Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_14570

Experiment: Cobalt chloride 0.32 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_14565 and AO353_14570 overlap by 4 nucleotidesAO353_14570 and AO353_14575 overlap by 11 nucleotides AO353_14565: AO353_14565 - chromosome partitioning protein ParA, at 3,228,317 to 3,231,157 _14565 AO353_14570: AO353_14570 - chromosome partitioning protein, at 3,231,154 to 3,231,867 _14570 AO353_14575: AO353_14575 - hypothetical protein, at 3,231,857 to 3,233,134 _14575 Position (kb) 3231 3232Strain fitness (log2 ratio) -2 -1 0 1 2at 3230.317 kb on - strand, within AO353_14565at 3230.448 kb on + strand, within AO353_14565at 3230.448 kb on + strand, within AO353_14565at 3230.448 kb on + strand, within AO353_14565at 3230.449 kb on - strand, within AO353_14565at 3230.449 kb on - strand, within AO353_14565at 3230.449 kb on - strand, within AO353_14565at 3230.502 kb on + strand, within AO353_14565at 3230.502 kb on + strand, within AO353_14565at 3230.502 kb on + strand, within AO353_14565at 3230.502 kb on + strand, within AO353_14565at 3230.502 kb on + strand, within AO353_14565at 3230.502 kb on + strand, within AO353_14565at 3230.502 kb on + strand, within AO353_14565at 3230.503 kb on - strand, within AO353_14565at 3230.503 kb on - strand, within AO353_14565at 3230.503 kb on - strand, within AO353_14565at 3230.503 kb on - strand, within AO353_14565at 3230.503 kb on - strand, within AO353_14565at 3230.503 kb on - strand, within AO353_14565at 3230.503 kb on - strand, within AO353_14565at 3230.785 kb on + strand, within AO353_14565at 3230.785 kb on + strand, within AO353_14565at 3230.786 kb on - strand, within AO353_14565at 3230.922 kb on + strandat 3230.922 kb on + strandat 3230.922 kb on + strandat 3230.922 kb on + strandat 3230.922 kb on + strandat 3230.922 kb on + strandat 3230.922 kb on + strandat 3230.922 kb on + strandat 3230.922 kb on + strandat 3230.923 kb on - strandat 3230.923 kb on - strandat 3230.923 kb on - strandat 3230.923 kb on - strandat 3230.923 kb on - strandat 3230.923 kb on - strandat 3230.923 kb on - strandat 3230.943 kb on + strandat 3230.943 kb on + strandat 3230.943 kb on + strandat 3230.943 kb on + strandat 3230.970 kb on + strandat 3230.970 kb on + strandat 3230.970 kb on + strandat 3230.971 kb on - strandat 3230.971 kb on - strandat 3230.971 kb on - strandat 3230.971 kb on - strandat 3230.971 kb on - strandat 3230.971 kb on - strandat 3230.971 kb on - strandat 3231.061 kb on - strandat 3231.142 kb on - strandat 3231.226 kb on + strand, within AO353_14570at 3231.226 kb on + strand, within AO353_14570at 3231.227 kb on - strand, within AO353_14570at 3231.407 kb on + strand, within AO353_14570at 3231.407 kb on + strand, within AO353_14570at 3231.407 kb on + strand, within AO353_14570at 3231.407 kb on + strand, within AO353_14570at 3231.408 kb on - strand, within AO353_14570at 3231.408 kb on - strand, within AO353_14570at 3231.408 kb on - strand, within AO353_14570at 3231.408 kb on - strand, within AO353_14570at 3231.515 kb on + strand, within AO353_14570at 3231.683 kb on + strand, within AO353_14570at 3231.683 kb on + strand, within AO353_14570at 3231.683 kb on + strand, within AO353_14570at 3231.683 kb on + strand, within AO353_14570at 3231.683 kb on + strand, within AO353_14570at 3231.684 kb on - strand, within AO353_14570at 3231.684 kb on - strand, within AO353_14570at 3231.684 kb on - strand, within AO353_14570at 3231.684 kb on - strand, within AO353_14570at 3231.686 kb on + strand, within AO353_14570at 3231.686 kb on + strand, within