Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01083

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
1,185,914	-		CCNA_01082	0.24	+0.1
1,185,920	-		CCNA_01082	0.25	-1.4
1,185,937	-		CCNA_01082	0.26	+1.0
1,185,937	-		CCNA_01082	0.26	+2.3
1,185,962	+		CCNA_01082	0.29	+0.7
1,185,962	+		CCNA_01082	0.29	-1.8
1,185,962	+		CCNA_01082	0.29	-1.1
1,185,968	+		CCNA_01082	0.29	-0.2
1,185,970	-		CCNA_01082	0.30	-1.2
1,185,970	-		CCNA_01082	0.30	-1.5
1,185,970	-		CCNA_01082	0.30	+0.1
1,185,970	-		CCNA_01082	0.30	-0.4
1,185,985	-		CCNA_01082	0.31	+2.0
1,185,985	-		CCNA_01082	0.31	+0.4
1,186,012	+		CCNA_01082	0.34	+1.0
1,186,012	+		CCNA_01082	0.34	-0.7
1,186,020	-		CCNA_01082	0.34	-0.5
1,186,020	-		CCNA_01082	0.34	-1.3
1,186,028	+		CCNA_01082	0.35	+2.1
1,186,034	+		CCNA_01082	0.36	-0.4
1,186,034	+		CCNA_01082	0.36	-1.3
1,186,034	+		CCNA_01082	0.36	+1.5
1,186,036	-		CCNA_01082	0.36	+1.8
1,186,042	-		CCNA_01082	0.37	+1.7
1,186,042	-		CCNA_01082	0.37	-0.4
1,186,094	+		CCNA_01082	0.42	-0.9
1,186,105	-		CCNA_01082	0.43	-1.5
1,186,119	-		CCNA_01082	0.44	+1.0
1,186,140	+		CCNA_01082	0.46	-0.7
1,186,201	+		CCNA_01082	0.52	+0.2
1,186,270	-		CCNA_01082	0.59	-0.8
1,186,278	-		CCNA_01082	0.59	-1.3
1,186,303	+		CCNA_01082	0.62	-0.4
1,186,356	+		CCNA_01082	0.67	-2.0
1,186,364	-		CCNA_01082	0.68	-0.9
1,186,365	+		CCNA_01082	0.68	+1.3
1,186,379	+		CCNA_01082	0.69	-1.3
1,186,440	+		CCNA_01082	0.75	-0.5
1,186,457	+		CCNA_01082	0.77	+1.3
1,186,457	+		CCNA_01082	0.77	-1.6
1,186,457	+		CCNA_01082	0.77	-0.0
1,186,457	+		CCNA_01082	0.77	+1.0
1,186,457	+		CCNA_01082	0.77	+0.2
1,186,508	+		CCNA_01082	0.82	+0.9
1,186,518	+		CCNA_01082	0.83	-1.3
1,186,546	+		CCNA_01082	0.85	+0.7
1,186,554	-		CCNA_01082	0.86	-0.1
1,186,568	+		CCNA_01082	0.87	-0.5
1,186,569	+		CCNA_01082	0.87	-0.2
1,186,576	-		CCNA_01082	0.88	-0.2
1,186,587	-		CCNA_01082	0.89	-0.1
1,186,607	+				+0.3
1,186,629	+				-1.0
1,186,700	+				-0.3
1,186,700	+				-1.6
1,186,700	+				+1.7
1,186,708	-				-1.0
1,186,708	-				-1.2
1,186,708	-				+0.1
1,186,708	-				-0.8
1,186,708	-				-0.3
1,186,708	-				-0.1
1,186,708	-				+0.6
1,186,718	-				-0.5
1,186,720	-				+1.0
1,186,729	+				-0.1
1,186,732	-				-1.5
1,186,732	-				-1.3
1,186,736	+				-1.9
1,186,743	-				+0.1
1,186,744	-				+0.5
1,186,770	+				-0.9
1,186,775	+				+0.0
