Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10880 and AO353_10885 are separated by 61 nucleotides AO353_10885 and AO353_10890 overlap by 1 nucleotides AO353_10890 and AO353_10895 are separated by 208 nucleotides AO353_10895 and AO353_10900 are separated by 37 nucleotides
AO353_10880: AO353_10880 - methionine ABC transporter substrate-binding protein, at 2,377,001 to 2,377,774
_10880
AO353_10885: AO353_10885 - metal ABC transporter permease, at 2,377,836 to 2,378,510
_10885
AO353_10890: AO353_10890 - methionine ABC transporter ATP-binding protein, at 2,378,510 to 2,379,517
_10890
AO353_10895: AO353_10895 - hypothetical protein, at 2,379,726 to 2,380,439
_10895
AO353_10900: AO353_10900 - hypothetical protein, at 2,380,477 to 2,381,265
_10900
Position (kb)
2378
2379
2380 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2377.540 kb on - strand, within AO353_10880 at 2377.540 kb on - strand, within AO353_10880 at 2377.589 kb on + strand, within AO353_10880 at 2377.589 kb on + strand, within AO353_10880 at 2377.590 kb on - strand, within AO353_10880 at 2377.590 kb on - strand, within AO353_10880 at 2377.590 kb on - strand, within AO353_10880 at 2377.590 kb on - strand, within AO353_10880 at 2377.590 kb on - strand, within AO353_10880 at 2377.590 kb on - strand, within AO353_10880 at 2377.590 kb on - strand, within AO353_10880 at 2377.605 kb on + strand, within AO353_10880 at 2377.605 kb on + strand, within AO353_10880 at 2377.605 kb on + strand, within AO353_10880 at 2377.605 kb on + strand, within AO353_10880 at 2377.605 kb on + strand, within AO353_10880 at 2377.605 kb on + strand, within AO353_10880 at 2377.605 kb on + strand, within AO353_10880 at 2377.606 kb on - strand, within AO353_10880 at 2377.606 kb on - strand, within AO353_10880 at 2377.606 kb on - strand, within AO353_10880 at 2377.606 kb on - strand, within AO353_10880 at 2377.696 kb on + strand, within AO353_10880 at 2377.696 kb on + strand, within AO353_10880 at 2377.697 kb on - strand at 2377.697 kb on - strand at 2377.697 kb on - strand at 2377.764 kb on - strand at 2377.837 kb on + strand at 2377.838 kb on - strand at 2378.011 kb on + strand, within AO353_10885 at 2378.011 kb on + strand, within AO353_10885 at 2378.012 kb on - strand, within AO353_10885 at 2378.024 kb on + strand, within AO353_10885 at 2378.024 kb on + strand, within AO353_10885 at 2378.024 kb on + strand, within AO353_10885 at 2378.024 kb on + strand, within AO353_10885 at 2378.025 kb on - strand, within AO353_10885 at 2378.025 kb on - strand, within AO353_10885 at 2378.054 kb on + strand, within AO353_10885 at 2378.054 kb on + strand, within AO353_10885 at 2378.054 kb on + strand, within AO353_10885 at 2378.055 kb on - strand, within AO353_10885 at 2378.055 kb on - strand, within AO353_10885 at 2378.055 kb on - strand, within AO353_10885 at 2378.055 kb on - strand, within AO353_10885 at 2378.055 kb on - strand, within AO353_10885 at 2378.055 kb on - strand, within AO353_10885 at 2378.199 kb on + strand, within AO353_10885 at 2378.199 kb on + strand, within