Experiment: copper (II) chloride 2.5 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01480 and AO353_01485 overlap by 4 nucleotides AO353_01485 and AO353_01490 are separated by 133 nucleotides AO353_01490 and AO353_01495 are separated by 45 nucleotides
AO353_01480: AO353_01480 - hypothetical protein, at 317,237 to 318,016
_01480
AO353_01485: AO353_01485 - ABC transporter, at 318,013 to 318,945
_01485
AO353_01490: AO353_01490 - glutathione S-transferase, at 319,079 to 319,702
_01490
AO353_01495: AO353_01495 - cysteine protease, at 319,748 to 320,407
_01495
Position (kb) 318
319 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 317.117 kb on + strand at 317.117 kb on + strand at 317.131 kb on + strand at 317.132 kb on - strand at 317.158 kb on + strand at 317.158 kb on + strand at 317.159 kb on - strand at 317.159 kb on - strand at 317.159 kb on - strand at 317.159 kb on - strand at 317.159 kb on - strand at 317.159 kb on - strand at 317.161 kb on + strand at 317.161 kb on + strand at 317.162 kb on - strand at 317.162 kb on - strand at 317.162 kb on - strand at 317.162 kb on - strand at 317.162 kb on - strand at 317.162 kb on - strand at 317.238 kb on + strand at 317.238 kb on + strand at 317.238 kb on + strand at 317.238 kb on + strand at 317.239 kb on - strand at 317.239 kb on - strand at 317.239 kb on - strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.286 kb on + strand at 317.287 kb on - strand at 317.287 kb on - strand at 317.287 kb on - strand at 317.287 kb on - strand at 317.287 kb on - strand at 317.294 kb on + strand at 317.294 kb on + strand at 317.295 kb on - strand at 317.304 kb on - strand at 317.304 kb on - strand at 317.317 kb on + strand, within AO353_01480 at 317.443 kb on - strand, within AO353_01480 at 317.443 kb on - strand, within AO353_01480 at 317.443 kb on - strand, within AO353_01480 at 317.461 kb on - strand, within AO353_01480 at 317.461 kb on - strand, within AO353_01480 at 317.461 kb on - strand, within AO353_01480 at 317.585 kb on - strand, within AO353_01480 at 317.682 kb on + strand, within AO353_01480 at 317.683 kb on - strand, within AO353_01480 at 317.782 kb on - strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.826 kb on + strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.827 kb on - strand, within AO353_01480 at 317.833 kb on + strand, within AO353_01480 at 317.833 kb on + strand, within AO353_01480 at 317.834 kb on - strand, within AO353_01480 at 317.834 kb on - strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.835 kb on + strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.836 kb on - strand, within AO353_01480 at 317.851 kb on + strand, within AO353_01480 at 317.878 kb on + strand, within AO353_01480 at 317.895 kb on + strand, within AO353_01480 at 317.895 kb on + strand, within AO353_01480 at 317.896 kb on - strand, within AO353_01480 at 317.896 kb on - strand, within AO353_01480 at 317.947 kb on + strand at 317.977 kb on + strand at 