1,186,780	+				+0.3
1,186,792	+				+0.0
1,186,792	+				-2.3
1,186,809	-				-0.7
1,186,879	+				+0.6
1,186,965	-				-0.6
1,186,991	-				-0.7
1,187,017	+				-0.0
1,187,020	-				+1.1
1,187,075	-				-0.7
1,187,110	-		CCNA_01083	0.11	+1.3
1,187,198	+		CCNA_01083	0.16	-1.0
1,187,206	-		CCNA_01083	0.16	-0.7
1,187,230	+		CCNA_01083	0.17	-0.6
1,187,236	+		CCNA_01083	0.18	-0.8
1,187,236	+		CCNA_01083	0.18	+0.7
1,187,236	+		CCNA_01083	0.18	-2.1
1,187,236	+		CCNA_01083	0.18	+0.5
1,187,236	+		CCNA_01083	0.18	-1.2
1,187,238	-		CCNA_01083	0.18	-0.9
1,187,238	-		CCNA_01083	0.18	+0.5
1,187,238	-		CCNA_01083	0.18	-0.8
1,187,244	-		CCNA_01083	0.18	-0.4
1,187,244	-		CCNA_01083	0.18	+1.7
1,187,244	-		CCNA_01083	0.18	-1.3
1,187,244	-		CCNA_01083	0.18	-1.7
1,187,312	+		CCNA_01083	0.21	-0.6
1,187,505	+		CCNA_01083	0.31	+0.3
1,187,518	-		CCNA_01083	0.32	-0.7
1,187,545	+		CCNA_01083	0.33	-0.4
1,187,564	+		CCNA_01083	0.34	-0.3
1,187,564	+		CCNA_01083	0.34	-0.2
1,187,564	+		CCNA_01083	0.34	-0.7
1,187,626	+		CCNA_01083	0.37	-1.1
1,187,638	-		CCNA_01083	0.38	+0.1
1,187,662	+		CCNA_01083	0.39	+0.1
1,187,664	-		CCNA_01083	0.39	+0.7
1,187,672	+		CCNA_01083	0.40	-0.0
1,187,785	+		CCNA_01083	0.45	-1.2
1,187,797	+		CCNA_01083	0.46	+0.7
1,187,929	+		CCNA_01083	0.52	-2.7
1,187,966	+		CCNA_01083	0.54	-1.2
1,187,966	+		CCNA_01083	0.54	-0.9
1,187,966	+		CCNA_01083	0.54	-0.2
1,187,966	+		CCNA_01083	0.54	-1.2
1,187,974	-		CCNA_01083	0.55	+0.1
1,187,974	-		CCNA_01083	0.55	+0.6
1,187,974	-		CCNA_01083	0.55	+1.0
1,187,974	-		CCNA_01083	0.55	-1.5
1,187,974	-		CCNA_01083	0.55	-0.9
1,188,010	+		CCNA_01083	0.56	+0.1
1,188,010	+		CCNA_01083	0.56	-0.7
1,188,016	-		CCNA_01083	0.57	-1.0
1,188,021	+		CCNA_01083	0.57	-1.6
1,188,021	+		CCNA_01083	0.57	+1.3
1,188,021	+		CCNA_01083	0.57	-0.5
1,188,021	+		CCNA_01083	0.57	-2.2
1,188,021	+		CCNA_01083	0.57	+0.1
1,188,021	+		CCNA_01083	0.57	+0.3
1,188,022	+		CCNA_01083	0.57	-2.5
1,188,022	+		CCNA_01083	0.57	+3.2
1,188,029	-		CCNA_01083	0.57	+0.3
1,188,029	-		CCNA_01083	0.57	-2.0
1,188,029	-		CCNA_01083	0.57	-0.4
1,188,029	-		CCNA_01083	0.57	-1.2
1,188,029	-		CCNA_01083	0.57	-0.3
1,188,032	+		CCNA_01083	0.58	-1.1
1,188,032	+		CCNA_01083	0.58	+2.3
1,188,032	+		CCNA_01083	0.58	-0.1
1,188,032	+		CCNA_01083	0.58	-0.6
1,188,032	+		CCNA_01083	0.58	+0.2
1,188,032	+		CCNA_01083	0.58	-0.8