AO353_10885 at 2378.250 kb on + strand, within AO353_10885 at 2378.251 kb on - strand, within AO353_10885 at 2378.307 kb on - strand, within AO353_10885 at 2378.307 kb on - strand, within AO353_10885 at 2378.332 kb on + strand, within AO353_10885 at 2378.604 kb on + strand at 2378.649 kb on + strand, within AO353_10890 at 2378.649 kb on + strand, within AO353_10890 at 2378.649 kb on + strand, within AO353_10890 at 2378.649 kb on + strand, within AO353_10890 at 2378.649 kb on + strand, within AO353_10890 at 2378.650 kb on - strand, within AO353_10890 at 2378.650 kb on - strand, within AO353_10890 at 2378.650 kb on - strand, within AO353_10890 at 2378.650 kb on - strand, within AO353_10890 at 2378.650 kb on - strand, within AO353_10890 at 2378.650 kb on - strand, within AO353_10890 at 2378.650 kb on - strand, within AO353_10890 at 2378.650 kb on - strand, within AO353_10890 at 2378.694 kb on + strand, within AO353_10890 at 2378.694 kb on + strand, within AO353_10890 at 2378.694 kb on + strand, within AO353_10890 at 2378.694 kb on + strand, within AO353_10890 at 2378.694 kb on + strand, within AO353_10890 at 2378.694 kb on + strand, within AO353_10890 at 2378.694 kb on + strand, within AO353_10890 at 2378.694 kb on + strand, within AO353_10890 at 2378.694 kb on + strand, within AO353_10890 at 2378.694 kb on + strand, within AO353_10890 at 2378.694 kb on + strand, within AO353_10890 at 2378.695 kb on - strand, within AO353_10890 at 2378.695 kb on - strand, within AO353_10890 at 2378.728 kb on + strand, within AO353_10890 at 2379.383 kb on - strand, within AO353_10890 at 2379.417 kb on + strand at 2379.417 kb on + strand at 2379.417 kb on + strand at 2379.417 kb on + strand at 2379.418 kb on - strand at 2379.418 kb on - strand at 2379.419 kb on + strand at 2379.419 kb on + strand at 2379.419 kb on + strand at 2379.419 kb on + strand at 2379.419 kb on + strand at 2379.419 kb on + strand at 2379.419 kb on + strand at 2379.420 kb on - strand at 2379.420 kb on - strand at 2379.420 kb on - strand at 2379.420 kb on - strand at 2379.448 kb on + strand at 2379.448 kb on + strand at 2379.449 kb on - strand at 2379.467 kb on - strand at 2379.486 kb on + strand at 2379.487 kb on - strand at 2379.493 kb on + strand at 2379.519 kb on + strand at 2379.519 kb on + strand at 2379.520 kb on - strand at 2379.520 kb on - strand at 2379.576 kb on + strand at 2379.576 kb on + strand at 2379.576 kb on + strand at 2379.577 kb on - strand at 2379.577 kb on - strand at 2379.577 kb on - strand at 2379.577 kb on - strand at 2379.577 kb on - strand at 2379.577 kb on - strand at 2379.589 kb on + strand at 2379.589 kb on + strand at 2379.590 kb on - strand at 2379.590 kb on - strand at 2379.590 kb on - strand at 2379.599 kb on + strand at 2379.599 kb on + strand at 2379.599 kb on + strand at 2379.607 kb on - strand at 2379.635 kb on + strand at 2379.635 kb on + strand at 2379.636 kb on - strand at 2379.660 kb on + strand at 2379.661 kb on - strand at 2379.661 kb on - strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.694 