Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23040 and AO353_23045 are separated by 2 nucleotides AO353_23045 and AO353_23050 are separated by 171 nucleotides AO353_23050 and AO353_23055 are separated by 537 nucleotides
AO353_23040: AO353_23040 - saccharopine dehydrogenase, at 5,057,123 to 5,058,250
_23040
AO353_23045: AO353_23045 - hypothetical protein, at 5,058,253 to 5,058,744
_23045
AO353_23050: AO353_23050 - SAM-dependent methyltransferase, at 5,058,916 to 5,059,632
_23050
AO353_23055: AO353_23055 - methylmalonyl-CoA decarboxylase, at 5,060,170 to 5,060,970
_23055
Position (kb)
5058
5059
5060 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5057.980 kb on + strand, within AO353_23040 at 5057.980 kb on + strand, within AO353_23040 at 5057.980 kb on + strand, within AO353_23040 at 5057.981 kb on - strand, within AO353_23040 at 5057.981 kb on - strand, within AO353_23040 at 5057.981 kb on - strand, within AO353_23040 at 5057.981 kb on - strand, within AO353_23040 at 5057.993 kb on + strand, within AO353_23040 at 5057.993 kb on + strand, within AO353_23040 at 5057.993 kb on + strand, within AO353_23040 at 5057.993 kb on + strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5057.994 kb on - strand, within AO353_23040 at 5058.058 kb on + strand, within AO353_23040 at 5058.059 kb on - strand, within AO353_23040 at 5058.059 kb on - strand, within AO353_23040 at 5058.128 kb on + strand, within AO353_23040 at 5058.128 kb on + strand, within AO353_23040 at 5058.129 kb on - strand, within AO353_23040 at 5058.182 kb on + strand at 5058.182 kb on + strand at 5058.182 kb on + strand at 5058.182 kb on + strand at 5058.182 kb on + strand at 5058.182 kb on + strand at 5058.183 kb on - strand at 5058.183 kb on - strand at 5058.183 kb on - strand at 5058.183 kb on - strand at 5058.183 kb on - strand at 5058.183 kb on - strand at 5058.213 kb on + strand at 5058.213 kb on + strand at 5058.214 kb on - strand at 5058.214 kb on - strand at 5058.214 kb on - strand at 5058.226 kb on - strand at 5058.259 kb on + strand at 5058.259 kb on + strand at 5058.259 kb on + strand at 5058.260 kb on - strand at 5058.260 kb on - strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.274 kb on + strand at 5058.275 kb on - strand at 5058.275 kb on - strand at 5058.275 kb on - strand at 5058.325 kb on + strand, within AO353_23045 at 5058.325 kb on + strand, within AO353_23045 at 5058.325 kb on + strand, within AO353_23045 at 5058.325 kb on + strand, within AO353_23045 at 5058.325 kb on + strand, within AO353_23045 at 5058.331 kb on + strand, within AO353_23045 at 5058.331 kb on + strand, within AO353_23045 at 5058.451 kb on + strand, within AO353_23045 at 5058.622 kb on + strand, within AO353_23045 at 5058.696 kb on + strand at 5058.696 kb on + strand at 5058.696 kb on + strand at 5058.696 kb on + strand at 5058.696 kb on + strand at 5058.697 kb on - strand at 5058.697 kb on - strand at 5058.697 kb on - strand at 5058.697 kb on - strand at 5058.697 kb on - strand at 5058.773 kb on - strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.886 kb on + strand at 5058.887 kb on - strand at 5058.973 kb on + strand at 5058.991 kb on - strand, within AO353_23050 at 5059.006 kb on + strand, within AO353_23050 at 5059.006 kb on + strand, within AO353_23050 at 