Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_28190 and AO353_28195 are separated by 339 nucleotides AO353_28195 and AO353_28200 are separated by 100 nucleotides AO353_28200 and AO353_28205 are separated by 63 nucleotides AO353_28205 and AO353_28210 are separated by 45 nucleotides
AO353_28190: AO353_28190 - AraC family transcriptional regulator, at 6,145,786 to 6,146,769
_28190
AO353_28195: AO353_28195 - panthothenate synthetase, at 6,147,109 to 6,147,414
_28195
AO353_28200: AO353_28200 - ribosomal protein S3AE, at 6,147,515 to 6,147,916
_28200
AO353_28205: AO353_28205 - AsnC family transcriptional regulator, at 6,147,980 to 6,148,468
_28205
AO353_28210: AO353_28210 - 2-haloalkanoic acid dehalogenase, at 6,148,514 to 6,149,170
_28210
Position (kb)
6147
6148 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 6146.626 kb on + strand, within AO353_28190 at 6146.626 kb on + strand, within AO353_28190 at 6146.626 kb on + strand, within AO353_28190 at 6146.649 kb on + strand, within AO353_28190 at 6146.650 kb on - strand, within AO353_28190 at 6146.809 kb on + strand at 6146.810 kb on - strand at 6146.810 kb on - strand at 6146.868 kb on + strand at 6146.868 kb on + strand at 6146.868 kb on + strand at 6146.868 kb on + strand at 6146.868 kb on + strand at 6146.870 kb on + strand at 6146.870 kb on + strand at 6146.871 kb on + strand at 6146.871 kb on - strand at 6146.871 kb on - strand at 6146.871 kb on - strand at 6146.895 kb on + strand at 6146.896 kb on - strand at 6147.002 kb on + strand at 6147.003 kb on - strand at 6147.035 kb on + strand at 6147.036 kb on - strand at 6147.087 kb on + strand at 6147.087 kb on + strand at 6147.119 kb on + strand at 6147.120 kb on - strand at 6147.226 kb on + strand, within AO353_28195 at 6147.226 kb on + strand, within AO353_28195 at 6147.226 kb on + strand, within AO353_28195 at 6147.227 kb on - strand, within AO353_28195 at 6147.227 kb on - strand, within AO353_28195 at 6147.227 kb on - strand, within AO353_28195 at 6147.227 kb on - strand, within AO353_28195 at 6147.232 kb on - strand, within AO353_28195 at 6147.275 kb on + strand, within AO353_28195 at 6147.275 kb on + strand, within AO353_28195 at 6147.275 kb on + strand, within AO353_28195 at 6147.275 kb on + strand, within AO353_28195 at 6147.276 kb on - strand, within AO353_28195 at 6147.276 kb on - strand, within AO353_28195 at 6147.276 kb on - strand, within AO353_28195 at 6147.276 kb on - strand, within AO353_28195 at 6147.276 kb on - strand, within AO353_28195 at 6147.276 kb on - strand, within AO353_28195 at 6147.276 kb on - strand, within AO353_28195 at 6147.501 kb on + strand at 6147.501 kb on + strand at 6147.501 kb on + strand at 6147.501 kb on + strand at 6147.501 kb on + strand at 6147.501 kb on + strand at 6147.501 kb on + strand at 6147.501 kb on + strand at 6147.501 kb on + strand at 6147.501 kb on + strand at 6147.501 kb on + strand at 6147.501 kb on + strand at 6147.502 kb on - strand at 6147.502 kb on - strand at 6147.502 kb on - strand at 6147.502 kb on - strand at 6147.502 kb on - strand at 6147.502 kb on - strand at 6147.502 kb on - strand at 6147.502 kb on - strand at 6147.502 kb on - strand at 6147.591 kb on + strand, within AO353_28200 at 6147.592 kb on - strand, within AO353_28200 at 6147.592 kb on - strand, within AO353_28200 at 6147.707 kb on + strand, within AO353_28200 at 6147.708 kb on - strand, within AO353_28200 at 6147.708 kb on - strand, within AO353_28200 at 6147.708 kb on - strand, within AO353_28200 at 6147.708 kb on - strand, within AO353_28200 at 6147.708 kb on - strand at 6147.717 kb on + strand, within AO353_28200 at 6147.718 kb on - strand, within AO353_28200 at 6147.778 kb on + strand, within AO353_28200 at 6147.876 kb on - strand at 6147.920 kb on - strand at 6147.920 kb on - strand at 6148.044 kb on + strand, within AO353_28205 at 6148.044 kb on + strand, within AO353_28205 at 6148.045 kb on - strand, within AO353_28205 at 6148.045 kb on - strand, within AO353_28205 at 6148.045 kb on - strand, within AO353_28205 at 6148.045 kb on - strand, within AO353_28205 at 6148.053 kb on + strand, within AO353_28205 at 