317.977 kb on + strand at 318.016 kb on + strand at 318.017 kb on - strand at 318.017 kb on - strand at 318.282 kb on + strand, within AO353_01485 at 318.362 kb on + strand, within AO353_01485 at 318.363 kb on - strand, within AO353_01485 at 318.363 kb on - strand, within AO353_01485 at 318.363 kb on - strand, within AO353_01485 at 318.587 kb on + strand, within AO353_01485 at 318.587 kb on + strand, within AO353_01485 at 318.587 kb on + strand, within AO353_01485 at 318.588 kb on - strand, within AO353_01485 at 318.588 kb on - strand, within AO353_01485 at 318.588 kb on - strand, within AO353_01485 at 318.588 kb on - strand, within AO353_01485 at 318.588 kb on - strand, within AO353_01485 at 318.629 kb on + strand, within AO353_01485 at 318.629 kb on + strand, within AO353_01485 at 318.632 kb on + strand, within AO353_01485 at 318.652 kb on + strand, within AO353_01485 at 318.652 kb on + strand, within AO353_01485 at 318.652 kb on + strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.653 kb on - strand, within AO353_01485 at 318.756 kb on + strand, within AO353_01485 at 318.756 kb on + strand, within AO353_01485 at 318.756 kb on + strand, within AO353_01485 at 318.756 kb on + strand, within AO353_01485 at 318.756 kb on + strand, within AO353_01485 at 318.757 kb on - strand, within AO353_01485 at 318.757 kb on - strand, within AO353_01485 at 318.905 kb on + strand at 318.905 kb on + strand at 318.906 kb on - strand at 318.906 kb on - strand at 318.906 kb on - strand at 318.954 kb on + strand at 318.955 kb on - strand at 318.955 kb on - strand at 318.980 kb on + strand at 318.980 kb on + strand at 318.980 kb on + strand at 318.980 kb on + strand at 318.984 kb on + strand at 318.984 kb on + strand at 318.984 kb on + strand at 318.984 kb on + strand at 318.984 kb on + strand at 318.984 kb on + strand at 318.985 kb on - strand at 318.985 kb on - strand at 318.985 kb on - strand at 318.985 kb on - strand at 318.985 kb on - strand at 319.052 kb on + strand at 319.052 kb on + strand at 319.052 kb on + strand at 319.052 kb on + strand at 319.052 kb on + strand at 319.053 kb on - strand at 319.053 kb on - strand at 319.053 kb on - strand at 319.070 kb on + strand at 319.070 kb on + strand at 319.070 kb on + strand at 319.070 kb on + strand at 319.071 kb on - strand at 319.077 kb on + strand at 319.077 kb on + strand at 319.077 kb on + strand at 319.077 kb on + strand at 319.077 kb on + strand at 319.078 kb on - strand at 319.080 kb on + strand at 319.080 kb on + strand at 319.080 kb on + strand at 319.080 kb on + strand at 319.080 kb on + strand at 319.080 kb on + strand at 319.080 kb on + strand at 319.080 kb on + strand at 319.080 kb on + strand at 319.080 kb on + strand at 319.080 kb on + strand at 319.081 kb on - strand at 319.081 kb on - strand at 319.081 kb on - strand at 319.081 kb on - strand at 319.081 kb on - strand at 319.081 kb on - strand at 319.081 kb on - strand at 319.081 kb on - strand at 319.081 kb