5059.007 kb on - strand, within AO353_23050 at 5059.007 kb on - strand, within AO353_23050 at 5059.076 kb on + strand, within AO353_23050 at 5059.077 kb on - strand, within AO353_23050 at 5059.077 kb on - strand, within AO353_23050 at 5059.113 kb on + strand, within AO353_23050 at 5059.113 kb on + strand, within AO353_23050 at 5059.214 kb on + strand, within AO353_23050 at 5059.214 kb on + strand, within AO353_23050 at 5059.214 kb on + strand, within AO353_23050 at 5059.215 kb on - strand, within AO353_23050 at 5059.215 kb on - strand, within AO353_23050 at 5059.215 kb on - strand, within AO353_23050 at 5059.215 kb on - strand, within AO353_23050 at 5059.273 kb on + strand, within AO353_23050 at 5059.273 kb on + strand, within AO353_23050 at 5059.273 kb on + strand, within AO353_23050 at 5059.274 kb on - strand, within AO353_23050 at 5059.274 kb on - strand, within AO353_23050 at 5059.298 kb on + strand, within AO353_23050 at 5059.298 kb on + strand, within AO353_23050 at 5059.298 kb on + strand, within AO353_23050 at 5059.299 kb on - strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.340 kb on + strand, within AO353_23050 at 5059.341 kb on - strand, within AO353_23050 at 5059.341 kb on - strand, within AO353_23050 at 5059.341 kb on - strand, within AO353_23050 at 5059.341 kb on - strand, within AO353_23050 at 5059.361 kb on + strand, within AO353_23050 at 5059.361 kb on + strand, within AO353_23050 at 5059.361 kb on + strand, within AO353_23050 at 5059.362 kb on - strand, within AO353_23050 at 5059.362 kb on - strand, within AO353_23050 at 5059.362 kb on - strand, within AO353_23050 at 5059.399 kb on + strand, within AO353_23050 at 5059.399 kb on + strand, within AO353_23050 at 5059.400 kb on - strand, within AO353_23050 at 5059.400 kb on - strand, within AO353_23050 at 5059.405 kb on + strand, within AO353_23050 at 5059.406 kb on - strand, within AO353_23050 at 5059.406 kb on - strand, within AO353_23050 at 5059.406 kb on - strand, within AO353_23050 at 5059.406 kb on - strand, within AO353_23050 at 5059.406 kb on - strand, within AO353_23050 at 5059.620 kb on + strand at 5059.620 kb on + strand at 5059.620 kb on + strand at 5059.620 kb on + strand at 5059.621 kb on - strand at 5059.621 kb on - strand at 5059.667 kb on + strand at 5059.668 kb on - strand at 5059.788 kb on + strand at 5059.788 kb on + strand at 5059.789 kb on - strand at 5059.806 kb on + strand at 5059.807 kb on - strand at 5059.807 kb on - strand at 5059.825 kb on + strand at 5059.825 kb on + strand at 5059.825 kb on + strand at 5059.882 kb on + strand at 5059.882 kb on + strand at 5059.882 kb on + strand at 5059.882 kb on + strand at 5059.882 kb on + strand at 5059.883 kb on - strand at 5059.883 kb on - strand at 5059.883 kb on - strand at 5059.914 kb on + strand at 5059.914 kb on + strand at 5059.915 kb on - strand at 5059.915 kb on - strand at 5059.949 kb on + strand at 5059.950 kb on - strand at 5059.950 kb on - strand at 5059.950 kb on - strand at 5059.950 kb on - strand at 5059.957 kb on - strand at 5059.957 kb on - strand at 5059.957 kb on - strand at 5059.957 kb on - strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.995 kb on + strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5059.996 kb on - strand at 5060.016 kb on - strand at 5060.031 kb