Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS06490

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
1,438,207	+		ABZR86_RS06480	0.76	-1.8
1,438,207	+		ABZR86_RS06480	0.76	-1.2
1,438,208	-		ABZR86_RS06480	0.76	-0.0
1,438,208	-		ABZR86_RS06480	0.76	+0.0
1,438,378	+		ABZR86_RS06480	0.86	-0.5
1,438,400	-		ABZR86_RS06480	0.87	-0.2
1,438,538	+				+0.8
1,438,538	+				-0.5
1,438,538	+				+1.0
1,438,538	+				+1.1
1,438,539	-				+0.4
1,438,539	-				+0.5
1,438,539	-				-0.1
1,438,539	-				+1.3
1,438,539	-				+0.9
1,438,587	+				-0.2
1,438,617	+				-0.3
1,438,637	+				+0.5
1,438,638	-				+0.6
1,438,638	-				+0.7
1,438,638	-				+0.1
1,438,644	+				+1.4
1,438,645	-				+1.0
1,438,645	-				+0.2
1,438,673	+				-0.1
1,438,694	+		ABZR86_RS06485	0.13	+0.3
1,438,694	+		ABZR86_RS06485	0.13	+1.2
1,438,695	-		ABZR86_RS06485	0.13	-0.6
1,438,703	+		ABZR86_RS06485	0.14	-0.2
1,438,704	-		ABZR86_RS06485	0.15	+0.6
1,438,720	+		ABZR86_RS06485	0.17	+0.0
1,438,721	-		ABZR86_RS06485	0.18	+0.5
1,438,773	+		ABZR86_RS06485	0.26	+1.0
1,438,783	-		ABZR86_RS06485	0.28	+0.0
1,438,821	+		ABZR86_RS06485	0.35	-0.1
1,438,931	+		ABZR86_RS06485	0.53	-0.1
1,438,932	-		ABZR86_RS06485	0.53	+2.6
1,438,932	-		ABZR86_RS06485	0.53	+0.5
1,438,962	+		ABZR86_RS06485	0.59	+0.7
1,438,962	+		ABZR86_RS06485	0.59	-0.1
1,438,962	+		ABZR86_RS06485	0.59	+0.6
1,438,963	-		ABZR86_RS06485	0.59	-0.7
1,438,963	-		ABZR86_RS06485	0.59	+0.0
1,438,963	-		ABZR86_RS06485	0.59	+0.3
1,438,997	+		ABZR86_RS06485	0.64	+0.4
1,438,997	+		ABZR86_RS06485	0.64	+0.3
1,438,998	-		ABZR86_RS06485	0.65	-0.9
1,439,071	+		ABZR86_RS06485	0.77	-0.1
1,439,071	+		ABZR86_RS06485	0.77	+0.3
1,439,144	+		ABZR86_RS06485	0.89	+0.1
1,439,162	+				+0.0
1,439,162	+				+0.5
1,439,163	-				+0.3
1,439,394	+				+0.2
1,439,395	-				-0.4
1,439,395	-				+0.3
1,439,395	-				-1.1
1,439,404	-				-0.2
1,439,408	+				-0.3
1,439,408	+				+0.6
1,439,408	+				+1.3
1,439,409	-				+0.3
1,439,409	-				-0.2
1,439,409	-				-1.3
1,439,459	+		ABZR86_RS06490	0.10	-0.1
1,439,528	-		ABZR86_RS06490	0.13	+0.2
1,439,568	+		ABZR86_RS06490	0.15	+0.3
1,439,568	+		ABZR86_RS06490	0.15	-0.2
1,439,568	+		ABZR86_RS06490	0.15	+0.6
1,439,569	-		ABZR86_RS06490	0.15	+0.2
1,439,569	-		ABZR86_RS06490	0.15	+0.3
1,439,607	+		ABZR86_RS06490	0.17	+0.3
1,439,608	-		ABZR86_RS06490	0.17	-0.4
1,439,749	-		ABZR86_RS06490	0.22	+0.2
1,439,825	+		ABZR86_RS06490	0.25	+0.4
1,439,825	+		ABZR86_RS06490	0.25	-1.3
1,439,825	+		ABZR86_RS06490	0.25	-0.1
1,439,826	-		ABZR86_RS06490	0.25	+1.7
1,439,826	-		ABZR86_RS06490	0.25	-0.1
1,439,893	+		ABZR86_RS06490	0.28	-0.3
1,439,893	+		ABZR86_RS06490	0.28	+0.4
1,439,894	-		ABZR86_RS06490	0.28	+0.3
1,440,059	+		ABZR86_RS06490	0.35	+1.4
1,440,203	+		ABZR86_RS06490	0.41	-0.5
1,440,203	+		ABZR86_RS06490	0.41	+0.4
1,440,204	-		ABZR86_RS06490	0.41	+0.2
1,440,204	-		ABZR86_RS06490	0.41	-1.3
1,440,310	+		ABZR86_RS06490	0.45	-0.1
1,440,450	+		ABZR86_RS06490	0.51	+0.3
1,440,450	+		ABZR86_RS06490	0.51	-0.2
1,440,630	-		ABZR86_RS06490	0.58	+0.1
1,440,630	-		ABZR86_RS06490	0.58	-0.7
1,440,640	+		ABZR86_RS06490	0.59	+0.1
1,440,640	+		ABZR86_RS06490	0.59	-0.0
1,440,641	-		ABZR86_RS06490	0.59	-0.2
