Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS16715

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,772,368	+				+0.5
3,772,424	-				-2.1
3,772,469	-		ABZR86_RS16705	0.16	+0.8
3,772,469	-		ABZR86_RS16705	0.16	-1.0
3,772,479	+		ABZR86_RS16705	0.17	+0.2
3,772,480	-		ABZR86_RS16705	0.18	-0.2
3,772,480	-		ABZR86_RS16705	0.18	-3.1
3,772,553	+		ABZR86_RS16705	0.28	-0.7
3,772,562	+		ABZR86_RS16705	0.29	-0.2
3,772,562	+		ABZR86_RS16705	0.29	+0.1
3,772,562	+		ABZR86_RS16705	0.29	-0.2
3,772,562	+		ABZR86_RS16705	0.29	+2.1
3,772,562	+		ABZR86_RS16705	0.29	+0.0
3,772,563	-		ABZR86_RS16705	0.29	-0.3
3,772,563	-		ABZR86_RS16705	0.29	+0.7
3,772,563	-		ABZR86_RS16705	0.29	-0.4
3,772,660	-		ABZR86_RS16705	0.43	-0.7
3,772,660	-		ABZR86_RS16705	0.43	+1.0
3,772,660	-		ABZR86_RS16705	0.43	+1.6
3,772,660	-		ABZR86_RS16705	0.43	+0.6
3,772,693	+		ABZR86_RS16705	0.48	-0.5
3,772,694	-		ABZR86_RS16705	0.48	+1.6
3,772,694	-		ABZR86_RS16705	0.48	-0.2
3,772,715	+		ABZR86_RS16705	0.51	-0.9
3,772,721	-		ABZR86_RS16705	0.52	+0.9
3,772,755	+		ABZR86_RS16705	0.57	+1.4
3,772,756	-		ABZR86_RS16705	0.57	+0.5
3,772,774	+		ABZR86_RS16705	0.59	+0.5
3,772,774	+		ABZR86_RS16705	0.59	+0.3
3,772,775	-		ABZR86_RS16705	0.60	-0.3
3,772,793	+		ABZR86_RS16705	0.62	+0.0
3,772,793	+		ABZR86_RS16705	0.62	-0.6
3,772,931	+		ABZR86_RS16705	0.82	+0.7
3,772,982	-		ABZR86_RS16705	0.89	+1.1
3,773,063	+				+0.1
3,773,066	+				+0.3
3,773,066	+				-0.6
3,773,143	+		ABZR86_RS16710	0.27	+0.6
3,773,143	+		ABZR86_RS16710	0.27	+0.3
3,773,143	+		ABZR86_RS16710	0.27	-0.3
3,773,143	+		ABZR86_RS16710	0.27	+0.6
3,773,169	-		ABZR86_RS16710	0.35	-0.1
3,773,177	+		ABZR86_RS16710	0.38	+0.8
3,773,191	+		ABZR86_RS16710	0.43	-0.3
3,773,192	-		ABZR86_RS16710	0.43	+1.0
3,773,192	-		ABZR86_RS16710	0.43	-0.3
3,773,306	+		ABZR86_RS16710	0.81	+1.5
3,773,306	+		ABZR86_RS16710	0.81	+0.1
3,773,307	-		ABZR86_RS16710	0.81	-0.4
3,773,307	-		ABZR86_RS16710	0.81	+0.1
3,773,307	-		ABZR86_RS16710	0.81	-0.9
3,773,358	+				-0.1
3,773,359	-				+0.5
3,773,417	+				-0.3
3,773,418	-				-0.5
3,773,418	-				+1.1
3,773,426	+				-0.3
3,773,512	-				+0.5
3,773,530	-				+0.1
3,773,530	-				+0.4
3,773,590	+				+0.6
3,773,591	-				+0.7
