Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_22845 and AO353_22850 are separated by 244 nucleotides AO353_22850 and AO353_22855 are separated by 191 nucleotides AO353_22855 and AO353_22860 are separated by 58 nucleotides
AO353_22845: AO353_22845 - GNAT family acetyltransferase, at 5,008,689 to 5,009,210
_22845
AO353_22850: AO353_22850 - hypothetical protein, at 5,009,455 to 5,009,949
_22850
AO353_22855: AO353_22855 - hypothetical protein, at 5,010,141 to 5,010,362
_22855
AO353_22860: AO353_22860 - cytochrome C oxidase Cbb3, at 5,010,421 to 5,011,848
_22860
Position (kb)
5010
5011 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5009.276 kb on - strand at 5009.305 kb on - strand at 5009.305 kb on - strand at 5009.305 kb on - strand at 5009.305 kb on - strand at 5009.389 kb on - strand at 5009.428 kb on + strand at 5009.465 kb on + strand at 5009.466 kb on - strand at 5009.466 kb on - strand at 5009.466 kb on - strand at 5009.466 kb on - strand at 5009.466 kb on - strand at 5009.466 kb on - strand at 5009.494 kb on + strand at 5009.494 kb on + strand at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.641 kb on + strand, within AO353_22850 at 5009.642 kb on - strand, within AO353_22850 at 5009.642 kb on - strand, within AO353_22850 at 5009.642 kb on - strand, within AO353_22850 at 5010.033 kb on + strand at 5010.033 kb on + strand at 5010.033 kb on + strand at 5010.034 kb on - strand at 5010.034 kb on - strand at 5010.066 kb on - strand at 5010.304 kb on + strand, within AO353_22855 at 5010.304 kb on + strand at 5010.305 kb on - strand, within AO353_22855 at 5010.315 kb on + strand, within AO353_22855 at 5010.319 kb on + strand, within AO353_22855 at 5010.319 kb on + strand, within AO353_22855 at 5010.319 kb on + strand, within AO353_22855 at 5010.488 kb on + strand at 5010.488 kb on + strand at 5010.488 kb on + strand at 5010.489 kb on - strand at 5010.489 kb on - strand at 5010.584 kb on + strand, within AO353_22860 at 5010.585 kb on - strand, within AO353_22860 at 5010.585 kb on - strand, within AO353_22860 at 5010.585 kb on - strand, within AO353_22860 at 5010.585 kb on - strand, within AO353_22860 at 5010.662 kb on + strand, within AO353_22860 at 5010.662 kb on + strand, within AO353_22860 at 5010.662 kb on + strand, within AO353_22860 at 5010.662 kb on + strand, within AO353_22860 at 5010.662 kb on + strand, within AO353_22860 at 5010.662 kb on + strand, within AO353_22860 at 5010.720 kb on - strand, within AO353_22860 at 5010.720 kb on - strand, within AO353_22860 at 5010.720 kb on - strand, within AO353_22860 at 5010.720 kb on - strand, within AO353_22860 at 5010.720 kb on - strand, within AO353_22860 at 5010.758 kb on + strand, within AO353_22860 at 5010.759 kb on - strand, within AO353_22860 at 5010.833 kb on + strand, within AO353_22860 at 5010.948 kb on + strand, within AO353_22860 at 5010.949 kb on - strand, within AO353_22860 at 5010.949 kb on - strand, within AO353_22860 at 5010.949 kb on - strand, within AO353_22860 at 5011.094 kb on + strand, within AO353_22860 at 5011.094 kb on + strand, within AO353_22860 at 5011.095 kb on - strand, within AO353_22860 at 5011.095 kb on - strand, within AO353_22860 at 5011.142 kb on + strand at 5011.142 kb on + strand, within AO353_22860 at 5011.142 kb on + strand, within AO353_22860 at 5011.142 kb on + strand, within AO353_22860 at 5011.143 kb on - strand, within AO353_22860 at 5011.143 kb on - strand, within AO353_22860 at 5011.143 kb on - strand, within AO353_22860 at 