on + strand at 5060.031 kb on + strand at 5060.031 kb on + strand at 5060.032 kb on - strand at 5060.032 kb on - strand at 5060.032 kb on - strand at 5060.033 kb on + strand at 5060.033 kb on + strand at 5060.123 kb on + strand at 5060.124 kb on - strand at 5060.134 kb on + strand at 5060.135 kb on - strand at 5060.135 kb on - strand at 5060.425 kb on + strand, within AO353_23055 at 5060.425 kb on + strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.426 kb on - strand, within AO353_23055 at 5060.488 kb on + strand, within AO353_23055 at 5060.488 kb on + strand, within AO353_23055 at 5060.489 kb on - strand, within AO353_23055 at 5060.489 kb on - strand, within AO353_23055 at 5060.489 kb on - strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.537 kb on + strand, within AO353_23055 at 5060.538 kb on - strand, within AO353_23055
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 5,057,980 + AO353_23040 0.76 -0.6 5,057,980 + AO353_23040 0.76 +0.0 5,057,980 + AO353_23040 0.76 -0.6 5,057,981 - AO353_23040 0.76 -0.6 5,057,981 - AO353_23040 0.76 +0.5 5,057,981 - AO353_23040 0.76 +0.0 5,057,981 - AO353_23040 0.76 +0.2 5,057,993 + AO353_23040 0.77 +1.4 5,057,993 + AO353_23040 0.77 +3.3 5,057,993 + AO353_23040 0.77 +0.8 5,057,993 + AO353_23040 0.77 -0.2 5,057,994 - AO353_23040 0.77 +0.2 5,057,994 - AO353_23040 0.77 -1.4 5,057,994 - AO353_23040 0.77 +0.1 5,057,994 - AO353_23040 0.77 +1.3 5,057,994 - AO353_23040 0.77 -1.4 5,057,994 - AO353_23040 0.77 -1.4 5,057,994 - AO353_23040 0.77 -0.7 5,057,994 - AO353_23040 0.77 -0.3 5,058,058 + AO353_23040 0.83 -0.8 5,058,059 - AO353_23040 0.83 -0.8 5,058,059 - AO353_23040 0.83 -1.4 5,058,128 + AO353_23040 0.89 +0.2 5,058,128 + AO353_23040 0.89 +0.8 5,058,129 - AO353_23040 0.89 +0.0 5,058,182 + -1.0 5,058,182 + -0.7 5,058,182 + -1.4 5,058,182 + +0.8 5,058,182 + -0.8 5,058,182 + +0.8 5,058,183 - -0.6 5,058,183 - -0.8 5,058,183 - -0.6 5,058,183 - -0.5 5,058,183 - +0.0 5,058,183 - +0.2 5,058,213 + -1.3 5,058,213 + -0.1 5,058,214 - -0.1 5,058,214 - -0.0 5,058,214 - +0.5 5,058,226 - +0.1 5,058,259 + -0.2 5,058,259 + -1.8 5,058,259 + +0.5 5,058,260 - -2.9 5,058,260 - -1.9 5,058,274 + -0.8 5,058,274 + +1.3 5,058,274 + -0.2 5,058,274 + -0.4 5,058,274 + +0.1 5,058,274 + +1.8 5,058,274 + -0.0 5,058,274 + -0.6 5,058,275 - +1.6 5,058,275 - +0.5 5,058,275 - +0.2 5,058,325 + AO353_23045 0.15 +1.0 5,058,325 + AO353_23045 0.15 -1.9 5,058,325 + AO353_23045 0.15 +0.5 5,058,325 + AO353_23045 0.15 +0.1 5,058,325 + AO353_23045 0.15 +0.2 5,058,331 + AO353_23045 0.16 -2.9 5,058,331 + AO353_23045 0.16 +0.1 5,058,451 + AO353_23045 0.40 -0.3 5,058,622 + AO353_23045 0.75 +0.8 5,058,696 + -0.2 5,058,696 + -0.2 5,058,696 + -0.9 5,058,696 + -0.8 5,058,696 + +0.9 5,058,697 - -1.0 5,058,697 - -0.5 5,058,697 - -0.5 5,058,697 - -0.0 5,058,697 - -0.7 5,058,773 - -1.6 5,058,886 + -1.7 5,058,886 + -0.2 5,058,886 + +0.2 5,058,886 + +0.2 5,058,886 + -0.4 5,058,886 + -0.8 5,058,886 + +0.4 5,058,887 - +1.5 5,058,973 + -0.8 5,058,991 - AO353_23050 0.10 -0.7 5,059,006 + AO353_23050 0.13 -1.1 5,059,006 + AO353_23050 0.13 -0.9 5,059,007 - AO353_23050 0.13 -0.4 5,059,007 - AO353_23050 0.13 -0.2 5,059,076 + AO353_23050 0.22 -0.4 5,059,077 - AO353_23050 0.22 -0.4 5,059,077 - AO353_23050 0.22 +0.3 5,059,113 + AO353_23050 0.27 -1.5 5,059,113 + AO353_23050 0.27 -1.8 5,059,214 + AO353_23050 0.42 -1.6 5,059,214 + AO353_23050 0.42 -1.5 5,059,214 + AO353_23050 0.42 -1.1 5,059,215 - AO353_23050 0.42 +1.2 5,059,215 - AO353_23050 0.42 +0.3 5,059,215 - AO353_23050 0.42 -0.6 5,059,215 - AO353_23050 0.42 -0.5 5,059,273 + AO353_23050 0.50 -0.2 5,059,273 + AO353_23050 0.50 -0.4 5,059,273 + AO353_23050 0.50 -1.2 5,059,274 - AO353_23050 0.50 -1.5 5,059,274 - AO353_23050 0.50 -0.4 5,059,298 + AO353_23050 0.53 -0.4 5,059,298 + AO353_23050 0.53 +0.7 5,059,298 + AO353_23050 0.53 +0.1 5,059,299 - AO353_23050 0.53 +1.0 5,059,340 + AO353_23050 0.59 +0.3 5,059,340 + AO353_23050 0.59 -0.7 5,059,340 + AO353_23050 0.59 -1.1 5,059,340 + AO353_23050 0.59 -2.2 5,059,340 + AO353_23050 0.59 -0.1 5,059,340 + AO353_23050 0.59 -1.6 5,059,340 + AO353_23050 0.59 +1.2 5,059,341 - AO353_23050 0.59 -1.9 5,059,341 - AO353_23050 0.59 -0.6 5,059,341 - AO353_23050 0.59 -0.4 5,059,341 - AO353_23050 0.59 +0.2 5,059,361 + AO353_23050 0.62 +0.1 5,059,361 + AO353_23050 0.62 +1.2 5,059,361 + AO353_23050 0.62 +1.6 5,059,362 - AO353_23050 0.62 -0.3 5,059,362 - AO353_23050 0.62 -1.3 5,059,362 - AO353_23050 0.62 -0.7 5,059,399 + AO353_23050 0.67 +1.3 5,059,399 + AO353_23050 0.67 -0.7 5,059,400 - AO353_23050 0.68 +1.0 5,059,400 - AO353_23050 0.68 -2.1 5,059,405 + AO353_23050 0.68 -1.9 5,059,406 - AO353_23050 0.68 +0.7 5,059,406 - AO353_23050 0.68 -0.2 5,059,406 - AO353_23050 0.68 -1.4 5,059,406 - AO353_23050 0.68 +0.6 5,059,406 - AO353_23050 0.68 -1.7 5,059,620 + -1.5 5,059,620 + -0.4 5,059,620 + +1.0 5,059,620 + +0.8 5,059,621 - +0.3 5,059,621 - -1.5 5,059,667 + -0.7 5,059,668 - -1.8 5,059,788 + +0.4 5,059,788 + +0.5 5,059,789 - -0.3 5,059,806 + +0.3 5,059,807 - -0.3 5,059,807 - +0.1 5,059,825 + +0.3 5,059,825 + +2.4 5,059,825 + +0.4 5,059,882 + +0.3 5,059,882 + +0.4 5,059,882 + -0.4 5,059,882 + -0.4 5,059,882 + +0.2 5,059,883 - -0.4 5,059,883 - +1.0 5,059,883 - +0.2 5,059,914 + -0.5 5,059,914 + -2.0 5,059,915 - +0.3 5,059,915 - +0.1 5,059,949 + -1.5 5,059,950 - -0.0 5,059,950 - -0.7 5,059,950 - -1.5 5,059,950 - +2.0 5,059,957 - -0.0 5,059,957 - +0.0 5,059,957 - -0.7 5,059,957 - -0.2 5,059,995 + -2.4 5,059,995 + -0.4 5,059,995 + -1.4 5,059,995 + -1.2 5,059,995 + -1.9 5,059,995 + -2.8 5,059,995 + -0.0 5,059,995 + +0.2 5,059,995 + -1.3 5,059,995 + -1.0 5,059,996 - +0.8 5,059,996 - +0.2 5,059,996 - +0.7 5,059,996 - -0.4 5,059,996 - +1.5 5,059,996 - -0.2 5,059,996 - -0.4 5,059,996 - -0.0 5,060,016 - -0.5 5,060,031 + +0.2 5,060,031 + +0.2 5,060,031 + -0.6 5,060,032 - +0.1 5,060,032 - -1.1 5,060,032 - -0.8 5,060,033 + -0.3 5,060,033 + -0.8 5,060,123 + -0.9 5,060,124 - +1.1 5,060,134 + +0.0 5,060,135 - -0.4 5,060,135 - -0.5 5,060,425 + AO353_23055 0.32 +0.0 5,060,425 + AO353_23055 0.32 -0.2 5,060,426 - AO353_23055 0.32 +0.7 5,060,426 - AO353_23055 0.32 +0.8 5,060,426 - AO353_23055 0.32 +0.7 5,060,426 - AO353_23055 0.32 +0.7 5,060,426 - AO353_23055 0.32 -0.2 5,060,488 + AO353_23055 0.40 +1.6 5,060,488 + AO353_23055 0.40 +0.7 5,060,489 - AO353_23055 0.40 +0.5 5,060,489 - AO353_23055 0.40 -0.0 5,060,489 - AO353_23055 0.40 -1.2 5,060,537 + AO353_23055 0.46 +0.1 5,060,537 + AO353_23055 0.46 -2.4 5,060,537 + AO353_23055 0.46 -1.0 5,060,537 + AO353_23055 0.46 +0.4 5,060,538 - AO353_23055 0.46 -0.6
Or see this region's nucleotide sequence