1,188,040	-		CCNA_01083	0.58	-0.6
1,188,040	-		CCNA_01083	0.58	+0.3
1,188,040	-		CCNA_01083	0.58	-2.7
1,188,042	+				+2.3
1,188,061	+		CCNA_01083	0.59	+0.6
1,188,095	+		CCNA_01083	0.61	-2.0
1,188,103	-		CCNA_01083	0.61	-1.6
1,188,113	+		CCNA_01083	0.62	+0.0
1,188,137	-		CCNA_01083	0.63	+0.5
1,188,151	-		CCNA_01083	0.64	-2.4
1,188,229	-		CCNA_01083	0.67	-0.6
1,188,243	+		CCNA_01083	0.68	-1.6
1,188,270	-		CCNA_01083	0.70	-0.6
1,188,275	+		CCNA_01083	0.70	+0.4
1,188,302	+		CCNA_01083	0.71	-0.2
1,188,339	+		CCNA_01083	0.73	-2.0
1,188,400	+		CCNA_01083	0.76	-2.8
1,188,457	+		CCNA_01083	0.79	-0.3
1,188,458	-		CCNA_01083	0.79	-0.9
1,188,462	+		CCNA_01083	0.79	-1.5
1,188,462	+		CCNA_01083	0.79	-2.6
1,188,480	+		CCNA_01083	0.80	-0.5
1,188,516	+		CCNA_01083	0.82	-1.7
1,188,530	+		CCNA_01083	0.83	+0.3
1,188,531	+		CCNA_01083	0.83	-0.1
1,188,552	+		CCNA_01083	0.84	-1.5
1,188,653	+		CCNA_01083	0.89	-0.3
1,188,668	+		CCNA_01083	0.90	-2.7
1,188,669	+		CCNA_01083	0.90	-0.8
1,188,700	+				+0.8
1,188,723	+				-0.2
1,188,723	+				-1.9
1,188,723	+				-1.8
1,188,723	+				-0.1
1,188,723	+				+0.5
1,188,723	+				+0.8
1,188,754	+				+0.0
1,188,754	+				+1.5
1,188,761	+				+0.3
1,188,787	+				-0.2
1,188,892	+				-0.6
1,188,902	+				-0.8
1,188,912	+				+1.8
1,188,912	+				-1.1
1,188,922	+				+0.4
1,188,922	+				-0.5
1,188,930	-				+0.4
1,188,930	-				-0.4
1,188,952	+				-1.7
1,188,981	-				+0.8
1,189,009	-		CCNA_01084	0.11	+0.3
1,189,059	-		CCNA_01084	0.15	-1.4
1,189,095	+		CCNA_01084	0.18	-1.3
1,189,324	+		CCNA_01084	0.36	-0.5
1,189,332	-		CCNA_01084	0.37	+0.5
1,189,332	-		CCNA_01084	0.37	-0.3
1,189,495	-		CCNA_01084	0.50	-2.0
1,189,527	-		CCNA_01084	0.53	+0.9
1,189,534	+		CCNA_01084	0.53	-1.2
1,189,534	+		CCNA_01084	0.53	+0.0
1,189,534	+		CCNA_01084	0.53	-1.6
1,189,534	+		CCNA_01084	0.53	+1.5
1,189,542	-		CCNA_01084	0.54	-0.6
1,189,542	-		CCNA_01084	0.54	-1.3
1,189,542	-		CCNA_01084	0.54	-1.6
1,189,596	-		CCNA_01084	0.58	-1.8
1,189,692	+		CCNA_01084	0.66	-1.4
1,189,736	-		CCNA_01084	0.70	+0.1
1,189,807	-		CCNA_01084	0.76	-0.5
1,189,813	+		CCNA_01084	0.76	+0.4
1,189,816	-		CCNA_01084	0.76	-1.6
1,189,821	-		CCNA_01084	0.77	-1.0
1,189,862	-		CCNA_01084	0.80	-0.1
1,189,863	+		CCNA_01084	0.80	-0.6
1,189,863	+		CCNA_01084	0.80	-0.2
1,189,871	-		CCNA_01084	0.81	-1.8