3,773,591	-				-0.3
3,773,621	+				+0.0
3,773,727	-		ABZR86_RS16715	0.11	+1.3
3,773,737	+		ABZR86_RS16715	0.12	+0.3
3,773,737	+		ABZR86_RS16715	0.12	-0.8
3,773,768	+		ABZR86_RS16715	0.13	+0.3
3,773,768	+		ABZR86_RS16715	0.13	+1.0
3,773,768	+		ABZR86_RS16715	0.13	+0.2
3,773,769	-		ABZR86_RS16715	0.13	-1.1
3,773,799	-		ABZR86_RS16715	0.14	+0.0
3,773,862	+		ABZR86_RS16715	0.16	+0.0
3,773,871	+		ABZR86_RS16715	0.16	+0.3
3,773,885	+		ABZR86_RS16715	0.16	-0.4
3,773,885	+		ABZR86_RS16715	0.16	+0.1
3,773,886	-		ABZR86_RS16715	0.16	+1.1
3,773,927	+		ABZR86_RS16715	0.18	+0.5
3,773,928	-		ABZR86_RS16715	0.18	+0.3
3,774,113	-		ABZR86_RS16715	0.24	+0.2
3,774,160	+		ABZR86_RS16715	0.25	+1.3
3,774,161	-		ABZR86_RS16715	0.25	-2.2
3,774,161	-		ABZR86_RS16715	0.25	-0.6
3,774,267	+		ABZR86_RS16715	0.29	+0.0
3,774,267	+		ABZR86_RS16715	0.29	-0.3
3,774,267	+		ABZR86_RS16715	0.29	-0.6
3,774,267	+		ABZR86_RS16715	0.29	+0.7
3,774,268	-		ABZR86_RS16715	0.29	-0.4
3,774,460	+		ABZR86_RS16715	0.35	+0.6
3,774,460	+		ABZR86_RS16715	0.35	-0.1
3,774,460	+		ABZR86_RS16715	0.35	+1.4
3,774,472	+		ABZR86_RS16715	0.35	-0.7
3,774,473	-		ABZR86_RS16715	0.35	+2.8
3,774,473	-		ABZR86_RS16715	0.35	+0.4
3,774,473	-		ABZR86_RS16715	0.35	+0.7
3,774,476	+		ABZR86_RS16715	0.35	+0.4
3,774,477	-		ABZR86_RS16715	0.35	+0.2
3,774,506	+		ABZR86_RS16715	0.36	-1.4
3,774,563	+		ABZR86_RS16715	0.38	+2.3
3,774,766	+		ABZR86_RS16715	0.44	+0.1
3,774,767	-		ABZR86_RS16715	0.44	+0.8
3,774,767	-		ABZR86_RS16715	0.44	+1.0
3,774,814	+		ABZR86_RS16715	0.46	+0.3
3,774,815	-		ABZR86_RS16715	0.46	+1.5
3,774,815	-		ABZR86_RS16715	0.46	+0.4
3,774,815	-		ABZR86_RS16715	0.46	+0.1
3,775,160	+		ABZR86_RS16715	0.57	+0.5
3,775,160	+		ABZR86_RS16715	0.57	+0.4
3,775,227	-		ABZR86_RS16715	0.59	+0.4
3,775,244	-		ABZR86_RS16715	0.59	-0.4
3,775,273	+		ABZR86_RS16715	0.60	+0.6
3,775,273	+		ABZR86_RS16715	0.60	+0.4
3,775,274	-		ABZR86_RS16715	0.60	-0.4
3,775,331	+		ABZR86_RS16715	0.62	+1.9
3,775,361	-		ABZR86_RS16715	0.63	+0.9
3,775,396	+		ABZR86_RS16715	0.64	+1.5
3,775,402	+		ABZR86_RS16715	0.64	-0.3
3,775,403	-		ABZR86_RS16715	0.64	+0.0
3,775,403	-		ABZR86_RS16715	0.64	-0.2
3,775,501	+		ABZR86_RS16715	0.67	+0.2