AO353_14570at 3231.686 kb on + strand, within AO353_14570at 3231.686 kb on + strand, within AO353_14570at 3231.687 kb on - strand, within AO353_14570at 3231.687 kb on - strand, within AO353_14570at 3231.774 kb on - strand, within AO353_14570at 3231.774 kb on - strand, within AO353_14570at 3231.804 kb on - strandat 3231.854 kb on - strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.868 kb on + strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.869 kb on - strandat 3231.957 kb on + strandat 3231.958 kb on - strandat 3231.958 kb on - strandat 3232.004 kb on + strand, within AO353_14575at 3232.005 kb on - strand, within AO353_14575at 3232.005 kb on - strand, within AO353_14575at 3232.005 kb on - strand, within AO353_14575at 3232.020 kb on + strand, within AO353_14575at 3232.021 kb on - strand, within AO353_14575at 3232.212 kb on + strand, within AO353_14575at 3232.213 kb on - strand, within AO353_14575at 3232.213 kb on - strand, within AO353_14575at 3232.213 kb on - strand, within AO353_14575at 3232.218 kb on + strand, within AO353_14575at 3232.218 kb on + strand, within AO353_14575at 3232.218 kb on + strand, within AO353_14575at 3232.218 kb on + strand, within AO353_14575at 3232.219 kb on - strand, within AO353_14575at 3232.219 kb on - strand, within AO353_14575at 3232.219 kb on - strand, within AO353_14575at 3232.219 kb on - strand, within AO353_14575at 3232.252 kb on + strand, within AO353_14575at 3232.252 kb on + strand, within AO353_14575at 3232.252 kb on + strand, within AO353_14575at 3232.253 kb on - strand, within AO353_14575at 3232.253 kb on - strand, within AO353_14575at 3232.253 kb on - strand, within AO353_14575at 3232.253 kb on - strand, within AO353_14575at 3232.253 kb on - strand, within AO353_14575at 3232.596 kb on + strand, within AO353_14575at 3232.596 kb on + strand, within AO353_14575at 3232.596 kb on + strand, within AO353_14575at 3232.596 kb on + strand, within AO353_14575at 3232.597 kb on - strand, within AO353_14575at 3232.597 kb on - strand, within AO353_14575at 3232.597 kb on - strand, within AO353_14575at 3232.626 kb on + strand, within AO353_14575at 3232.626 kb on + strand, within AO353_14575at 3232.626 kb on + strand, within AO353_14575at 3232.800 kb on + strand, within AO353_14575at 3232.801 kb on - strand, within AO353_14575at 3232.830 kb on + strand, within AO353_14575at 3232.830 kb on + strand, within AO353_14575at 3232.830 kb on + strand, within AO353_14575at 3232.830 kb on + strand, within AO353_14575at 3232.830 kb on + strand, within AO353_14575at 3232.830 kb on + strand, within AO353_14575

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM
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3,230,317 - AO353_14565 0.70 -0.3
3,230,448 + AO353_14565 0.75 +0.6
3,230,448 + AO353_14565 0.75 +0.4
3,230,448 + AO353_14565 0.75 +0.1
3,230,449 - AO353_14565 0.75 -1.9
3,230,449 - AO353_14565 0.75 -0.8
3,230,449 - AO353_14565 0.75 +0.2
3,230,502 + AO353_14565 0.77 +1.4
3,230,502 + AO353_14565 0.77 +1.2
3,230,502 + AO353_14565 0.77 +1.3
3,230,502 + AO353_14565 0.77 -1.3
3,230,502 + AO353_14565 0.77 -1.2
3,230,502 + AO353_14565 0.77 -1.3
3,230,502 + AO353_14565 0.77 +0.0
3,230,503 - AO353_14565 0.77 -0.5
3,230,503 - AO353_14565 0.77 +0.2
3,230,503 - AO353_14565 0.77 +0.7
3,230,503 - AO353_14565 0.77 -0.5
3,230,503 - AO353_14565 0.77 -0.1
3,230,503 - AO353_14565 0.77 +0.0
3,230,503 - AO353_14565 0.77 +0.4
3,230,785 + AO353_14565 0.87 +0.7
3,230,785 + AO353_14565 0.87 +1.4
3,230,786 - AO353_14565 0.87 -1.4
3,230,922 + +1.2
3,230,922 + +0.2
3,230,922 + -0.5
3,230,922 + -0.6