5011.143 kb on - strand, within AO353_22860 at 5011.143 kb on - strand, within AO353_22860 at 5011.143 kb on - strand, within AO353_22860 at 5011.175 kb on + strand, within AO353_22860 at 5011.176 kb on - strand, within AO353_22860 at 5011.178 kb on + strand, within AO353_22860 at 5011.178 kb on + strand, within AO353_22860 at 5011.178 kb on + strand, within AO353_22860 at 5011.178 kb on + strand, within AO353_22860 at 5011.179 kb on - strand, within AO353_22860 at 5011.179 kb on - strand, within AO353_22860 at 5011.179 kb on - strand, within AO353_22860 at 5011.268 kb on + strand, within AO353_22860 at 5011.269 kb on - strand, within AO353_22860 at 5011.269 kb on - strand, within AO353_22860
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 5,009,276 - +0.8 5,009,305 - +0.1 5,009,305 - -0.3 5,009,305 - -1.3 5,009,305 - -1.2 5,009,389 - -0.4 5,009,428 + -1.6 5,009,465 + +0.1 5,009,466 - +1.3 5,009,466 - -1.0 5,009,466 - +0.2 5,009,466 - +1.1 5,009,466 - +0.6 5,009,466 - +1.2 5,009,494 + +1.1 5,009,494 + -1.1 5,009,641 + AO353_22850 0.38 -0.5 5,009,641 + AO353_22850 0.38 -0.6 5,009,641 + AO353_22850 0.38 -2.2 5,009,641 + AO353_22850 0.38 -1.6 5,009,641 + AO353_22850 0.38 -1.4 5,009,641 + AO353_22850 0.38 +0.5 5,009,641 + AO353_22850 0.38 +0.1 5,009,641 + AO353_22850 0.38 +1.1 5,009,642 - AO353_22850 0.38 +2.0 5,009,642 - AO353_22850 0.38 -0.6 5,009,642 - AO353_22850 0.38 +0.4 5,010,033 + -0.0 5,010,033 + +0.2 5,010,033 + +1.5 5,010,034 - -1.2 5,010,034 - +0.8 5,010,066 - -0.5 5,010,304 + AO353_22855 0.73 -0.6 5,010,304 + +0.4 5,010,305 - AO353_22855 0.74 -1.1 5,010,315 + AO353_22855 0.78 +0.2 5,010,319 + AO353_22855 0.80 -0.2 5,010,319 + AO353_22855 0.80 -0.6 5,010,319 + AO353_22855 0.80 -0.2 5,010,488 + +0.8 5,010,488 + -0.1 5,010,488 + +1.4 5,010,489 - +0.2 5,010,489 - +0.6 5,010,584 + AO353_22860 0.11 -0.1 5,010,585 - AO353_22860 0.11 -1.2 5,010,585 - AO353_22860 0.11 -0.8 5,010,585 - AO353_22860 0.11 -0.2 5,010,585 - AO353_22860 0.11 -0.0 5,010,662 + AO353_22860 0.17 +1.8 5,010,662 + AO353_22860 0.17 -1.0 5,010,662 + AO353_22860 0.17 +1.2 5,010,662 + AO353_22860 0.17 +0.3 5,010,662 + AO353_22860 0.17 +0.5 5,010,662 + AO353_22860 0.17 +0.7 5,010,720 - AO353_22860 0.21 +1.0 5,010,720 - AO353_22860 0.21 -0.8 5,010,720 - AO353_22860 0.21 +0.7 5,010,720 - AO353_22860 0.21 -1.3 5,010,720 - AO353_22860 0.21 -0.0 5,010,758 + AO353_22860 0.24 -0.5 5,010,759 - AO353_22860 0.24 +0.2 5,010,833 + AO353_22860 0.29 -1.7 5,010,948 + AO353_22860 0.37 +0.5 5,010,949 - AO353_22860 0.37 +0.7 5,010,949 - AO353_22860 0.37 +1.0 5,010,949 - AO353_22860 0.37 -1.2 5,011,094 + AO353_22860 0.47 -0.1 5,011,094 + AO353_22860 0.47 -1.5 5,011,095 - AO353_22860 0.47 +1.1 5,011,095 - AO353_22860 0.47 -1.5 5,011,142 + +1.0 5,011,142 + AO353_22860 0.50 -0.4 5,011,142 + AO353_22860 0.50 +0.9 5,011,142 + AO353_22860 0.50 -1.7 5,011,143 - AO353_22860 0.51 +1.4 5,011,143 - AO353_22860 0.51 +0.4 5,011,143 - AO353_22860 0.51 -0.6 5,011,143 - AO353_22860 0.51 +0.2 5,011,143 - AO353_22860 0.51 -0.4 5,011,143 - AO353_22860 0.51 -0.4 5,011,175 + AO353_22860 0.53 +0.2 5,011,176 - AO353_22860 0.53 +1.3 5,011,178 + AO353_22860 0.53 +0.1 5,011,178 + AO353_22860 0.53 -1.1 5,011,178 + AO353_22860 0.53 -0.0 5,011,178 + AO353_22860 0.53 +0.1 5,011,179 - AO353_22860 0.53 -1.8 5,011,179 - AO353_22860 0.53 -0.8 5,011,179 - AO353_22860 0.53 +1.2 5,011,268 + AO353_22860 0.59 +0.6 5,011,269 - AO353_22860 0.59 -0.4 5,011,269 - AO353_22860 0.59 -0.7
Or see this region's nucleotide sequence