1,440,668	+		ABZR86_RS06490	0.60	+1.1
1,440,668	+		ABZR86_RS06490	0.60	+0.1
1,440,668	+		ABZR86_RS06490	0.60	-2.3
1,440,669	-		ABZR86_RS06490	0.60	+0.0
1,440,669	-		ABZR86_RS06490	0.60	-0.4
1,440,669	-		ABZR86_RS06490	0.60	-0.6
1,440,683	-		ABZR86_RS06490	0.60	+1.1
1,440,793	+		ABZR86_RS06490	0.65	+1.4
1,440,793	+		ABZR86_RS06490	0.65	-0.2
1,440,793	+		ABZR86_RS06490	0.65	+0.4
1,440,794	-		ABZR86_RS06490	0.65	-0.1
1,440,814	+		ABZR86_RS06490	0.66	-0.3
1,440,815	-		ABZR86_RS06490	0.66	+0.5
1,440,815	-		ABZR86_RS06490	0.66	+1.4
1,440,815	-		ABZR86_RS06490	0.66	+1.3
1,440,815	-		ABZR86_RS06490	0.66	-0.0
1,440,815	-		ABZR86_RS06490	0.66	+1.1
1,440,884	+		ABZR86_RS06490	0.69	+0.1
1,440,983	+		ABZR86_RS06490	0.73	+0.4
1,440,983	+		ABZR86_RS06490	0.73	+0.5
1,440,984	-		ABZR86_RS06490	0.73	-0.5
1,440,984	-		ABZR86_RS06490	0.73	-0.8
1,441,074	+		ABZR86_RS06490	0.76	-0.7
1,441,075	-		ABZR86_RS06490	0.76	+0.4
1,441,109	-		ABZR86_RS06490	0.78	-0.1
1,441,277	-		ABZR86_RS06490	0.85	+0.2
1,441,357	+		ABZR86_RS06490	0.88	-0.4
1,441,358	-		ABZR86_RS06490	0.88	+1.2
1,441,358	-		ABZR86_RS06490	0.88	-0.0
1,441,358	-		ABZR86_RS06490	0.88	+0.4
1,441,358	-		ABZR86_RS06490	0.88	-0.2
1,441,358	-		ABZR86_RS06490	0.88	-0.2
1,441,369	+		ABZR86_RS06490	0.88	+0.1
1,441,420	+				-0.1
1,441,420	+				-0.2
1,441,421	-				+1.2
1,441,421	-				-2.8
1,441,421	-				+0.0
1,441,424	+				+0.2
1,441,424	+				+0.2
1,441,424	+				+0.1
1,441,424	+				-0.7
1,441,425	-				-0.7
1,441,425	-				+0.7
1,441,425	-				-0.8
1,441,480	+				+0.3
1,441,480	+				-0.3
1,441,480	+				+0.4
1,441,481	-				-0.6
1,441,481	-				+0.0
1,441,492	+				-0.9
1,441,493	-				+0.3
1,441,515	+				-2.0
1,441,515	+				+0.4
1,441,515	+				-0.2
1,441,516	-				+1.0
1,441,558	+				+0.2
1,441,558	+				+0.1
1,441,558	+				+0.3
1,441,558	+				-0.9
1,441,558	+				+0.6
1,441,559	-				-0.5
1,441,562	+				+0.2
1,441,563	-				+0.3
1,441,563	-				-0.5
1,441,656	-				+0.7
1,441,841	+				-0.0
1,441,841	+				-0.2
1,441,841	+				+0.2
1,441,841	+				+1.0
1,441,842	-				+0.4
1,441,842	-				+0.4
1,441,842	-				-0.2
1,441,842	-				-0.6
1,441,844	+				-0.1
1,441,915	+				-0.3
1,441,934	+				+1.2
1,441,935	-				-0.2
1,441,942	+				-0.2
1,441,942	+				-1.0
1,441,942	+				-0.2
1,441,943	-				+0.3
1,441,960	-				+0.2
1,442,047	+				-0.4
1,442,078	-				-0.7
1,442,078	-				+0.7
1,442,153	+		ABZR86_RS06495	0.24	-0.8
1,442,205	+		ABZR86_RS06495	0.36	+0.1
1,442,344	+		ABZR86_RS06495	0.68	+1.0
1,442,344	+		ABZR86_RS06495	0.68	+0.7
1,442,345	-		ABZR86_RS06495	0.68	+0.4
1,442,347	+		ABZR86_RS06495	0.69	-0.0
1,442,347	+		ABZR86_RS06495	0.69	-0.9
1,442,347	+		ABZR86_RS06495	0.69	-0.1
1,442,347	+		ABZR86_RS06495	0.69	+1.9
1,442,347	+		ABZR86_RS06495	0.69	-0.6
1,442,380	+		ABZR86_RS06495	0.76	+0.2
1,442,381	-		ABZR86_RS06495	0.76	+0.1
1,442,398	+		ABZR86_RS06495	0.80	-0.4
1,442,399	-		ABZR86_RS06495	0.81	-0.7
1,442,399	-		ABZR86_RS06495	0.81	+0.1
1,442,399	-		ABZR86_RS06495	0.81	-0.2
1,442,421	+		ABZR86_RS06495	0.86	+0.3
1,442,421	+		ABZR86_RS06495	0.86	-0.7
1,442,446	+				+0.5
1,442,446	+				-1.1
1,442,447	-				+0.7
1,442,631	-				-0.6
1,442,631	-				+0.8