on - strand at 319.081 kb on - strand at 319.137 kb on + strand at 319.138 kb on - strand at 319.194 kb on + strand, within AO353_01490 at 319.194 kb on + strand, within AO353_01490 at 319.194 kb on + strand, within AO353_01490 at 319.194 kb on + strand, within AO353_01490 at 319.194 kb on + strand, within AO353_01490 at 319.194 kb on + strand, within AO353_01490 at 319.194 kb on + strand, within AO353_01490 at 319.194 kb on + strand, within AO353_01490 at 319.194 kb on + strand, within AO353_01490 at 319.194 kb on + strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.195 kb on - strand, within AO353_01490 at 319.198 kb on + strand, within AO353_01490 at 319.198 kb on + strand, within AO353_01490 at 319.198 kb on + strand, within AO353_01490 at 319.199 kb on - strand, within AO353_01490 at 319.199 kb on - strand, within AO353_01490 at 319.199 kb on - strand, within AO353_01490 at 319.199 kb on - strand, within AO353_01490 at 319.199 kb on - strand, within AO353_01490 at 319.199 kb on - strand, within AO353_01490 at 319.199 kb on - strand, within AO353_01490 at 319.248 kb on + strand, within AO353_01490 at 319.248 kb on + strand, within AO353_01490 at 319.248 kb on + strand, within AO353_01490 at 319.248 kb on + strand, within AO353_01490 at 319.248 kb on + strand, within AO353_01490 at 319.249 kb on - strand, within AO353_01490 at 319.249 kb on - strand, within AO353_01490 at 319.249 kb on - strand, within AO353_01490 at 319.249 kb on - strand, within AO353_01490 at 319.249 kb on - strand, within AO353_01490 at 319.249 kb on - strand, within AO353_01490 at 319.355 kb on + strand, within AO353_01490 at 319.355 kb on + strand, within AO353_01490 at 319.356 kb on - strand, within AO353_01490 at 319.356 kb on - strand, within AO353_01490 at 319.356 kb on - strand, within AO353_01490 at 319.623 kb on + strand, within AO353_01490 at 319.623 kb on + strand, within AO353_01490 at 319.623 kb on + strand, within AO353_01490 at 319.737 kb on + strand at 319.819 kb on - strand, within AO353_01495 at 319.887 kb on + strand, within AO353_01495 at 319.887 kb on + strand, within AO353_01495 at 319.888 kb on - strand, within AO353_01495 at 319.888 kb on - strand, within AO353_01495 at 319.888 kb on - strand, within AO353_01495 at 319.888 kb on - strand, within AO353_01495
Per-strain Table
Position Strand Gene LocusTag Fraction copper (II) chloride 2.5 mM remove 317,117 + -0.4 317,117 + +1.0 317,131 + -1.1 317,132 - -1.0 317,158 + +1.3 317,158 + +1.2 317,159 - +0.5 317,159 - +1.4 317,159 - -1.3 317,159 - -0.4 317,159 - -0.8 317,159 - -0.1 317,161 + -0.1 317,161 + +0.6 317,162 - +0.1 317,162 - -0.7 317,162 - -0.1 317,162 - -1.9 317,162 - +0.3 317,162 - -1.0 317,238 + +1.2 317,238 + +0.3 317,238 + -1.5 317,238 + -0.9 317,239 - -1.0 317,239 - +0.3 317,239 - -0.2 317,286 + +2.1 317,286 + -1.3 317,286 + +0.5 317,286 + -1.0 317,286 + -0.4 317,286 + -0.9 317,286 + -2.2 317,286 + -0.2 317,286 + -1.9 317,286 + +0.6 317,286 + -1.5 317,287 - -0.0 317,287 - -1.2 317,287 - -0.9 317,287 - +0.3 317,287 - -1.0 317,294 + +0.2 317,294 + -1.9 317,295 - +0.5 317,304 - +0.1 317,304 - +0.4 317,317 + AO353_01480 0.10 +0.3 317,443 - AO353_01480 0.26 +0.1 317,443 - AO353_01480 0.26 -0.5 317,443 - AO353_01480 0.26 -0.3 317,461 - AO353_01480 0.29 -1.3 317,461 - AO353_01480 0.29 -0.7 317,461 - AO353_01480 0.29 +0.7 317,585 - AO353_01480 0.45 -1.7 317,682 + AO353_01480 0.57 -1.3 317,683 - AO353_01480 0.57 -3.2 317,782 - AO353_01480 0.70 -0.4 317,826 + AO353_01480 0.76 -1.3 317,826 + AO353_01480 0.76 -1.7 317,826 + AO353_01480 0.76 -1.3 317,826 + AO353_01480 0.76 +0.3 317,826 + AO353_01480 0.76 +1.7 317,826 + AO353_01480 0.76 -0.6 317,827 - AO353_01480 0.76 +0.5 317,827 - AO353_01480 0.76 -1.6 317,827 - AO353_01480 0.76 -1.3 317,827 - AO353_01480 0.76 -0.0 317,827 - AO353_01480 0.76 -0.4 317,827 - AO353_01480 0.76 -0.6 317,827 - AO353_01480 0.76 -0.9 317,827 - AO353_01480 0.76 -0.3 317,827 - AO353_01480 0.76 -1.7 317,827 - AO353_01480 0.76 -1.6 317,833 + AO353_01480 0.76 -2.3 317,833 + AO353_01480 0.76 +0.4 317,834 - AO353_01480 0.77 -0.3 317,834 - AO353_01480 0.77 +0.3 317,835 + AO353_01480 0.77 -0.3 317,835 + AO353_01480 0.77 +2.3 317,835 + AO353_01480 0.77 -0.3 317,835 + AO353_01480 0.77 -2.9 317,835 + AO353_01480 0.77 -0.8 317,835 + AO353_01480 0.77 +0.2 317,835 + AO353_01480 0.77 +1.1 317,836 - AO353_01480 0.77 -0.2 317,836 - AO353_01480 0.77 -1.3 317,836 - AO353_01480 0.77 +0.0 317,836 - AO353_01480 0.77 -0.4 317,836 - AO353_01480 0.77 -1.5 317,836 - AO353_01480 0.77 -0.3 317,836 - AO353_01480 0.77 -1.2 317,836 - AO353_01480 0.77 -1.3 317,851 + AO353_01480 0.79 +1.3 317,878 + AO353_01480 0.82 -1.8 317,895 + AO353_01480 0.84 -1.3 317,895 + AO353_01480 0.84 -0.7 317,896 - AO353_01480 0.84 -0.9 317,896 - AO353_01480 0.84 -0.2 317,947 + +0.5 317,977 + -1.0 317,977 + -0.4 318,016 + -0.3 318,017 - +0.7 318,017 - -0.9 318,282 + AO353_01485 0.29 -0.5 318,362 + AO353_01485 0.37 -0.9 318,363 - AO353_01485 0.38 -1.5 318,363 - AO353_01485 0.38 +0.8 318,363 - AO353_01485 0.38 -2.2 318,587 + AO353_01485 0.62 -2.5 318,587 + AO353_01485 0.62 -1.3 318,587 + AO353_01485 0.62 -0.7 318,588 - AO353_01485 0.62 -1.3 318,588 - AO353_01485 0.62 -1.3 318,588 - AO353_01485 0.62 +1.1 318,588 - AO353_01485 0.62 -0.7 318,588 - AO353_01485 0.62 -0.3 318,629 + AO353_01485 0.66 +0.3 318,629 + AO353_01485 0.66 -2.7 318,632 + AO353_01485 0.66 -0.1 318,652 + AO353_01485 0.68 -1.2 318,652 + AO353_01485 0.68 -1.5 318,652 + AO353_01485 0.68 -0.6 318,653 - AO353_01485 0.69 -0.7 318,653 - AO353_01485 0.69 -0.7 318,653 - AO353_01485 0.69 -0.0 318,653 - AO353_01485 0.69 -0.4 318,653 - AO353_01485 0.69 +0.4 318,653 - AO353_01485 0.69 -1.3 318,653 - AO353_01485 0.69 -2.6 318,653 - AO353_01485 0.69 -1.4 318,756 + AO353_01485 0.80 -2.0 318,756 + AO353_01485 0.80 -1.8 318,756 + AO353_01485 0.80 +1.1 318,756 + AO353_01485 0.80 +0.9 318,756 + AO353_01485 0.80 +0.6 318,757 - AO353_01485 0.80 -0.0 318,757 - AO353_01485 0.80 -2.9 318,905 + -0.3 318,905 + -0.8 318,906 - -0.9 318,906 - +0.7 318,906 - +0.0 318,954 + -1.7 318,955 - +0.7 318,955 - +0.1 318,980 + -0.4 318,980 + -0.0 318,980 + -0.9 318,980 + -1.0 318,984 + -0.7 318,984 + +2.3 318,984 + -2.2 318,984 + +0.6 318,984 + -0.8 318,984 + -0.2 318,985 - -0.3 318,985 - -1.1 318,985 - -1.7 318,985 - -1.4 318,985 - +1.1 319,052 + -1.4 319,052 + -0.9 319,052 + +0.9 319,052 + -0.3 319,052 + +1.0 319,053 - -0.3 319,053 - +1.0 319,053 - -1.0 319,070 + -0.0 319,070 + -0.6 319,070 + +0.5 319,070 + +1.3 319,071 - -0.7 319,077 + -0.4 319,077 + +1.3 319,077 + +1.0 319,077 + -1.2 319,077 + +0.1 319,078 - -0.9 319,080 + -0.5 319,080 + +0.5 319,080 + -0.0 319,080 + -1.6 319,080 + -0.6 319,080 + -1.4 319,080 + -0.7 319,080 + -0.6 319,080 + -0.3 319,080 + -1.3 319,080 + +1.6 319,081 - +0.5 319,081 - +0.3 319,081 - -1.6 319,081 - -1.2 319,081 - +0.4 319,081 - +0.2 319,081 - +0.8 319,081 - -0.3 319,081 - +0.3 319,081 - +1.4 319,137 + -2.0 319,138 - +0.0 319,194 + AO353_01490 0.18 -1.3 319,194 + AO353_01490 0.18 -1.5 319,194 + AO353_01490 0.18 +0.2 319,194 + AO353_01490 0.18 -0.8 319,194 + AO353_01490 0.18 -0.9 319,194 + AO353_01490 0.18 +1.5 319,194 + AO353_01490 0.18 +1.0 319,194 + AO353_01490 0.18 +1.0 319,194 + AO353_01490 0.18 -0.7 319,194 + AO353_01490 0.18 -1.4 319,195 - AO353_01490 0.19 -0.6 319,195 - AO353_01490 0.19 -0.5 319,195 - AO353_01490 0.19 +0.1 319,195 - AO353_01490 0.19 -1.4 319,195 - AO353_01490 0.19 -0.2 319,195 - AO353_01490 0.19 -1.2 319,195 - AO353_01490 0.19 -0.2 319,195 - AO353_01490 0.19 +0.2 319,195 - AO353_01490 0.19 -2.8 319,195 - AO353_01490 0.19 +1.4 319,195 - AO353_01490 0.19 +0.4 319,195 - AO353_01490 0.19 +1.2 319,195 - AO353_01490 0.19 +2.1 319,195 - AO353_01490 0.19 -0.7 319,198 + AO353_01490 0.19 +0.3 319,198 + AO353_01490 0.19 -1.4 319,198 + AO353_01490 0.19 -0.4 319,199 - AO353_01490 0.19 +0.6 319,199 - AO353_01490 0.19 +1.0 319,199 - AO353_01490 0.19 -0.0 319,199 - AO353_01490 0.19 -0.0 319,199 - AO353_01490 0.19 -0.6 319,199 - AO353_01490 0.19 -0.7 319,199 - AO353_01490 0.19 +0.9 319,248 + AO353_01490 0.27 -0.5 319,248 + AO353_01490 0.27 +0.1 319,248 + AO353_01490 0.27 -0.6 319,248 + AO353_01490 0.27 +0.5 319,248 + AO353_01490 0.27 -1.5 319,249 - AO353_01490 0.27 -1.0 319,249 - AO353_01490 0.27 -0.3 319,249 - AO353_01490 0.27 -0.1 319,249 - AO353_01490 0.27 +0.4 319,249 - AO353_01490 0.27 -0.6 319,249 - AO353_01490 0.27 -0.5 319,355 + AO353_01490 0.44 -0.9 319,355 + AO353_01490 0.44 +0.3 319,356 - AO353_01490 0.44 +0.5 319,356 - AO353_01490 0.44 +0.3 319,356 - AO353_01490 0.44 +0.9 319,623 + AO353_01490 0.87 +0.7 319,623 + AO353_01490 0.87 +0.3 319,623 + AO353_01490 0.87 +0.1 319,737 + -0.7 319,819 - AO353_01495 0.11 +0.1 319,887 + AO353_01495 0.21 +1.5 319,887 + AO353_01495 0.21 +0.6 319,888 - AO353_01495 0.21 +0.3 319,888 - AO353_01495 0.21 +0.6 319,888 - AO353_01495 0.21 -0.8 319,888 - AO353_01495 0.21 -1.2
Or see this region's nucleotide sequence