Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_10610 and AO353_10615 are separated by 71 nucleotides AO353_10615 and AO353_10620 are separated by 16 nucleotides AO353_10620 and AO353_10625 are separated by 178 nucleotides
AO353_10610: AO353_10610 - lipid A biosynthesis lauroyl acyltransferase, at 2,327,492 to 2,328,379
_10610
AO353_10615: AO353_10615 - pilus assembly protein PilZ, at 2,328,451 to 2,328,690
_10615
AO353_10620: AO353_10620 - hypothetical protein, at 2,328,707 to 2,329,021
_10620
AO353_10625: AO353_10625 - potassium transporter peripheral membrane component, at 2,329,200 to 2,330,573
_10625
Position (kb)
2328
2329
2330 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2328.375 kb on - strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.465 kb on + strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.466 kb on - strand at 2328.547 kb on + strand, within AO353_10615 at 2328.547 kb on + strand, within AO353_10615 at 2328.548 kb on - strand, within AO353_10615 at 2328.548 kb on - strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.595 kb on + strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.596 kb on - strand, within AO353_10615 at 2328.683 kb on - strand at 2328.683 kb on - strand at 2328.725 kb on + strand at 2328.726 kb on - strand at 2328.726 kb on - strand at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.843 kb on + strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.844 kb on - strand, within AO353_10620 at 2328.876 kb on + strand, within AO353_10620 at 2328.876 kb on + strand, within AO353_10620 at 2328.876 kb on + strand, within AO353_10620 at 2328.876 kb on + strand, within AO353_10620 at 2328.945 kb on + strand, within AO353_10620 at 2328.946 kb on - strand, within AO353_10620 at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.023 kb on + strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.024 kb on - strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.131 kb on + strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.132 kb on - strand at 2329.247 kb on + strand at 2329.247 kb on + strand at 2329.247 kb on + strand at 2329.247 kb on + strand at 2329.247 kb on + strand at 2329.248 kb on - strand at 2329.248 kb on - strand at 2329.248 kb on - strand at 2329.248 kb on - strand at 2329.257 kb on - strand at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.349 kb on + strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.350 kb on - strand, within AO353_10625 at 2329.352 kb on + strand, within AO353_10625 at 2329.352 kb on + strand, within AO353_10625 at 2329.352 kb on + strand, within AO353_10625 at 2329.352 kb on + strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.353 kb on - strand, within AO353_10625 at 2329.509 kb on - strand, within AO353_10625 at 2329.547 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.573 kb on + strand, within AO353_10625 at 2329.574 kb on - strand, within AO353_10625 at 2329.574 kb on - strand, within AO353_10625 at 2329.695 kb on - strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.710 kb on + strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.711 kb on - strand, within AO353_10625 at 2329.771 kb on + strand, within AO353_10625 at 2329.771 kb on + strand, within AO353_10625 at 2329.814 kb on - strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.882 kb on + strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.883 kb on - strand, within AO353_10625 at 2329.944 kb on - strand, within AO353_10625
