Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_21435 and AO353_21440 are separated by 139 nucleotides AO353_21440 and AO353_21445 are separated by 39 nucleotides AO353_21445 and AO353_21450 overlap by 4 nucleotides AO353_21450 and AO353_21455 overlap by 4 nucleotides AO353_21455 and AO353_21460 overlap by 4 nucleotides
AO353_21435: AO353_21435 - ABC transporter substrate-binding protein, at 4,691,068 to 4,692,081
_21435
AO353_21440: AO353_21440 - hypothetical protein, at 4,692,221 to 4,692,658
_21440
AO353_21445: AO353_21445 - cation:proton antiporter, at 4,692,698 to 4,693,066
_21445
AO353_21450: AO353_21450 - cation:proton antiporter, at 4,693,063 to 4,693,341
_21450
AO353_21455: AO353_21455 - cation:proton antiporter, at 4,693,338 to 4,693,826
_21455
AO353_21460: AO353_21460 - cation:proton antiporter, at 4,693,823 to 4,695,508
_21460
Position (kb)
4692
4693
4694 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4691.713 kb on + strand, within AO353_21435 at 4691.713 kb on + strand, within AO353_21435 at 4691.714 kb on - strand, within AO353_21435 at 4691.714 kb on - strand, within AO353_21435 at 4691.714 kb on - strand, within AO353_21435 at 4691.714 kb on - strand, within AO353_21435 at 4691.716 kb on + strand at 4691.716 kb on + strand, within AO353_21435 at 4691.916 kb on + strand, within AO353_21435 at 4691.917 kb on - strand, within AO353_21435 at 4692.079 kb on + strand at 4692.079 kb on + strand at 4692.080 kb on - strand at 4692.284 kb on + strand, within AO353_21440 at 4692.284 kb on + strand, within AO353_21440 at 4692.285 kb on - strand, within AO353_21440 at 4692.333 kb on + strand, within AO353_21440 at 4692.333 kb on + strand, within AO353_21440 at 4692.333 kb on + strand, within AO353_21440 at 4692.333 kb on + strand, within AO353_21440 at 4692.334 kb on - strand, within AO353_21440 at 4692.334 kb on - strand, within AO353_21440 at 4692.334 kb on - strand, within AO353_21440 at 4692.603 kb on - strand, within AO353_21440 at 4692.663 kb on + strand at 4692.664 kb on - strand at 4692.664 kb on - strand at 4692.951 kb on + strand, within AO353_21445 at 4692.951 kb on + strand, within AO353_21445 at 4692.951 kb on + strand, within AO353_21445 at 4692.951 kb on + strand, within AO353_21445 at 4692.951 kb on + strand, within AO353_21445 at 4692.952 kb on - strand, within AO353_21445 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.154 kb on + strand, within AO353_21450 at 4693.155 kb on - strand, within AO353_21450 at 4693.155 kb on - strand, within AO353_21450 at 4693.155 kb on - strand, within AO353_21450 at 4693.155 kb on - strand, within AO353_21450 at 4693.170 kb on - strand, within AO353_21450 at 4693.209 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.211 kb on + strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.212 kb on - strand, within AO353_21450 at 4693.217 kb on + strand, within AO353_21450 at 4693.217 kb on + strand, within AO353_21450 at 4693.218 kb on - strand, within AO353_21450 at 4693.218 kb on - strand, within AO353_21450 at 4693.218 kb on - strand, within AO353_21450 at 4693.218 kb on - strand, within AO353_21450 at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.369 kb on + strand at 4693.370 kb on - strand at 4693.370 kb on - strand at 4693.370 kb on - strand at 4693.370 kb on - strand at 4693.370 kb on - strand at 4693.370 kb on - strand at 4693.667 kb on + strand, within AO353_21455 at 4693.734 kb on + strand, within AO353_21455 at 4693.735 kb on - strand, within AO353_21455 at 4693.735 kb on - strand, within AO353_21455 at 4693.899 kb on + strand at 4693.899 kb on + strand at 4693.899 kb on + strand at 4693.899 kb on + strand at 4693.899 kb on + strand