Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_27345 and AO353_27350 are separated by 12 nucleotides AO353_27350 and AO353_27355 are separated by 12 nucleotides AO353_27355 and AO353_27360 are separated by 2 nucleotides
AO353_27345: AO353_27345 - capsid protein, at 5,974,871 to 5,975,899
_27345
AO353_27350: AO353_27350 - hypothetical protein, at 5,975,912 to 5,976,262
_27350
AO353_27355: AO353_27355 - hypothetical protein, at 5,976,275 to 5,977,507
_27355
AO353_27360: AO353_27360 - portal protein, at 5,977,510 to 5,979,120
_27360
Position (kb)
5976
5977
5978 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5975.662 kb on + strand, within AO353_27345 at 5975.663 kb on - strand, within AO353_27345 at 5975.663 kb on - strand, within AO353_27345 at 5975.664 kb on + strand, within AO353_27345 at 5975.664 kb on + strand, within AO353_27345 at 5975.664 kb on + strand, within AO353_27345 at 5975.664 kb on + strand, within AO353_27345 at 5975.665 kb on - strand, within AO353_27345 at 5975.665 kb on - strand, within AO353_27345 at 5975.665 kb on - strand, within AO353_27345 at 5975.665 kb on - strand, within AO353_27345 at 5975.665 kb on - strand, within AO353_27345 at 5975.676 kb on + strand, within AO353_27345 at 5975.676 kb on + strand, within AO353_27345 at 5975.676 kb on + strand, within AO353_27345 at 5975.677 kb on - strand, within AO353_27345 at 5975.677 kb on - strand, within AO353_27345 at 5975.677 kb on - strand, within AO353_27345 at 5975.677 kb on - strand, within AO353_27345 at 5975.677 kb on - strand, within AO353_27345 at 5975.691 kb on + strand, within AO353_27345 at 5975.692 kb on - strand, within AO353_27345 at 5975.692 kb on - strand, within AO353_27345 at 5975.893 kb on + strand at 5976.117 kb on + strand, within AO353_27350 at 5976.117 kb on + strand, within AO353_27350 at 5976.117 kb on + strand, within AO353_27350 at 5976.118 kb on - strand, within AO353_27350 at 5976.118 kb on - strand, within AO353_27350 at 5976.160 kb on + strand, within AO353_27350 at 5976.237 kb on + strand at 5976.237 kb on + strand at 5976.237 kb on + strand at 5976.237 kb on + strand at 5976.237 kb on + strand at 5976.237 kb on + strand at 5976.237 kb on + strand at 5976.237 kb on + strand at 5976.237 kb on + strand at 5976.238 kb on - strand at 5976.238 kb on - strand at 5976.238 kb on - strand at 5976.238 kb on - strand at 5976.238 kb on - strand at 5976.312 kb on - strand at 5976.421 kb on + strand, within AO353_27355 at 5976.421 kb on + strand, within AO353_27355 at 5976.422 kb on - strand, within AO353_27355 at 5976.788 kb on + strand, within AO353_27355 at 5976.788 kb on + strand, within AO353_27355 at 5976.788 kb on + strand at 5976.788 kb on + strand, within AO353_27355 at 5976.788 kb on + strand, within AO353_27355 at 5976.789 kb on - strand, within AO353_27355 at 5976.995 kb on + strand, within AO353_27355 at 5976.996 kb on - strand, within AO353_27355 at 5976.996 kb on - strand, within AO353_27355 at 5977.110 kb on + strand, within AO353_27355 at 5977.110 kb on + strand, within AO353_27355 at 5977.110 kb on + strand, within AO353_27355 at 5977.110 kb on + strand, within AO353_27355 at 5977.288 kb on - strand, within AO353_27355 at 5977.305 kb on + strand, within AO353_27355 at 5977.511 kb on + strand at 5977.619 kb on + strand at 5977.766 kb on + strand, within AO353_27360 at 5977.767 kb on - strand, within AO353_27360 at 5977.793 kb on + strand, within AO353_27360 at 5977.840 kb on + strand, within AO353_27360 at 5977.840 kb on + strand, within AO353_27360 at 5977.840 kb on + strand, within AO353_27360 at 5977.841 kb on - strand, within AO353_27360 at 5977.841 kb on - strand, within AO353_27360 at 5977.841 kb on - strand, within AO353_27360 at 5977.895 kb on + strand, within AO353_27360 at 5977.895 kb on + strand, within AO353_27360 at 5977.895 kb on + strand, within AO353_27360 at 5977.896 kb on - strand, within AO353_27360 at 5977.938 kb on - strand, within AO353_27360 at 5977.949 kb on + strand, within AO353_27360 at 5977.949 kb on + strand, within AO353_27360 at 5977.950 kb on - strand, within AO353_27360 at 5977.950 kb on - strand, within AO353_27360 at 5977.950 kb on - strand, within AO353_27360 at 5977.950 kb on - strand, within AO353_27360 at 5978.013 kb on + strand, within AO353_27360 at 5978.013 kb on + strand, within AO353_27360 at 5978.014 kb on - strand, within AO353_27360 at 5978.080 kb on + strand, within AO353_27360 at 5978.080 kb on + strand, within AO353_27360 at 5978.080 kb on + strand, within AO353_27360 at 5978.306 kb on + strand, within AO353_27360 at 5978.306 kb on + strand, within AO353_27360 at 5978.306 kb on + strand, within AO353_27360 at 5978.306 kb on + strand, within AO353_27360 at 5978.307 kb on - strand, within AO353_27360 at 5978.307 kb on - strand, within AO353_27360 at 5978.307 kb on - strand, within AO353_27360
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 5,975,662 + AO353_27345 0.77 +0.3 5,975,663 - AO353_27345 0.77 +0.1 5,975,663 - AO353_27345 0.77 -0.2 5,975,664 + AO353_27345 0.77 -0.3 5,975,664 + AO353_27345 0.77 +0.3 5,975,664 + AO353_27345 0.77 -0.8 5,975,664 + AO353_27345 0.77 -1.2 5,975,665 - AO353_27345 0.77 -1.1 5,975,665 - AO353_27345 0.77 +0.7 5,975,665 - AO353_27345 0.77 -0.4 5,975,665 - AO353_27345 0.77 -1.7 5,975,665 - AO353_27345 0.77 +0.8 5,975,676 + AO353_27345 0.78 -1.7 5,975,676 + AO353_27345 0.78 +1.7 5,975,676 + AO353_27345 0.78 -0.2 5,975,677 - AO353_27345 0.78 -0.3 5,975,677 - AO353_27345 0.78 -0.2 5,975,677 - AO353_27345 0.78 +0.2 5,975,677 - AO353_27345 0.78 -0.3 5,975,677 - AO353_27345 0.78 +0.6 5,975,691 + AO353_27345 0.80 -1.1 5,975,692 - AO353_27345 0.80 -1.4 5,975,692 - AO353_27345 0.80 -1.9 5,975,893 + +0.3 5,976,117 + AO353_27350 0.58 -0.9 5,976,117 + AO353_27350 0.58 +0.3 5,976,117 + AO353_27350 0.58 +0.0 5,976,118 - AO353_27350 0.59 -0.4 5,976,118 - AO353_27350 0.59 +0.1 5,976,160 + AO353_27350 0.71 +0.2 5,976,237 + +0.7 5,976,237 + -1.5 5,976,237 + +2.2 5,976,237 + -0.6 5,976,237 + -0.2 5,976,237 + +0.5 5,976,237 + -0.4 5,976,237 + +2.5 5,976,237 + -1.0 5,976,238 - -0.6 5,976,238 - -0.5 5,976,238 - +0.2 5,976,238 - -0.3 5,976,238 - -0.4 5,976,312 - -1.4 5,976,421 + AO353_27355 0.12 -0.1 5,976,421 + AO353_27355 0.12 -0.6 5,976,422 - AO353_27355 0.12 +0.6 5,976,788 + AO353_27355 0.42 -0.7 5,976,788 + AO353_27355 0.42 +0.1 5,976,788 + -0.3 5,976,788 + AO353_27355 0.42 -1.7 5,976,788 + AO353_27355 0.42 +0.0 5,976,789 - AO353_27355 0.42 -0.1 5,976,995 + AO353_27355 0.58 -0.3 5,976,996 - AO353_27355 0.58 -1.8 5,976,996 - AO353_27355 0.58 -0.4 5,977,110 + AO353_27355 0.68 -1.9 5,977,110 + AO353_27355 0.68 -0.8 5,977,110 + AO353_27355 0.68 +0.6 5,977,110 + AO353_27355 0.68 +0.4 5,977,288 - AO353_27355 0.82 +1.0 5,977,305 + AO353_27355 0.84 +0.4 5,977,511 + +0.4 5,977,619 + -1.4 5,977,766 + AO353_27360 0.16 -1.6 5,977,767 - AO353_27360 0.16 +0.7 5,977,793 + AO353_27360 0.18 +0.7 5,977,840 + AO353_27360 0.20 -0.4 5,977,840 + AO353_27360 0.20 +0.8 5,977,840 + AO353_27360 0.20 +2.0 5,977,841 - AO353_27360 0.21 +1.3 5,977,841 - AO353_27360 0.21 -0.4 5,977,841 - AO353_27360 0.21 -1.0 5,977,895 + AO353_27360 0.24 -0.3 5,977,895 + AO353_27360 0.24 +0.1 5,977,895 + AO353_27360 0.24 -0.2 5,977,896 - AO353_27360 0.24 +1.5 5,977,938 - AO353_27360 0.27 +0.1 5,977,949 + AO353_27360 0.27 +0.0 5,977,949 + AO353_27360 0.27 +0.5 5,977,950 - AO353_27360 0.27 +0.2 5,977,950 - AO353_27360 0.27 -0.3 5,977,950 - AO353_27360 0.27 +0.0 5,977,950 - AO353_27360 0.27 -1.0 5,978,013 + AO353_27360 0.31 +0.4 5,978,013 + AO353_27360 0.31 -0.2 5,978,014 - AO353_27360 0.31 -0.6 5,978,080 + AO353_27360 0.35 -0.7 5,978,080 + AO353_27360 0.35 +1.0 5,978,080 + AO353_27360 0.35 +0.4 5,978,306 + AO353_27360 0.49 -2.2 5,978,306 + AO353_27360 0.49 +0.5 5,978,306 + AO353_27360 0.49 -0.2 5,978,306 + AO353_27360 0.49 -0.2 5,978,307 - AO353_27360 0.49 -3.5 5,978,307 - AO353_27360 0.49 +0.4 5,978,307 - AO353_27360 0.49 -0.4
Or see this region's nucleotide sequence