Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03086

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
3,234,635	+		CCNA_03085	0.10	-0.2
3,234,644	-		CCNA_03085	0.11	-2.1
3,234,644	-		CCNA_03085	0.11	+0.6
3,234,644	-		CCNA_03085	0.11	+0.6
3,234,644	-		CCNA_03085	0.11	-0.8
3,234,673	+		CCNA_03085	0.14	+2.4
3,234,687	-		CCNA_03085	0.15	-0.3
3,234,700	-		CCNA_03085	0.17	-0.3
3,234,768	-		CCNA_03085	0.24	+0.0
3,234,778	-		CCNA_03085	0.25	+0.4
3,234,805	+		CCNA_03085	0.27	+0.2
3,234,805	+		CCNA_03085	0.27	-0.1
3,234,805	+		CCNA_03085	0.27	-0.1
3,234,807	+		CCNA_03085	0.28	+1.7
3,234,807	+		CCNA_03085	0.28	-0.3
3,234,807	+		CCNA_03085	0.28	-0.0
3,234,813	-		CCNA_03085	0.28	+1.7
3,234,813	-		CCNA_03085	0.28	+0.9
3,234,813	-		CCNA_03085	0.28	-0.9
3,234,813	-		CCNA_03085	0.28	+1.3
3,234,815	-		CCNA_03085	0.28	-1.7
3,234,815	-		CCNA_03085	0.28	+0.6
3,234,835	+		CCNA_03085	0.30	-0.9
3,234,867	+		CCNA_03085	0.34	-1.0
3,234,891	+		CCNA_03085	0.36	+0.0
3,234,901	+		CCNA_03085	0.37	-1.1
3,234,920	-		CCNA_03085	0.39	-0.4
3,234,939	-		CCNA_03085	0.41	-0.8
3,234,941	+		CCNA_03085	0.41	-2.1
3,234,992	+		CCNA_03085	0.47	-0.9
3,235,008	-		CCNA_03085	0.48	-0.9
3,235,031	+		CCNA_03085	0.51	+1.9
3,235,031	+		CCNA_03085	0.51	-3.0
3,235,039	-		CCNA_03085	0.51	-0.2
3,235,039	-		CCNA_03085	0.51	+1.3
3,235,039	-		CCNA_03085	0.51	-0.8
3,235,138	+		CCNA_03085	0.61	-0.8
3,235,146	-		CCNA_03085	0.62	+0.0
3,235,154	-		CCNA_03085	0.63	-0.1
3,235,157	+		CCNA_03085	0.63	-0.9
3,235,157	+		CCNA_03085	0.63	+1.3
3,235,165	+		CCNA_03085	0.64	+0.4
3,235,165	-		CCNA_03085	0.64	+2.9
3,235,165	-		CCNA_03085	0.64	+0.9
3,235,171	+		CCNA_03085	0.65	+0.1
3,235,171	+		CCNA_03085	0.65	+1.0
3,235,171	+		CCNA_03085	0.65	+2.7
3,235,171	+		CCNA_03085	0.65	+0.1
3,235,171	+		CCNA_03085	0.65	+0.5
3,235,179	-		CCNA_03085	0.66	-0.2
3,235,179	-		CCNA_03085	0.66	-1.0
3,235,179	-		CCNA_03085	0.66	-1.4
3,235,191	+		CCNA_03085	0.67	+0.3
3,235,191	+		CCNA_03085	0.67	+0.2
3,235,199	-		CCNA_03085	0.68	-0.0
3,235,199	-		CCNA_03085	0.68	-0.6
3,235,199	-		CCNA_03085	0.68	-2.8
3,235,222	+		CCNA_03085	0.70	-0.4
3,235,231	-		CCNA_03085	0.71	+0.1
3,235,236	+		CCNA_03085	0.71	-1.8
3,235,261	+		CCNA_03085	0.74	+0.2
3,235,261	+		CCNA_03085	0.74	+2.3
3,235,264	-		CCNA_03085	0.74	+2.9
3,235,269	-		CCNA_03085	0.75	+1.0
3,235,311	-		CCNA_03085	0.79	-0.2
3,235,321	-		CCNA_03085	0.80	+0.5
3,235,345	+		CCNA_03085	0.83	-0.2
3,235,345	+		CCNA_03085	0.83	-0.2
3,235,353	-		CCNA_03085	0.83	-0.0
3,235,353	-		CCNA_03085	0.83	+1.2
3,235,363	+		CCNA_03085	0.84	-0.1
3,235,371	-		CCNA_03085	0.85	+0.1
3,235,371	-		CCNA_03085	0.85	-0.0
3,235,371	-		CCNA_03085	0.85	+0.2
3,235,374	+		CCNA_03085	0.86	+1.3
3,235,374	+		CCNA_03085	0.86	-0.6
3,235,382	-		CCNA_03085	0.86	+0.9
3,235,386	+		CCNA_03085	0.87	+1.5