6148.105 kb on - strand, within AO353_28205 at 6148.140 kb on + strand, within AO353_28205 at 6148.141 kb on - strand, within AO353_28205 at 6148.141 kb on - strand, within AO353_28205 at 6148.302 kb on + strand, within AO353_28205 at 6148.302 kb on + strand, within AO353_28205 at 6148.303 kb on - strand, within AO353_28205 at 6148.303 kb on - strand, within AO353_28205 at 6148.303 kb on - strand, within AO353_28205 at 6148.303 kb on - strand, within AO353_28205 at 6148.457 kb on + strand at 6148.458 kb on - strand at 6148.473 kb on + strand at 6148.473 kb on + strand at 6148.474 kb on - strand at 6148.474 kb on - strand at 6148.474 kb on - strand at 6148.474 kb on - strand at 6148.493 kb on + strand at 6148.572 kb on + strand at 6148.572 kb on + strand at 6148.704 kb on - strand, within AO353_28210 at 6148.827 kb on + strand, within AO353_28210 at 6148.828 kb on - strand, within AO353_28210 at 6148.842 kb on + strand, within AO353_28210 at 6148.843 kb on - strand, within AO353_28210 at 6148.843 kb on - strand, within AO353_28210
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 6,146,626 + AO353_28190 0.85 -1.5 6,146,626 + AO353_28190 0.85 +0.3 6,146,626 + AO353_28190 0.85 -0.5 6,146,649 + AO353_28190 0.88 +0.9 6,146,650 - AO353_28190 0.88 -0.1 6,146,809 + -1.1 6,146,810 - -0.2 6,146,810 - +1.5 6,146,868 + +0.8 6,146,868 + -2.0 6,146,868 + -0.7 6,146,868 + -0.8 6,146,868 + +1.0 6,146,870 + +0.4 6,146,870 + +0.3 6,146,871 + +0.5 6,146,871 - +1.7 6,146,871 - +0.1 6,146,871 - -0.3 6,146,895 + -0.2 6,146,896 - +0.4 6,147,002 + +0.2 6,147,003 - -0.2 6,147,035 + +0.0 6,147,036 - -0.8 6,147,087 + -0.6 6,147,087 + -1.7 6,147,119 + -0.7 6,147,120 - +0.4 6,147,226 + AO353_28195 0.38 +1.2 6,147,226 + AO353_28195 0.38 -0.1 6,147,226 + AO353_28195 0.38 -0.3 6,147,227 - AO353_28195 0.39 +0.5 6,147,227 - AO353_28195 0.39 -0.2 6,147,227 - AO353_28195 0.39 -0.5 6,147,227 - AO353_28195 0.39 -3.1 6,147,232 - AO353_28195 0.40 -1.1 6,147,275 + AO353_28195 0.54 +1.2 6,147,275 + AO353_28195 0.54 +0.5 6,147,275 + AO353_28195 0.54 -1.8 6,147,275 + AO353_28195 0.54 -1.5 6,147,276 - AO353_28195 0.55 -1.5 6,147,276 - AO353_28195 0.55 -2.1 6,147,276 - AO353_28195 0.55 +0.7 6,147,276 - AO353_28195 0.55 +0.1 6,147,276 - AO353_28195 0.55 +0.5 6,147,276 - AO353_28195 0.55 -0.1 6,147,276 - AO353_28195 0.55 +0.6 6,147,501 + +0.8 6,147,501 + +0.1 6,147,501 + +0.0 6,147,501 + +0.3 6,147,501 + +2.4 6,147,501 + -1.4 6,147,501 + -0.4 6,147,501 + -1.3 6,147,501 + -0.4 6,147,501 + -0.2 6,147,501 + -0.4 6,147,501 + +0.1 6,147,502 - -0.1 6,147,502 - +1.7 6,147,502 - +1.2 6,147,502 - +1.3 6,147,502 - -1.5 6,147,502 - +2.0 6,147,502 - +0.6 6,147,502 - +0.3 6,147,502 - -0.9 6,147,591 + AO353_28200 0.19 +0.4 6,147,592 - AO353_28200 0.19 +1.2 6,147,592 - AO353_28200 0.19 +0.7 6,147,707 + AO353_28200 0.48 +1.8 6,147,708 - AO353_28200 0.48 +1.2 6,147,708 - AO353_28200 0.48 +0.8 6,147,708 - AO353_28200 0.48 +0.1 6,147,708 - AO353_28200 0.48 -0.6 6,147,708 - +0.2 6,147,717 + AO353_28200 0.50 -0.5 6,147,718 - AO353_28200 0.50 -0.2 6,147,778 + AO353_28200 0.65 +0.7 6,147,876 - -0.4 6,147,920 - +0.0 6,147,920 - +0.2 6,148,044 + AO353_28205 0.13 -0.3 6,148,044 + AO353_28205 0.13 -2.1 6,148,045 - AO353_28205 0.13 +0.4 6,148,045 - AO353_28205 0.13 +0.4 6,148,045 - AO353_28205 0.13 -0.4 6,148,045 - AO353_28205 0.13 -2.2 6,148,053 + AO353_28205 0.15 +0.6 6,148,105 - AO353_28205 0.26 +1.3 6,148,140 + AO353_28205 0.33 +0.8 6,148,141 - AO353_28205 0.33 -0.3 6,148,141 - AO353_28205 0.33 +0.1 6,148,302 + AO353_28205 0.66 +0.2 6,148,302 + AO353_28205 0.66 +0.6 6,148,303 - AO353_28205 0.66 +0.3 6,148,303 - AO353_28205 0.66 -0.0 6,148,303 - AO353_28205 0.66 -1.1 6,148,303 - AO353_28205 0.66 -0.6 6,148,457 + -1.1 6,148,458 - -0.2 6,148,473 + -0.6 6,148,473 + +0.3 6,148,474 - -0.1 6,148,474 - -0.4 6,148,474 - -0.6 6,148,474 - +0.1 6,148,493 + -1.3 6,148,572 + +0.8 6,148,572 + -0.5 6,148,704 - AO353_28210 0.29 -1.0 6,148,827 + AO353_28210 0.48 -0.1 6,148,828 - AO353_28210 0.48 -1.6 6,148,842 + AO353_28210 0.50 -2.1 6,148,843 - AO353_28210 0.50 -0.6 6,148,843 - AO353_28210 0.50 -1.2
Or see this region's nucleotide sequence