_04825	0.36	-2.3
1,066,055	+		AO353_04825	0.41	-1.8
1,066,056	-		AO353_04825	0.41	+0.3
1,066,088	+		AO353_04825	0.45	-1.7
1,066,088	+		AO353_04825	0.45	-2.4
1,066,088	+		AO353_04825	0.45	-0.4
1,066,089	-		AO353_04825	0.45	-1.9
1,066,089	-		AO353_04825	0.45	-1.0
1,066,089	-		AO353_04825	0.45	-0.7
1,066,331	+		AO353_04825	0.73	-0.7
1,066,391	-		AO353_04825	0.80	-0.7
1,066,484	+				-1.0
1,066,484	+				-2.8
1,066,484	+				-1.2
1,066,484	+				-0.9
1,066,484	+				-0.5
1,066,484	+				-1.5
1,066,484	+				-0.8
1,066,484	+				-0.3
1,066,484	+				-1.0
1,066,484	+				+0.0
1,066,484	+				-0.6
1,066,484	+				+0.7
1,066,484	+				-1.0
1,066,484	+				-2.5
1,066,485	-				-1.6
1,066,485	-				+0.3
1,066,485	-				-1.3
1,066,485	-				-1.1
1,066,485	-				-1.5
1,066,485	-				-1.5
1,066,485	-				-0.4
1,066,485	-				-0.7
1,066,485	-				-1.3
1,066,485	-				-0.8
1,066,485	-				+0.8
1,066,485	-				-2.1
1,066,584	+				-1.8
1,066,584	+				-1.1
1,066,584	+				+0.0
1,066,585	-				+0.8
1,066,585	-				-0.6
1,066,585	-				-1.1
1,066,746	+		AO353_04830	0.84	-1.4
1,066,746	+		AO353_04830	0.84	-1.2
1,066,746	+		AO353_04830	0.84	+0.3
1,066,746	+		AO353_04830	0.84	-1.9
1,066,746	+		AO353_04830	0.84	+0.8
1,066,746	+		AO353_04830	0.84	-0.7
1,066,746	+		AO353_04830	0.84	-1.1
1,066,746	+		AO353_04830	0.84	-1.6
1,066,747	-		AO353_04830	0.85	-0.1
1,066,747	-		AO353_04830	0.85	-0.5
1,066,747	-		AO353_04830	0.85	-2.0
1,066,747	-		AO353_04830	0.85	-1.6
1,066,747	-		AO353_04830	0.85	+0.4
1,066,747	-		AO353_04830	0.85	+0.6
1,066,747	-		AO353_04830	0.85	-0.9
1,066,747	-		AO353_04830	0.85	-1.5
1,066,747	-		AO353_04830	0.85	-2.5
1,066,747	-		AO353_04830	0.85	-1.5
1,066,855	+				-0.7
1,066,855	+				-0.9
1,066,855	+				-0.7
1,066,855	+				-1.4
1,066,855	+				-1.9
1,066,856	-				+0.6
1,066,856	-				-2.0
1,066,856	-				-1.4
1,066,856	-				-2.0
1,066,856	-				-1.3
1,066,856	-				-1.1
1,066,856	-				-2.9
1,066,856	-				-2.3
1,066,856	-				-3.3
1,066,856	-				-2.2
1,067,051	-		AO353_04835	0.13	-0.9
1,067,156	+		AO353_04835	0.18	-0.2
1,067,156	+		AO353_04835	0.18	-0.7
1,067,157	-		AO353_04835	0.18	-2.5
1,067,157	-		AO353_04835	0.18	-1.0
1,067,179	+		AO353_04835	0.19	-2.2
1,067,179	+		AO353_04835	0.19	-1.9
1,067,179	+		AO353_04835	0.19	-0.8
1,067,180	-		AO353_04835	0.19	-1.3
1,067,180	-		AO353_04835	0.19	-1.6
1,067,371	+		AO353_04835	0.28	-1.1
1,067,372	-		AO353_04835	0.28	-1.0
1,067,372	-		AO353_04835	0.28	-1.8
1,067,372	-		AO353_04835	0.28	-0.4
1,067,372	-		AO353_04835	0.28	-1.1
1,067,372	-		AO353_04835	0.28	-1.2
1,067,372	-		AO353_04835	0.28	-1.3
1,067,372	-		AO353_04835	0.28	-1.8
1,067,389	+		AO353_04835	0.28	+0.0
1,067,389	+		AO353_04835	0.28	-1.3
1,067,390	-		AO353_04835	0.28	+0.6
1,067,390	-		AO353_04835	0.28	-2.2
1,067,390	-		AO353_04835	0.28	+0.9
1,067,398	+		AO353_04835	0.29	-0.7
1,067,398	+		AO353_04835	0.29	-0.9
1,067,399	-		AO353_04835	0.29	-1.3
1,067,399	-		AO353_04835	0.29	-0.7
1,067,399	-		AO353_04835	0.29	-2.4
1,067,467	+		AO353_04835	0.32	-1.5
1,067,467	+		AO353_04835	0.32	-2.1