Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_14565 and AO353_14570 overlap by 4 nucleotides AO353_14570 and AO353_14575 overlap by 11 nucleotides
AO353_14565: AO353_14565 - chromosome partitioning protein ParA, at 3,228,317 to 3,231,157
_14565
AO353_14570: AO353_14570 - chromosome partitioning protein, at 3,231,154 to 3,231,867
_14570
AO353_14575: AO353_14575 - hypothetical protein, at 3,231,857 to 3,233,134
_14575
Position (kb)
3231
3232 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3230.317 kb on - strand, within AO353_14565 at 3230.448 kb on + strand, within AO353_14565 at 3230.448 kb on + strand, within AO353_14565 at 3230.448 kb on + strand, within AO353_14565 at 3230.449 kb on - strand, within AO353_14565 at 3230.449 kb on - strand, within AO353_14565 at 3230.449 kb on - strand, within AO353_14565 at 3230.502 kb on + strand, within AO353_14565 at 3230.502 kb on + strand, within AO353_14565 at 3230.502 kb on + strand, within AO353_14565 at 3230.502 kb on + strand, within AO353_14565 at 3230.502 kb on + strand, within AO353_14565 at 3230.502 kb on + strand, within AO353_14565 at 3230.502 kb on + strand, within AO353_14565 at 3230.503 kb on - strand, within AO353_14565 at 3230.503 kb on - strand, within AO353_14565 at 3230.503 kb on - strand, within AO353_14565 at 3230.503 kb on - strand, within AO353_14565 at 3230.503 kb on - strand, within AO353_14565 at 3230.503 kb on - strand, within AO353_14565 at 3230.503 kb on - strand, within AO353_14565 at 3230.785 kb on + strand, within AO353_14565 at 3230.785 kb on + strand, within AO353_14565 at 3230.786 kb on - strand, within AO353_14565 at 3230.922 kb on + strand at 3230.922 kb on + strand at 3230.922 kb on + strand at 3230.922 kb on + strand at 3230.922 kb on + strand at 3230.922 kb on + strand at 3230.922 kb on + strand at 3230.922 kb on + strand at 3230.922 kb on + strand at 3230.923 kb on - strand at 3230.923 kb on - strand at 3230.923 kb on - strand at 3230.923 kb on - strand at 3230.923 kb on - strand at 3230.923 kb on - strand at 3230.923 kb on - strand at 3230.943 kb on + strand at 3230.943 kb on + strand at 3230.943 kb on + strand at 3230.943 kb on + strand at 3230.970 kb on + strand at 3230.970 kb on + strand at 3230.970 kb on + strand at 3230.971 kb on - strand at 3230.971 kb on - strand at 3230.971 kb on - strand at 3230.971 kb on - strand at 3230.971 kb on - strand at 3230.971 kb on - strand at 3230.971 kb on - strand at 3231.061 kb on - strand at 3231.142 kb on - strand at 3231.226 kb on + strand, within AO353_14570 at 3231.226 kb on + strand, within AO353_14570 at 3231.227 kb on - strand, within AO353_14570 at 3231.407 kb on + strand, within AO353_14570 at 3231.407 kb on + strand, within AO353_14570 at 3231.407 kb on + strand, within AO353_14570 at 3231.407 kb on + strand, within AO353_14570 at 3231.408 kb on - strand, within AO353_14570 at 3231.408 kb on - strand, within AO353_14570 at 3231.408 kb on - strand, within AO353_14570 at 3231.408 kb on - strand, within AO353_14570 at 3231.515 kb on + strand, within AO353_14570 at 3231.683 kb on + strand, within AO353_14570 at 3231.683 kb on + strand, within AO353_14570 at 3231.683 kb on + strand, within AO353_14570 at 3231.683 kb on + strand, within AO353_14570 at 3231.683 kb on + strand, within AO353_14570 at 3231.684 kb on - strand, within AO353_14570 at 3231.684 kb on - strand, within AO353_14570 at 3231.684 kb on - strand, within AO353_14570 at 3231.684 kb on - strand, within AO353_14570 at 3231.686 kb on + strand, within AO353_14570 at 3231.686 kb on + strand, within