3,230,922 + +0.7
3,230,922 + +0.6
3,230,922 + -1.0
3,230,922 + +0.4
3,230,922 + -0.3
3,230,923 - -1.1
3,230,923 - +0.2
3,230,923 - -0.4
3,230,923 - +0.5
3,230,923 - +0.8
3,230,923 - -0.1
3,230,923 - +0.2
3,230,943 + -0.2
3,230,943 + -0.4
3,230,943 + -2.2
3,230,943 + +0.9
3,230,970 + +0.5
3,230,970 + +0.2
3,230,970 + +0.4
3,230,971 - -2.4
3,230,971 - +0.6
3,230,971 - +1.0
3,230,971 - +1.4
3,230,971 - -1.3
3,230,971 - +0.3
3,230,971 - +1.0
3,231,061 - -0.7
3,231,142 - -0.4
3,231,226 + AO353_14570 0.10 +1.6
3,231,226 + AO353_14570 0.10 -1.2
3,231,227 - AO353_14570 0.10 +0.6
3,231,407 + AO353_14570 0.35 -1.9
3,231,407 + AO353_14570 0.35 -0.5
3,231,407 + AO353_14570 0.35 +0.7
3,231,407 + AO353_14570 0.35 +1.1
3,231,408 - AO353_14570 0.36 +0.5
3,231,408 - AO353_14570 0.36 +1.3
3,231,408 - AO353_14570 0.36 +1.0
3,231,408 - AO353_14570 0.36 +0.6
3,231,515 + AO353_14570 0.51 +0.2
3,231,683 + AO353_14570 0.74 -0.3
3,231,683 + AO353_14570 0.74 +1.2
3,231,683 + AO353_14570 0.74 -1.4
3,231,683 + AO353_14570 0.74 -1.0
3,231,683 + AO353_14570 0.74 -0.8
3,231,684 - AO353_14570 0.74 -0.9
3,231,684 - AO353_14570 0.74 -0.1
3,231,684 - AO353_14570 0.74 +1.7
3,231,684 - AO353_14570 0.74 +2.0
3,231,686 + AO353_14570 0.75 +0.1
3,231,686 + AO353_14570 0.75 -1.3
3,231,686 + AO353_14570 0.75 +1.4
3,231,686 + AO353_14570 0.75 +0.2
3,231,687 - AO353_14570 0.75 +1.0
3,231,687 - AO353_14570 0.75 -1.5
3,231,774 - AO353_14570 0.87 -0.2
3,231,774 - AO353_14570 0.87 +1.3
3,231,804 - -2.3
3,231,854 - +0.0
3,231,868 + -0.8
3,231,868 + +0.6
3,231,868 + +0.4
3,231,868 + -0.4
3,231,868 + -0.6
3,231,868 + +0.1
3,231,868 + -0.4
3,231,868 + -0.8
3,231,868 + -1.3
3,231,868 + -0.0
3,231,868 + +0.1
3,231,868 + +1.1
3,231,868 + -0.0
3,231,868 + -1.0
3,231,868 + -0.3
3,231,869 - +0.4
3,231,869 - +0.3
3,231,869 - +0.1
3,231,869 - +0.6
3,231,869 - -0.9
3,231,869 - -0.6
3,231,869 - -1.5
3,231,869 - -0.5
3,231,869 - -1.6
3,231,869 - +0.1
3,231,869 - +0.1
3,231,869 - +0.4
3,231,869 - +0.5
3,231,957 + +0.7
3,231,958 - +0.5
3,231,958 - +1.2
3,232,004 + AO353_14575 0.12 +0.4
3,232,005 - AO353_14575 0.12 -0.2
3,232,005 - AO353_14575 0.12 +0.3
3,232,005 - AO353_14575 0.12 +1.7
3,232,020 + AO353_14575 0.13 +0.1
3,232,021 - AO353_14575 0.13 -0.4
3,232,212 + AO353_14575 0.28 +1.2
3,232,213 - AO353_14575 0.28 -1.2
3,232,213 - AO353_14575 0.28 -2.3
3,232,213 - AO353_14575 0.28 +1.7
3,232,218 + AO353_14575 0.28 +0.5
3,232,218 + AO353_14575 0.28 +0.8
3,232,218 + AO353_14575 0.28 -0.6
3,232,218 + AO353_14575 0.28 +1.9
3,232,219 - AO353_14575 0.28 -0.0
3,232,219 - AO353_14575 0.28 -0.0
3,232,219 - AO353_14575 0.28 +0.8
3,232,219 - AO353_14575 0.28 +0.2
3,232,252 + AO353_14575 0.31 +0.8
3,232,252 + AO353_14575 0.31 +0.1
3,232,252 + AO353_14575 0.31 +0.3
3,232,253 - AO353_14575 0.31 -0.5
3,232,253 - AO353_14575 0.31 +0.5
3,232,253 - AO353_14575 0.31 +1.0
3,232,253 - AO353_14575 0.31 +1.1
3,232,253 - AO353_14575 0.31 +0.0
3,232,596 + AO353_14575 0.58 +0.8
3,232,596 + AO353_14575 0.58 +0.4
3,232,596 + AO353_14575 0.58 -0.0
3,232,596 + AO353_14575 0.58 +0.4
3,232,597 - AO353_14575 0.58 -0.7
3,232,597 - AO353_14575 0.58 -1.0
3,232,597 - AO353_14575 0.58 +0.7
3,232,626 + AO353_14575 0.60 +0.2
3,232,626 + AO353_14575 0.60 -0.6
3,232,626 + AO353_14575 0.60 +0.1
3,232,800 + AO353_14575 0.74 -0.0
3,232,801 - AO353_14575 0.74 -1.1
3,232,830 + AO353_14575 0.76 +1.0
3,232,830 + AO353_14575 0.76 -1.5
3,232,830 + AO353_14575 0.76 -0.5
3,232,830 + AO353_14575 0.76 +0.6
3,232,830 + AO353_14575 0.76 -0.4
3,232,830 + AO353_14575 0.76 -0.3

Or see this region's nucleotide sequence