3,775,501	+		ABZR86_RS16715	0.67	-0.5
3,775,588	+		ABZR86_RS16715	0.70	-0.9
3,775,588	+		ABZR86_RS16715	0.70	-0.1
3,775,604	-		ABZR86_RS16715	0.71	+0.3
3,775,682	-		ABZR86_RS16715	0.73	+0.7
3,775,682	-		ABZR86_RS16715	0.73	-0.9
3,775,742	-		ABZR86_RS16715	0.75	+0.9
3,775,742	-		ABZR86_RS16715	0.75	-0.5
3,775,762	+		ABZR86_RS16715	0.76	+1.3
3,775,763	-		ABZR86_RS16715	0.76	+0.4
3,775,763	-		ABZR86_RS16715	0.76	-0.2
3,775,901	-		ABZR86_RS16715	0.80	-0.2
3,775,901	-		ABZR86_RS16715	0.80	-0.2
3,776,021	-		ABZR86_RS16715	0.84	+0.8
3,776,021	-		ABZR86_RS16715	0.84	-0.8
3,776,056	+		ABZR86_RS16715	0.85	-0.1
3,776,102	-		ABZR86_RS16715	0.86	-0.1
3,776,102	-		ABZR86_RS16715	0.86	-0.0
3,776,138	+		ABZR86_RS16715	0.88	+1.1
3,776,139	-		ABZR86_RS16715	0.88	+0.3
3,776,195	+		ABZR86_RS16715	0.89	-0.1
3,776,536	-				-0.1
3,776,610	+		ABZR86_RS16720	0.11	+0.4
3,776,611	-		ABZR86_RS16720	0.12	+0.2
3,776,611	-		ABZR86_RS16720	0.12	-0.4
3,776,702	-		ABZR86_RS16720	0.25	+0.1
3,776,724	+		ABZR86_RS16720	0.29	-0.5
3,776,724	+		ABZR86_RS16720	0.29	+1.0
3,776,725	-		ABZR86_RS16720	0.29	-2.2
3,776,812	+		ABZR86_RS16720	0.42	+0.0
3,776,812	+		ABZR86_RS16720	0.42	-0.6
3,776,813	-		ABZR86_RS16720	0.42	-0.3
3,776,826	+		ABZR86_RS16720	0.44	+1.3
3,776,826	+		ABZR86_RS16720	0.44	+0.8
3,776,826	+		ABZR86_RS16720	0.44	+0.8
3,776,826	+		ABZR86_RS16720	0.44	-0.3
3,776,826	+		ABZR86_RS16720	0.44	-1.1
3,776,827	-		ABZR86_RS16720	0.44	+0.9
3,776,827	-		ABZR86_RS16720	0.44	-0.5
3,776,827	-		ABZR86_RS16720	0.44	+0.4
3,776,827	-		ABZR86_RS16720	0.44	+0.2
3,776,827	-		ABZR86_RS16720	0.44	+0.5
3,776,832	+		ABZR86_RS16720	0.45	-0.3
3,776,832	+		ABZR86_RS16720	0.45	+0.2
3,776,833	-		ABZR86_RS16720	0.45	-0.2
3,776,833	-		ABZR86_RS16720	0.45	+0.8
3,776,833	-		ABZR86_RS16720	0.45	+0.2
3,776,874	+		ABZR86_RS16720	0.51	+0.6
3,776,939	-		ABZR86_RS16720	0.61	-0.1
3,777,115	+		ABZR86_RS16720	0.87	+0.7
3,777,188	+				+0.6
3,777,229	+				+1.7
3,777,248	+				-1.3
3,777,318	+				-0.9
3,777,319	-				+1.1
3,777,319	-				+0.6
3,777,346	-		ABZR86_RS16725	0.11	-0.3
3,777,379	-		ABZR86_RS16725	0.15	-0.1
3,777,379	-		ABZR86_RS16725	0.15	+1.4
3,777,379	-		ABZR86_RS16725	0.15	+1.3
3,777,499	-		ABZR86_RS16725	0.32	+0.1