AO353_14570 at 3231.686 kb on + strand, within AO353_14570 at 3231.686 kb on + strand, within AO353_14570 at 3231.687 kb on - strand, within AO353_14570 at 3231.687 kb on - strand, within AO353_14570 at 3231.774 kb on - strand, within AO353_14570 at 3231.774 kb on - strand, within AO353_14570 at 3231.804 kb on - strand at 3231.854 kb on - strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.868 kb on + strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.869 kb on - strand at 3231.957 kb on + strand at 3231.958 kb on - strand at 3231.958 kb on - strand at 3232.004 kb on + strand, within AO353_14575 at 3232.005 kb on - strand, within AO353_14575 at 3232.005 kb on - strand, within AO353_14575 at 3232.005 kb on - strand, within AO353_14575 at 3232.020 kb on + strand, within AO353_14575 at 3232.021 kb on - strand, within AO353_14575 at 3232.212 kb on + strand, within AO353_14575 at 3232.213 kb on - strand, within AO353_14575 at 3232.213 kb on - strand, within AO353_14575 at 3232.213 kb on - strand, within AO353_14575 at 3232.218 kb on + strand, within AO353_14575 at 3232.218 kb on + strand, within AO353_14575 at 3232.218 kb on + strand, within AO353_14575 at 3232.218 kb on + strand, within AO353_14575 at 3232.219 kb on - strand, within AO353_14575 at 3232.219 kb on - strand, within AO353_14575 at 3232.219 kb on - strand, within AO353_14575 at 3232.219 kb on - strand, within AO353_14575 at 3232.252 kb on + strand, within AO353_14575 at 3232.252 kb on + strand, within AO353_14575 at 3232.252 kb on + strand, within AO353_14575 at 3232.253 kb on - strand, within AO353_14575 at 3232.253 kb on - strand, within AO353_14575 at 3232.253 kb on - strand, within AO353_14575 at 3232.253 kb on - strand, within AO353_14575 at 3232.253 kb on - strand, within AO353_14575 at 3232.596 kb on + strand, within AO353_14575 at 3232.596 kb on + strand, within AO353_14575 at 3232.596 kb on + strand, within AO353_14575 at 3232.596 kb on + strand, within AO353_14575 at 3232.597 kb on - strand, within AO353_14575 at 3232.597 kb on - strand, within AO353_14575 at 3232.597 kb on - strand, within AO353_14575 at 3232.626 kb on + strand, within AO353_14575 at 3232.626 kb on + strand, within AO353_14575 at 3232.626 kb on + strand, within AO353_14575 at 3232.800 kb on + strand, within AO353_14575 at 3232.801 kb on - strand, within AO353_14575 at 3232.830 kb on + strand, within AO353_14575 at 3232.830 kb on + strand, within AO353_14575 at 3232.830 kb on + strand, within AO353_14575 at 3232.830 kb on + strand, within AO353_14575 at 3232.830 kb on + strand, within AO353_14575 at 3232.830 kb on + strand, within AO353_14575
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 3,230,317 - AO353_14565 0.70 -0.3 3,230,448 + AO353_14565 0.75 +0.6 3,230,448 + AO353_14565 0.75 +0.4 3,230,448 + AO353_14565 0.75 +0.1 3,230,449 - AO353_14565 0.75 -1.9 3,230,449 - AO353_14565 0.75 -0.8 3,230,449 - AO353_14565 0.75 +0.2 3,230,502 + AO353_14565 0.77 +1.4 3,230,502 + AO353_14565 0.77 +1.2 3,230,502 + AO353_14565 0.77 +1.3 3,230,502 + AO353_14565 0.77 -1.3 3,230,502 + AO353_14565 0.77 -1.2 3,230,502 + AO353_14565 0.77 -1.3 3,230,502 + AO353_14565 0.77 +0.0 3,230,503 - AO353_14565 0.77 -0.5 3,230,503 - AO353_14565 0.77 +0.2 3,230,503 - AO353_14565 0.77 +0.7 3,230,503 - AO353_14565 0.77 -0.5 3,230,503 - AO353_14565 0.77 -0.1 3,230,503 - AO353_14565 0.77 +0.0 3,230,503 - AO353_14565 0.77 +0.4 3,230,785 + AO353_14565 0.87 +0.7 3,230,785 + AO353_14565 0.87 +1.4 3,230,786 - AO353_14565 0.87 -1.4 3,230,922 + +1.2 3,230,922 + +0.2 3,230,922 + -0.5 3,230,922 + -0.6 3,230,922 + +0.7 3,230,922 + +0.6 3,230,922 + -1.0 3,230,922 + +0.4 3,230,922 + -0.3 3,230,923 - -1.1 3,230,923 - +0.2 3,230,923 - -0.4 3,230,923 - +0.5 3,230,923 - +0.8 3,230,923 - -0.1 3,230,923 - +0.2 3,230,943 + -0.2 3,230,943 + -0.4 3,230,943 + -2.2 3,230,943 + +0.9 3,230,970 + +0.5 3,230,970 + +0.2 3,230,970 + +0.4 3,230,971 - -2.4 3,230,971 - +0.6 3,230,971 - +1.0 3,230,971 - +1.4 3,230,971 - -1.3 3,230,971 - +0.3 3,230,971 - +1.0 3,231,061 - -0.7 3,231,142 - -0.4 3,231,226 + AO353_14570 0.10 +1.6 3,231,226 + AO353_14570 0.10 -1.2 3,231,227 - AO353_14570 0.10 +0.6 3,231,407 + AO353_14570 0.35 -1.9 3,231,407 + AO353_14570 0.35 -0.5 3,231,407 + AO353_14570 0.35 +0.7 3,231,407 + AO353_14570 0.35 +1.1 3,231,408 - AO353_14570 0.36 +0.5 3,231,408 - AO353_14570 0.36 +1.3 3,231,408 - AO353_14570 0.36 +1.0 3,231,408 - AO353_14570 0.36 +0.6 3,231,515 + AO353_14570 0.51 +0.2 3,231,683 + AO353_14570 0.74 -0.3 3,231,683 + AO353_14570 0.74 +1.2 3,231,683 + AO353_14570 0.74 -1.4 3,231,683 + AO353_14570 0.74 -1.0 3,231,683 + AO353_14570 0.74 -0.8 3,231,684 - AO353_14570 0.74 -0.9 3,231,684 - AO353_14570 0.74 -0.1 3,231,684 - AO353_14570 0.74 +1.7 3,231,684 - AO353_14570 0.74 +2.0 3,231,686 + AO353_14570 0.75 +0.1 3,231,686 + AO353_14570 0.75 -1.3 3,231,686 + AO353_14570 0.75 +1.4 3,231,686 + AO353_14570 0.75 +0.2 3,231,687 - AO353_14570 0.75 +1.0 3,231,687 - AO353_14570 0.75 -1.5 3,231,774 - AO353_14570 0.87 -0.2 3,231,774 - AO353_14570 0.87 +1.3 3,231,804 - -2.3 3,231,854 - +0.0 3,231,868 + -0.8 3,231,868 + +0.6 3,231,868 + +0.4 3,231,868 + -0.4 3,231,868 + -0.6 3,231,868 + +0.1 3,231,868 + -0.4 3,231,868 + -0.8 3,231,868 + -1.3 3,231,868 + -0.0 3,231,868 + +0.1 3,231,868 + +1.1 3,231,868 + -0.0 3,231,868 + -1.0 3,231,868 + -0.3 3,231,869 - +0.4 3,231,869 - +0.3 3,231,869 - +0.1 3,231,869 - +0.6 3,231,869 - -0.9 3,231,869 - -0.6 3,231,869 - -1.5 3,231,869 - -0.5 3,231,869 - -1.6 3,231,869 - +0.1 3,231,869 - +0.1 3,231,869 - +0.4 3,231,869 - +0.5 3,231,957 + +0.7 3,231,958 - +0.5 3,231,958 - +1.2 3,232,004 + AO353_14575 0.12 +0.4 3,232,005 - AO353_14575 0.12 -0.2 3,232,005 - AO353_14575 0.12 +0.3 3,232,005 - AO353_14575 0.12 +1.7 3,232,020 + AO353_14575 0.13 +0.1 3,232,021 - AO353_14575 0.13 -0.4 3,232,212 + AO353_14575 0.28 +1.2 3,232,213 - AO353_14575 0.28 -1.2 3,232,213 - AO353_14575 0.28 -2.3 3,232,213 - AO353_14575 0.28 +1.7 3,232,218 + AO353_14575 0.28 +0.5 3,232,218 + AO353_14575 0.28 +0.8 3,232,218 + AO353_14575 0.28 -0.6 3,232,218 + AO353_14575 0.28 +1.9 3,232,219 - AO353_14575 0.28 -0.0 3,232,219 - AO353_14575 0.28 -0.0 3,232,219 - AO353_14575 0.28 +0.8 3,232,219 - AO353_14575 0.28 +0.2 3,232,252 + AO353_14575 0.31 +0.8 3,232,252 + AO353_14575 0.31 +0.1 3,232,252 + AO353_14575 0.31 +0.3 3,232,253 - AO353_14575 0.31 -0.5 3,232,253 - AO353_14575 0.31 +0.5 3,232,253 - AO353_14575 0.31 +1.0 3,232,253 - AO353_14575 0.31 +1.1 3,232,253 - AO353_14575 0.31 +0.0 3,232,596 + AO353_14575 0.58 +0.8 3,232,596 + AO353_14575 0.58 +0.4 3,232,596 + AO353_14575 0.58 -0.0 3,232,596 + AO353_14575 0.58 +0.4 3,232,597 - AO353_14575 0.58 -0.7 3,232,597 - AO353_14575 0.58 -1.0 3,232,597 - AO353_14575 0.58 +0.7 3,232,626 + AO353_14575 0.60 +0.2 3,232,626 + AO353_14575 0.60 -0.6 3,232,626 + AO353_14575 0.60 +0.1 3,232,800 + AO353_14575 0.74 -0.0 3,232,801 - AO353_14575 0.74 -1.1 3,232,830 + AO353_14575 0.76 +1.0 3,232,830 + AO353_14575 0.76 -1.5 3,232,830 + AO353_14575 0.76 -0.5 3,232,830 + AO353_14575 0.76 +0.6 3,232,830 + AO353_14575 0.76 -0.4 3,232,830 + AO353_14575 0.76 -0.3
Or see this region's nucleotide sequence