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 2,328,375 - +0.1 2,328,465 + +0.4 2,328,465 + +1.4 2,328,465 + +0.7 2,328,465 + +0.9 2,328,465 + -1.0 2,328,465 + +1.1 2,328,465 + +1.6 2,328,465 + -1.5 2,328,465 + +1.8 2,328,465 + -0.5 2,328,465 + -1.1 2,328,466 - +0.0 2,328,466 - +1.1 2,328,466 - +1.0 2,328,466 - -0.7 2,328,466 - +1.3 2,328,466 - +0.7 2,328,466 - -0.2 2,328,547 + AO353_10615 0.40 +0.1 2,328,547 + AO353_10615 0.40 -1.6 2,328,548 - AO353_10615 0.40 -0.8 2,328,548 - AO353_10615 0.40 +0.3 2,328,595 + AO353_10615 0.60 -0.1 2,328,595 + AO353_10615 0.60 -0.3 2,328,595 + AO353_10615 0.60 -0.1 2,328,595 + AO353_10615 0.60 -1.1 2,328,595 + AO353_10615 0.60 +0.3 2,328,595 + AO353_10615 0.60 +1.0 2,328,596 - AO353_10615 0.60 -0.7 2,328,596 - AO353_10615 0.60 -0.3 2,328,596 - AO353_10615 0.60 -0.9 2,328,596 - AO353_10615 0.60 -1.2 2,328,596 - AO353_10615 0.60 -0.8 2,328,596 - AO353_10615 0.60 -0.5 2,328,683 - -0.2 2,328,683 - +0.3 2,328,725 + +1.3 2,328,726 - -0.2 2,328,726 - +0.9 2,328,843 + AO353_10620 0.43 -0.1 2,328,843 + AO353_10620 0.43 +0.6 2,328,843 + AO353_10620 0.43 +0.5 2,328,843 + AO353_10620 0.43 +1.2 2,328,843 + AO353_10620 0.43 +2.1 2,328,843 + AO353_10620 0.43 -0.1 2,328,843 + AO353_10620 0.43 -1.3 2,328,843 + AO353_10620 0.43 -2.0 2,328,843 + AO353_10620 0.43 +0.8 2,328,844 - AO353_10620 0.43 -1.1 2,328,844 - AO353_10620 0.43 +1.5 2,328,844 - AO353_10620 0.43 +0.3 2,328,844 - AO353_10620 0.43 -0.6 2,328,844 - AO353_10620 0.43 +1.4 2,328,844 - AO353_10620 0.43 -0.2 2,328,876 + AO353_10620 0.54 +3.1 2,328,876 + AO353_10620 0.54 +0.5 2,328,876 + AO353_10620 0.54 +0.5 2,328,876 + AO353_10620 0.54 -1.9 2,328,945 + AO353_10620 0.76 -0.5 2,328,946 - AO353_10620 0.76 +1.7 2,329,023 + +2.4 2,329,023 + +1.5 2,329,023 + +0.7 2,329,023 + -0.9 2,329,023 + +0.9 2,329,023 + -1.0 2,329,023 + +0.9 2,329,023 + -0.2 2,329,023 + -0.3 2,329,023 + +0.1 2,329,023 + +0.4 2,329,024 - -2.0 2,329,024 - +1.1 2,329,024 - -2.0 2,329,024 - +0.0 2,329,024 - -1.8 2,329,024 - +0.2 2,329,024 - -0.2 2,329,024 - -1.4 2,329,024 - +0.2 2,329,024 - -0.5 2,329,024 - -0.1 2,329,024 - -0.5 2,329,024 - -1.3 2,329,024 - +1.5 2,329,024 - +0.9 2,329,131 + -0.5 2,329,131 + +0.5 2,329,131 + +1.3 2,329,131 + -0.9 2,329,131 + +0.8 2,329,131 + +1.3 2,329,131 + +0.1 2,329,131 + +0.1 2,329,131 + -0.1 2,329,131 + +1.1 2,329,131 + -1.5 2,329,131 + -1.3 2,329,131 + +0.9 2,329,131 + +2.0 2,329,131 + +1.6 2,329,131 + -0.0 2,329,131 + -0.6 2,329,131 + +0.7 2,329,131 + +0.1 2,329,131 + -0.6 2,329,131 + -0.3 2,329,131 + -1.4 2,329,132 - -1.7 2,329,132 - -1.5 2,329,132 - -0.1 2,329,132 - +0.8 2,329,132 - -1.5 2,329,132 - -0.9 2,329,132 - -0.7 2,329,132 - -1.8 2,329,132 - +0.1 2,329,132 - +1.5 2,329,132 - -0.3 2,329,132 - -0.2 2,329,132 - -0.1 2,329,132 - +0.8 2,329,132 - -1.0 2,329,132 - +1.1 2,329,132 - -2.1 2,329,132 - -1.2 2,329,132 - +0.9 2,329,132 - -0.8 2,329,132 - +0.4 2,329,132 - +1.1 2,329,132 - -0.6 2,329,132 - -0.2 2,329,132 - -2.0 2,329,132 - -0.5 2,329,132 - +0.0 2,329,132 - -0.6 2,329,132 - -0.6 2,329,247 + -1.1 2,329,247 + +0.6 2,329,247 + -0.1 2,329,247 + +0.9 2,329,247 + -1.8 2,329,248 - -1.0 2,329,248 - -0.3 2,329,248 - -0.7 2,329,248 - +2.1 2,329,257 - +1.3 2,329,349 + AO353_10625 0.11 -0.4 2,329,349 + AO353_10625 0.11 -1.7 2,329,349 + AO353_10625 0.11 -1.0 2,329,349 + AO353_10625 0.11 +2.7 2,329,349 + AO353_10625 0.11 -0.1 2,329,349 + AO353_10625 0.11 -2.0 2,329,349 + AO353_10625 0.11 +0.1 2,329,349 + AO353_10625 0.11 -0.0 2,329,349 + AO353_10625 0.11 +0.4 2,329,349 + AO353_10625 0.11 +0.3 2,329,349 + AO353_10625 0.11 +0.6 2,329,349 + AO353_10625 0.11 +0.8 2,329,349 + AO353_10625 0.11 -1.2 2,329,350 - AO353_10625 0.11 +2.3 2,329,350 - AO353_10625 0.11 +1.3 2,329,350 - AO353_10625 0.11 +0.1 2,329,350 - AO353_10625 0.11 +0.1 2,329,350 - AO353_10625 0.11 -0.4 2,329,350 - AO353_10625 0.11 -0.7 2,329,350 - AO353_10625 0.11 +0.6 2,329,350 - AO353_10625 0.11 -0.5 2,329,352 + AO353_10625 0.11 +0.5 2,329,352 + AO353_10625 0.11 +0.1 2,329,352 + AO353_10625 0.11 +0.0 2,329,352 + AO353_10625 0.11 +1.3 2,329,353 - AO353_10625 0.11 +2.7 2,329,353 - AO353_10625 0.11 +0.5 2,329,353 - AO353_10625 0.11 +0.7 2,329,353 - AO353_10625 0.11 -0.7 2,329,353 - AO353_10625 0.11 +0.1 2,329,353 - AO353_10625 0.11 -1.2 2,329,353 - AO353_10625 0.11 +1.1 2,329,353 - AO353_10625 0.11 -0.5 2,329,509 - AO353_10625 0.22 +0.5 2,329,547 + AO353_10625 0.25 +0.4 2,329,573 + AO353_10625 0.27 -1.4 2,329,573 + AO353_10625 0.27 +1.1 2,329,573 + AO353_10625 0.27 -0.1 2,329,573 + AO353_10625 0.27 +0.7 2,329,573 + AO353_10625 0.27 -0.2 2,329,573 + AO353_10625 0.27 +0.5 2,329,573 + AO353_10625 0.27 -0.9 2,329,573 + AO353_10625 0.27 -1.2 2,329,573 + AO353_10625 0.27 -1.6 2,329,573 + AO353_10625 0.27 -2.3 2,329,574 - AO353_10625 0.27 -0.5 2,329,574 - AO353_10625 0.27 +1.5 2,329,695 - AO353_10625 0.36 -0.8 2,329,710 + AO353_10625 0.37 +1.4 2,329,710 + AO353_10625 0.37 +2.5 2,329,710 + AO353_10625 0.37 +0.6 2,329,710 + AO353_10625 0.37 +0.6 2,329,710 + AO353_10625 0.37 +0.3 2,329,710 + AO353_10625 0.37 +0.3 2,329,710 + AO353_10625 0.37 -0.2 2,329,710 + AO353_10625 0.37 -1.0 2,329,710 + AO353_10625 0.37 +1.7 2,329,710 + AO353_10625 0.37 +1.1 2,329,710 + AO353_10625 0.37 -0.5 2,329,711 - AO353_10625 0.37 -1.5 2,329,711 - AO353_10625 0.37 +0.5 2,329,711 - AO353_10625 0.37 +0.0 2,329,711 - AO353_10625 0.37 +1.1 2,329,711 - AO353_10625 0.37 -0.4 2,329,711 - AO353_10625 0.37 +1.0 2,329,771 + AO353_10625 0.42 -0.5 2,329,771 + AO353_10625 0.42 +0.6 2,329,814 - AO353_10625 0.45 +0.7 2,329,882 + AO353_10625 0.50 +0.0 2,329,882 + AO353_10625 0.50 +0.4 2,329,882 + AO353_10625 0.50 +0.4 2,329,882 + AO353_10625 0.50 -1.0 2,329,882 + AO353_10625 0.50 -0.6 2,329,882 + AO353_10625 0.50 -1.8 2,329,882 + AO353_10625 0.50 -1.7 2,329,882 + AO353_10625 0.50 -0.3 2,329,882 + AO353_10625 0.50 +1.8 2,329,882 + AO353_10625 0.50 -0.6 2,329,882 + AO353_10625 0.50 +1.9 2,329,882 + AO353_10625 0.50 +0.1 2,329,882 + AO353_10625 0.50 +3.3 2,329,883 - AO353_10625 0.50 -1.0 2,329,883 - AO353_10625 0.50 +0.6 2,329,883 - AO353_10625 0.50 -2.6 2,329,883 - AO353_10625 0.50 -0.7 2,329,883 - AO353_10625 0.50 +0.2 2,329,883 - AO353_10625 0.50 +0.1 2,329,944 - AO353_10625 0.54 +0.3
Or see this region's nucleotide sequence