3,235,399	+		CCNA_03085	0.88	-0.1
3,235,417	+				+0.4
3,235,417	+				-1.7
3,235,425	-				-0.4
3,235,425	-				-1.1
3,235,477	+				+0.1
3,235,495	-				-1.0
3,235,495	-				-0.2
3,235,500	-				-0.0
3,235,596	-				+0.9
3,235,637	+		CCNA_03086	0.13	+0.3
3,235,649	+		CCNA_03086	0.16	-0.7
3,235,649	+		CCNA_03086	0.16	+1.9
3,235,654	+		CCNA_03086	0.17	+1.9
3,235,656	-		CCNA_03086	0.17	-0.4
3,235,657	-		CCNA_03086	0.18	-1.1
3,235,669	+		CCNA_03086	0.20	-1.1
3,235,669	+		CCNA_03086	0.20	-0.8
3,235,669	+		CCNA_03086	0.20	-0.7
3,235,677	-		CCNA_03086	0.22	-1.4
3,235,683	+		CCNA_03086	0.23	+0.4
3,235,691	-		CCNA_03086	0.25	-1.7
3,235,706	+		CCNA_03086	0.29	+0.0
3,235,726	+		CCNA_03086	0.33	+0.1
3,235,819	+		CCNA_03086	0.54	+1.4
3,235,865	+		CCNA_03086	0.64	-0.2
3,235,865	+		CCNA_03086	0.64	-1.4
3,235,865	+		CCNA_03086	0.64	-0.2
3,235,865	+		CCNA_03086	0.64	-0.7
3,235,876	+		CCNA_03086	0.67	+0.3
3,235,876	+		CCNA_03086	0.67	-0.6
3,235,921	+		CCNA_03086	0.77	-0.9
3,235,978	-		CCNA_03086	0.89	-0.9
3,236,055	-				-1.2
3,236,092	+				-1.4
3,236,100	-				+0.9
3,236,100	-				+0.3
3,236,121	-				-1.2
3,236,190	+				-0.6
3,236,320	+				+0.2
3,236,322	+				+0.7
3,236,341	+				-0.2
3,236,352	+				-0.6
3,236,360	+				+0.9
3,236,361	+				+1.0
3,236,362	+				-1.0
3,236,398	-				+0.1
3,236,407	-				+1.1
3,236,491	+		CCNA_03087	0.24	+1.6
3,236,499	-		CCNA_03087	0.26	+0.3
3,236,509	-				+3.9
3,236,509	-		CCNA_03087	0.27	-0.9
3,236,523	-		CCNA_03087	0.30	+1.0
3,236,544	+		CCNA_03087	0.34	+2.1
3,236,562	-		CCNA_03087	0.37	+0.0
3,236,588	+		CCNA_03087	0.42	+0.6
3,236,596	-		CCNA_03087	0.43	+1.0
3,236,596	-		CCNA_03087	0.43	-1.8
3,236,601	-		CCNA_03087	0.44	-0.1
3,236,637	-		CCNA_03087	0.50	+0.0
3,236,637	-		CCNA_03087	0.50	-0.8
3,236,675	+		CCNA_03087	0.57	+1.0
3,236,677	-		CCNA_03087	0.57	-0.4
3,236,677	-		CCNA_03087	0.57	+1.1
3,236,699	-		CCNA_03087	0.61	-0.4
3,236,700	+		CCNA_03087	0.61	+0.3
3,236,709	-		CCNA_03087	0.63	-1.7
3,236,709	-		CCNA_03087	0.63	+1.1
3,236,722	+		CCNA_03087	0.65	+0.3
3,236,736	+		CCNA_03087	0.68	+0.6
3,236,741	+		CCNA_03087	0.69	-0.8
3,236,741	+		CCNA_03087	0.69	+0.4
3,236,741	+		CCNA_03087	0.69	-0.9
3,236,744	-		CCNA_03087	0.69	-1.2
3,236,749	+		CCNA_03087	0.70	+0.6
3,236,749	-		CCNA_03087	0.70	-1.8
3,236,757	-		CCNA_03087	0.72	-1.3
3,236,782	+		CCNA_03087	0.76	+0.4
3,236,783	-		CCNA_03087	0.76	+1.9
3,236,783	-		CCNA_03087	0.76	-0.7
3,236,788	-		CCNA_03087	0.77	-0.3
3,236,805	-		CCNA_03087	0.80	+1.7
3,236,815	-		CCNA_03087	0.82	-1.2
3,236,824	+		CCNA_03087	0.84	-2.3
3,236,824	+		CCNA_03087	0.84	+0.6
3,236,824	+		CCNA_03087	0.84	+0.4
3,236,824	+		CCNA_03087	0.84	-0.9
3,236,832	-		CCNA_03087	0.85	-0.0
3,236,832	-		CCNA_03087	0.85	+2.1
3,236,868	+				+1.8
3,236,897	-				+0.3
3,236,928	+				-0.4
3,236,953	+				-0.7
3,237,007	-				+1.0
3,237,015	-				-0.6