Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS03600

Experiment: a-Cyclodextrin (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS03595 and ABZR86_RS03600 are separated by 100 nucleotidesABZR86_RS03600 and ABZR86_RS03605 are separated by 152 nucleotides ABZR86_RS03595: ABZR86_RS03595 - FAD-containing oxidoreductase, at 768,256 to 769,626 _RS03595 ABZR86_RS03600: ABZR86_RS03600 - TMEM175 family protein, at 769,727 to 770,368 _RS03600 ABZR86_RS03605: ABZR86_RS03605 - autotransporter domain-containing protein, at 770,521 to 773,406 _RS03605 Position (kb) 769 770 771Strain fitness (log2 ratio) -2 -1 0 1 2at 768.793 kb on + strand, within ABZR86_RS03595at 768.793 kb on + strand, within ABZR86_RS03595at 768.793 kb on + strand, within ABZR86_RS03595at 768.793 kb on + strand, within ABZR86_RS03595at 768.793 kb on + strand, within ABZR86_RS03595at 768.794 kb on - strand, within ABZR86_RS03595at 768.794 kb on - strand, within ABZR86_RS03595at 768.794 kb on - strand, within ABZR86_RS03595at 768.794 kb on - strand, within ABZR86_RS03595at 768.794 kb on - strand, within ABZR86_RS03595at 768.794 kb on - strand, within ABZR86_RS03595at 768.794 kb on - strand, within ABZR86_RS03595at 768.794 kb on - strand, within ABZR86_RS03595at 768.795 kb on + strand, within ABZR86_RS03595at 768.795 kb on + strand, within ABZR86_RS03595at 768.796 kb on - strand, within ABZR86_RS03595at 769.053 kb on - strand, within ABZR86_RS03595at 769.068 kb on + strand, within ABZR86_RS03595at 769.161 kb on + strand, within ABZR86_RS03595at 769.161 kb on + strand, within ABZR86_RS03595at 769.200 kb on + strand, within ABZR86_RS03595at 769.200 kb on + strand, within ABZR86_RS03595at 769.200 kb on + strand, within ABZR86_RS03595at 769.207 kb on - strand, within ABZR86_RS03595at 769.213 kb on + strand, within ABZR86_RS03595at 769.213 kb on + strand, within ABZR86_RS03595at 769.289 kb on - strand, within ABZR86_RS03595at 769.524 kb on + strandat 769.524 kb on + strandat 769.525 kb on - strandat 769.531 kb on + strandat 769.546 kb on + strandat 769.547 kb on - strandat 769.625 kb on - strandat 769.684 kb on + strandat 769.685 kb on - strandat 769.685 kb on - strandat 769.715 kb on + strandat 769.716 kb on - strandat 769.716 kb on - strandat 769.716 kb on - strandat 769.965 kb on + strand, within ABZR86_RS03600at 769.965 kb on + strand, within ABZR86_RS03600at 769.966 kb on - strand, within ABZR86_RS03600at 769.966 kb on - strand, within ABZR86_RS03600at 769.966 kb on - strand, within ABZR86_RS03600at 769.990 kb on - strand, within ABZR86_RS03600at 770.104 kb on + strand, within ABZR86_RS03600at 770.182 kb on - strand, within ABZR86_RS03600at 770.182 kb on - strand, within ABZR86_RS03600at 770.450 kb on - strandat 770.455 kb on - strandat 770.455 kb on - strandat 770.517 kb on - strandat 770.522 kb on + strandat 770.523 kb on - strandat 770.588 kb on + strandat 770.589 kb on - strandat 770.589 kb on - strandat 770.589 kb on - strandat 770.589 kb on - strandat 770.841 kb on + strand, within ABZR86_RS03605at 770.841 kb on + strand, within ABZR86_RS03605at 770.841 kb on + strand, within ABZR86_RS03605at 770.842 kb on - strand, within ABZR86_RS03605at 770.842 kb on - strand, within ABZR86_RS03605at 770.842 kb on - strand, within ABZR86_RS03605at 770.842 kb on - strand, within ABZR86_RS03605at 770.842 kb on - strand, within ABZR86_RS03605at 770.918 kb on + strand, within ABZR86_RS03605at 770.919 kb on - strand, within ABZR86_RS03605at 770.919 kb on - strand, within ABZR86_RS03605at 771.012 kb on + strand, within ABZR86_RS03605at 771.012 kb on + strand, within ABZR86_RS03605at 771.012 kb on + strand, within ABZR86_RS03605at 771.012 kb on + strand, within ABZR86_RS03605at 771.013 kb on - strand, within ABZR86_RS03605at 771.013 kb on - strand, within ABZR86_RS03605at 771.013 kb on - strand, within ABZR86_RS03605at 771.013 kb on - strand, within ABZR86_RS03605at 771.014 kb on + strand, within ABZR86_RS03605at 771.014 kb on + strand, within ABZR86_RS03605at 771.014 kb on + strand, within ABZR86_RS03605at 771.014 kb on + strand, within ABZR86_RS03605at 771.015 kb on - strand, within ABZR86_RS03605at 771.015 kb on - strand, within ABZR86_RS03605at 771.015 kb on - strand, within ABZR86_RS03605at 771.015 kb on - strand, within ABZR86_RS03605at 771.089 kb on + strand, within ABZR86_RS03605at 771.089 kb on + strand, within ABZR86_RS03605at 771.110 kb on + strand, within ABZR86_RS03605at 771.111 kb on - strand, within ABZR86_RS03605at 771.111 kb on - strand, within ABZR86_RS03605at 771.111 kb on - strand, within ABZR86_RS03605at 771.137 kb on + strand, within ABZR86_RS03605at 771.186 kb on + strand, within ABZR86_RS03605