kb on + strand at 2379.695 kb on - strand at 2379.695 kb on - strand at 2379.695 kb on - strand at 2379.695 kb on - strand at 2379.695 kb on - strand at 2379.695 kb on - strand at 2379.727 kb on + strand at 2379.727 kb on + strand at 2379.728 kb on - strand at 2379.728 kb on - strand at 2379.728 kb on - strand at 2379.728 kb on - strand at 2379.728 kb on - strand at 2379.853 kb on + strand, within AO353_10895 at 2379.854 kb on - strand, within AO353_10895 at 2379.896 kb on - strand, within AO353_10895 at 2379.896 kb on - strand, within AO353_10895 at 2379.896 kb on - strand, within AO353_10895 at 2379.896 kb on - strand, within AO353_10895 at 2380.198 kb on + strand, within AO353_10895 at 2380.198 kb on + strand, within AO353_10895 at 2380.198 kb on + strand, within AO353_10895 at 2380.198 kb on + strand, within AO353_10895 at 2380.198 kb on + strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.199 kb on - strand, within AO353_10895 at 2380.222 kb on + strand, within AO353_10895 at 2380.222 kb on + strand, within AO353_10895 at 2380.222 kb on + strand, within AO353_10895 at 2380.223 kb on - strand, within AO353_10895 at 2380.223 kb on - strand, within AO353_10895 at 2380.390 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 2,377,540 - AO353_10880 0.70 +0.7 2,377,540 - AO353_10880 0.70 +1.5 2,377,589 + AO353_10880 0.76 +0.0 2,377,589 + AO353_10880 0.76 +1.0 2,377,590 - AO353_10880 0.76 -1.5 2,377,590 - AO353_10880 0.76 +1.0 2,377,590 - AO353_10880 0.76 -0.6 2,377,590 - AO353_10880 0.76 -0.2 2,377,590 - AO353_10880 0.76 -0.3 2,377,590 - AO353_10880 0.76 -0.8 2,377,590 - AO353_10880 0.76 -0.1 2,377,605 + AO353_10880 0.78 +0.9 2,377,605 + AO353_10880 0.78 +0.8 2,377,605 + AO353_10880 0.78 -0.2 2,377,605 + AO353_10880 0.78 -1.7 2,377,605 + AO353_10880 0.78 -1.4 2,377,605 + AO353_10880 0.78 -0.3 2,377,605 + AO353_10880 0.78 +0.0 2,377,606 - AO353_10880 0.78 +0.4 2,377,606 - AO353_10880 0.78 -0.9 2,377,606 - AO353_10880 0.78 +0.4 2,377,606 - AO353_10880 0.78 +0.0 2,377,696 + AO353_10880 0.90 -2.3 2,377,696 + AO353_10880 0.90 +0.6 2,377,697 - +1.6 2,377,697 - +0.3 2,377,697 - +0.1 2,377,764 - -0.9 2,377,837 + +2.0 2,377,838 - +0.5 2,378,011 + AO353_10885 0.26 -0.2 2,378,011 + AO353_10885 0.26 -0.4 2,378,012 - AO353_10885 0.26 +0.8 2,378,024 + AO353_10885 0.28 +0.5 2,378,024 + AO353_10885 0.28 -1.3 2,378,024 + AO353_10885 0.28 +1.9 2,378,024 + AO353_10885 0.28 +1.5 2,378,025 - AO353_10885 0.28 +0.6 2,378,025 - AO353_10885 0.28 +1.0 2,378,054 + AO353_10885 0.32 +0.9 2,378,054 + AO353_10885 0.32 +0.6 2,378,054 + AO353_10885 0.32 +1.2 2,378,055 - AO353_10885 0.32 +2.9 2,378,055 - AO353_10885 0.32 +0.3 2,378,055 - AO353_10885 0.32 +0.8 2,378,055 - AO353_10885 0.32 +0.5 2,378,055 - AO353_10885 0.32 +0.8 2,378,055 - AO353_10885 0.32 +1.2 2,378,199 + AO353_10885 0.54 -1.7 2,378,199 + AO353_10885 0.54 +1.5 2,378,250 + AO353_10885 0.61 +0.9 2,378,251 - AO353_10885 0.61 +1.1 2,378,307 - AO353_10885 0.70 +0.7 2,378,307 - AO353_10885 0.70 +0.9 2,378,332 + AO353_10885 0.73 +1.6 2,378,604 + -1.5 2,378,649 + AO353_10890 0.14 +0.8 2,378,649 + AO353_10890 0.14 +1.3 2,378,649 + AO353_10890 0.14 +2.7 2,378,649 + AO353_10890 0.14 +1.5 2,378,649 + AO353_10890 0.14 -0.3 2,378,650 - AO353_10890 0.14 +0.2 2,378,650 - AO353_10890 0.14 +1.3 2,378,650 - AO353_10890 0.14 -0.8 2,378,650 - AO353_10890 0.14 +1.1 2,378,650 - AO353_10890 0.14 -0.4 2,378,650 - AO353_10890 0.14 -1.6 2,378,650 - AO353_10890 0.14 +0.4 2,378,650 - AO353_10890 0.14 +0.9 2,378,694 + AO353_10890 0.18 +0.4 2,378,694 + AO353_10890 0.18 +1.2 2,378,694 + AO353_10890 0.18 +1.7 2,378,694 + AO353_10890 0.18 +1.1 2,378,694 + AO353_10890 0.18 +1.1 2,378,694 + AO353_10890 0.18 -0.8 2,378,694 + AO353_10890 0.18 +2.9 2,378,694 + AO353_10890 0.18 -0.1 2,378,694 + AO353_10890 0.18 +0.4 2,378,694 + AO353_10890 0.18 +0.7 2,378,694 + AO353_10890 0.18 +0.9 2,378,695 - AO353_10890 0.18 +1.4 2,378,695 - AO353_10890 0.18 +1.8 2,378,728 + AO353_10890 0.22 +0.3 2,379,383 - AO353_10890 0.87 +0.1 2,379,417 + +0.0 2,379,417 + +1.4 2,379,417 + +2.0 2,379,417 + -0.4 2,379,418 - +1.4 2,379,418 - +1.7 2,379,419 + -0.6 2,379,419 + +0.2 2,379,419 + +0.4 2,379,419 + -0.3 2,379,419 + +0.4 2,379,419 + +2.7 2,379,419 + +0.5 2,379,420 - -0.8 2,379,420 - -0.1 2,379,420 - +0.5 2,379,420 - -1.3 2,379,448 + +1.2 2,379,448 + +1.3 2,379,449 - +0.8 2,379,467 - +2.0 2,379,486 + +2.1 2,379,487 - +0.5 2,379,493 + +1.1 2,379,519 + +1.3 2,379,519 + +2.7 2,379,520 - -2.2 2,379,520 - +0.2 2,379,576 + +1.6 2,379,576 + +0.4 2,379,576 + -0.1 2,379,577 - +0.6 2,379,577 - -2.3 2,379,577 - -1.3 2,379,577 - +1.4 2,379,577 - -1.1 2,379,577 - +0.1 2,379,589 + +1.4 2,379,589 + +1.1 2,379,590 - -0.8 2,379,590 - +0.4 2,379,590 - -0.1 2,379,599 + +0.8 2,379,599 + -1.0 2,379,599 + +0.8 2,379,607 - -0.4 2,379,635 + +0.3 2,379,635 + -1.3 2,379,636 - +0.2 2,379,660 + -2.8 2,379,661 - -0.1 2,379,661 - -2.3 2,379,694 + +0.1 2,379,694 + -0.1 2,379,694 + +0.2 2,379,694 + +0.4 2,379,694 + +0.8 2,379,694 + -0.5 2,379,694 + +0.6 2,379,694 + -1.6 2,379,694 + +0.5 2,379,694 + +1.2 2,379,694 + -1.8 2,379,694 + +2.8 2,379,695 - -1.3 2,379,695 - +1.7 2,379,695 - -0.3 2,379,695 - -0.6 2,379,695 - -1.2 2,379,695 - +1.4 2,379,727 + -0.5 2,379,727 + +0.1 2,379,728 - +0.3 2,379,728 - -0.5 2,379,728 - +0.2 2,379,728 - +0.6 2,379,728 - +1.3 2,379,853 + AO353_10895 0.18 -1.6 2,379,854 - AO353_10895 0.18 -2.3 2,379,896 - AO353_10895 0.24 -0.7 2,379,896 - AO353_10895 0.24 -1.4 2,379,896 - AO353_10895 0.24 +0.7 2,379,896 - AO353_10895 0.24 -0.5 2,380,198 + AO353_10895 0.66 +0.1 2,380,198 + AO353_10895 0.66 -0.6 2,380,198 + AO353_10895 0.66 +0.8 2,380,198 + AO353_10895 0.66 +1.0 2,380,198 + AO353_10895 0.66 -1.6 2,380,199 - AO353_10895 0.66 +0.4 2,380,199 - AO353_10895 0.66 -0.3 2,380,199 - AO353_10895 0.66 -1.2 2,380,199 - AO353_10895 0.66 +0.4 2,380,199 - AO353_10895 0.66 -0.7 2,380,199 - AO353_10895 0.66 -0.6 2,380,222 + AO353_10895 0.69 +0.1 2,380,222 + AO353_10895 0.69 -0.2 2,380,222 + AO353_10895 0.69 -0.4 2,380,223 - AO353_10895 0.70 -2.5 2,380,223 - AO353_10895 0.70 -0.5 2,380,390 - +0.1
Or see this region's nucleotide sequence