at 4693.899 kb on + strand at 4693.899 kb on + strand at 4693.899 kb on + strand at 4693.899 kb on + strand at 4693.900 kb on - strand at 4693.900 kb on - strand at 4693.900 kb on - strand at 4693.900 kb on - strand at 4693.900 kb on - strand at 4693.976 kb on + strand at 4693.976 kb on + strand at 4693.976 kb on + strand at 4693.976 kb on + strand at 4693.976 kb on + strand at 4693.976 kb on + strand at 4693.977 kb on - strand at 4693.977 kb on - strand at 4693.977 kb on - strand at 4693.977 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 4,691,713 + AO353_21435 0.64 -1.1 4,691,713 + AO353_21435 0.64 -0.1 4,691,714 - AO353_21435 0.64 +0.2 4,691,714 - AO353_21435 0.64 +1.0 4,691,714 - AO353_21435 0.64 -0.1 4,691,714 - AO353_21435 0.64 -0.2 4,691,716 + +0.7 4,691,716 + AO353_21435 0.64 -2.6 4,691,916 + AO353_21435 0.84 +0.8 4,691,917 - AO353_21435 0.84 +0.8 4,692,079 + +1.4 4,692,079 + -1.2 4,692,080 - +1.9 4,692,284 + AO353_21440 0.14 +1.4 4,692,284 + AO353_21440 0.14 -1.1 4,692,285 - AO353_21440 0.15 +0.7 4,692,333 + AO353_21440 0.26 +0.4 4,692,333 + AO353_21440 0.26 +0.1 4,692,333 + AO353_21440 0.26 +0.0 4,692,333 + AO353_21440 0.26 -1.3 4,692,334 - AO353_21440 0.26 +1.2 4,692,334 - AO353_21440 0.26 +0.4 4,692,334 - AO353_21440 0.26 +0.9 4,692,603 - AO353_21440 0.87 -0.8 4,692,663 + +0.9 4,692,664 - -0.6 4,692,664 - +1.8 4,692,951 + AO353_21445 0.69 -0.3 4,692,951 + AO353_21445 0.69 +1.2 4,692,951 + AO353_21445 0.69 +0.9 4,692,951 + AO353_21445 0.69 +0.3 4,692,951 + AO353_21445 0.69 -1.6 4,692,952 - AO353_21445 0.69 +0.6 4,693,154 + AO353_21450 0.33 -0.2 4,693,154 + AO353_21450 0.33 -0.8 4,693,154 + AO353_21450 0.33 +0.1 4,693,154 + AO353_21450 0.33 +1.2 4,693,154 + AO353_21450 0.33 +0.3 4,693,154 + AO353_21450 0.33 +0.3 4,693,154 + AO353_21450 0.33 +0.6 4,693,155 - AO353_21450 0.33 +1.2 4,693,155 - AO353_21450 0.33 -1.2 4,693,155 - AO353_21450 0.33 -0.7 4,693,155 - AO353_21450 0.33 +1.3 4,693,170 - AO353_21450 0.38 -0.2 4,693,209 + AO353_21450 0.52 -1.7 4,693,211 + AO353_21450 0.53 -0.9 4,693,211 + AO353_21450 0.53 -1.0 4,693,211 + AO353_21450 0.53 +0.0 4,693,211 + AO353_21450 0.53 +0.6 4,693,211 + AO353_21450 0.53 -0.8 4,693,211 + AO353_21450 0.53 -0.1 4,693,211 + AO353_21450 0.53 +0.9 4,693,211 + AO353_21450 0.53 -0.6 4,693,211 + AO353_21450 0.53 -0.3 4,693,211 + AO353_21450 0.53 -0.4 4,693,211 + AO353_21450 0.53 -0.3 4,693,212 - AO353_21450 0.53 -0.2 4,693,212 - AO353_21450 0.53 -1.2 4,693,212 - AO353_21450 0.53 +0.3 4,693,212 - AO353_21450 0.53 -0.2 4,693,212 - AO353_21450 0.53 +0.2 4,693,212 - AO353_21450 0.53 -0.4 4,693,212 - AO353_21450 0.53 -1.8 4,693,212 - AO353_21450 0.53 -0.6 4,693,217 + AO353_21450 0.55 -0.6 4,693,217 + AO353_21450 0.55 +1.8 4,693,218 - AO353_21450 0.56 -0.1 4,693,218 - AO353_21450 0.56 -0.3 4,693,218 - AO353_21450 0.56 -1.6 4,693,218 - AO353_21450 0.56 -0.5 4,693,369 + +0.4 4,693,369 + -0.9 4,693,369 + -0.7 4,693,369 + +0.3 4,693,369 + +0.2 4,693,369 + +0.9 4,693,369 + +0.5 4,693,369 + -1.5 4,693,369 + -0.7 4,693,370 - +1.0 4,693,370 - -0.7 4,693,370 - -1.8 4,693,370 - +1.6 4,693,370 - +0.3 4,693,370 - +0.4 4,693,667 + AO353_21455 0.67 +0.4 4,693,734 + AO353_21455 0.81 +0.0 4,693,735 - AO353_21455 0.81 +0.6 4,693,735 - AO353_21455 0.81 +0.0 4,693,899 + -0.8 4,693,899 + -1.7 4,693,899 + -0.1 4,693,899 + -0.9 4,693,899 + +1.2 4,693,899 + +1.6 4,693,899 + -0.9 4,693,899 + -2.0 4,693,899 + +0.0 4,693,900 - -0.4 4,693,900 - +0.4 4,693,900 - -0.2 4,693,900 - +0.5 4,693,900 - -1.3 4,693,976 + -0.4 4,693,976 + +0.0 4,693,976 + -1.4 4,693,976 + +1.8 4,693,976 + -0.6 4,693,976 + -0.2 4,693,977 - +0.3 4,693,977 - -0.8 4,693,977 - +0.6 4,693,977 - -0.0
Or see this region's nucleotide sequence