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Per-strain Table

Position Strand Gene LocusTag Fraction a-Cyclodextrin (C)
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768,793 + ABZR86_RS03595 0.39 +0.6
768,793 + ABZR86_RS03595 0.39 +0.8
768,793 + ABZR86_RS03595 0.39 -0.3
768,793 + ABZR86_RS03595 0.39 +0.9
768,793 + ABZR86_RS03595 0.39 -0.2
768,794 - ABZR86_RS03595 0.39 -0.3
768,794 - ABZR86_RS03595 0.39 +0.7
768,794 - ABZR86_RS03595 0.39 -0.9
768,794 - ABZR86_RS03595 0.39 -0.6
768,794 - ABZR86_RS03595 0.39 -0.1
768,794 - ABZR86_RS03595 0.39 +0.5
768,794 - ABZR86_RS03595 0.39 +0.2
768,794 - ABZR86_RS03595 0.39 -0.7
768,795 + ABZR86_RS03595 0.39 +0.1
768,795 + ABZR86_RS03595 0.39 +0.0
768,796 - ABZR86_RS03595 0.39 +1.8
769,053 - ABZR86_RS03595 0.58 +0.0
769,068 + ABZR86_RS03595 0.59 -0.4
769,161 + ABZR86_RS03595 0.66 +0.2
769,161 + ABZR86_RS03595 0.66 -0.4
769,200 + ABZR86_RS03595 0.69 -0.5
769,200 + ABZR86_RS03595 0.69 -0.8
769,200 + ABZR86_RS03595 0.69 +1.3
769,207 - ABZR86_RS03595 0.69 +0.7
769,213 + ABZR86_RS03595 0.70 -1.2
769,213 + ABZR86_RS03595 0.70 +0.4
769,289 - ABZR86_RS03595 0.75 +0.8
769,524 + +0.4
769,524 + +0.3
769,525 - +0.3
769,531 + +0.5
769,546 + -0.3
769,547 - +0.2
769,625 - -1.8
769,684 + +0.4
769,685 - -0.1
769,685 - +0.4
769,715 + +0.5
769,716 - -0.3
769,716 - +1.0
769,716 - +0.3
769,965 + ABZR86_RS03600 0.37 +0.7
769,965 + ABZR86_RS03600 0.37 -0.3
769,966 - ABZR86_RS03600 0.37 +0.9
769,966 - ABZR86_RS03600 0.37 -0.4
769,966 - ABZR86_RS03600 0.37 +1.2
769,990 - ABZR86_RS03600 0.41 +0.1
770,104 + ABZR86_RS03600 0.59 +1.2
770,182 - ABZR86_RS03600 0.71 -0.8
770,182 - ABZR86_RS03600 0.71 +1.2
770,450 - +0.7
770,455 - +0.6
770,455 - +0.3
770,517 - +1.8
770,522 + +0.2
770,523 - -0.0
770,588 + -0.0
770,589 - +0.6
770,589 - +1.6
770,589 - +0.7
770,589 - -0.7
770,841 + ABZR86_RS03605 0.11 +0.2
770,841 + ABZR86_RS03605 0.11 +0.6
770,841 + ABZR86_RS03605 0.11 +0.1
770,842 - ABZR86_RS03605 0.11 -0.2
770,842 - ABZR86_RS03605 0.11 +0.2
770,842 - ABZR86_RS03605 0.11 +0.5
770,842 - ABZR86_RS03605 0.11 +0.3
770,842 - ABZR86_RS03605 0.11 +0.7
770,918 + ABZR86_RS03605 0.14 -0.4
770,919 - ABZR86_RS03605 0.14 +0.2
770,919 - ABZR86_RS03605 0.14 -1.2
771,012 + ABZR86_RS03605 0.17 +0.8
771,012 + ABZR86_RS03605 0.17 +0.1
771,012 + ABZR86_RS03605 0.17 -0.3
771,012 + ABZR86_RS03605 0.17 -0.3
771,013 - ABZR86_RS03605 0.17 +2.1
771,013 - ABZR86_RS03605 0.17 +0.2
771,013 - ABZR86_RS03605 0.17 +1.1
771,013 - ABZR86_RS03605 0.17 +0.1
771,014 + ABZR86_RS03605 0.17 -0.2
771,014 + ABZR86_RS03605 0.17 +2.3
771,014 + ABZR86_RS03605 0.17 +0.6
771,014 + ABZR86_RS03605 0.17 +0.9
771,015 - ABZR86_RS03605 0.17 -0.6
771,015 - ABZR86_RS03605 0.17 -0.0
771,015 - ABZR86_RS03605 0.17 -0.5
771,015 - ABZR86_RS03605 0.17 +0.4
771,089 + ABZR86_RS03605 0.20 +1.5
771,089 + ABZR86_RS03605 0.20 +0.8
771,110 + ABZR86_RS03605 0.20 -0.4
771,111 - ABZR86_RS03605 0.20 -0.6
771,111 - ABZR86_RS03605 0.20 +1.4
771,111 - ABZR86_RS03605 0.20 +0.2
771,137 + ABZR86_RS03605 0.21 +1.4
771,186 + ABZR86_RS03605 0.23 -0.4

Or see this region's nucleotide sequence