Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_07360 and AO353_07365 are separated by 74 nucleotides AO353_07365 and AO353_07370 are separated by 36 nucleotides AO353_07370 and AO353_07375 are separated by 199 nucleotides AO353_07375 and AO353_07380 are separated by 489 nucleotides
AO353_07360: AO353_07360 - dihydroneopterin aldolase, at 1,617,496 to 1,617,849
_07360
AO353_07365: AO353_07365 - glycerol-3-phosphate acyltransferase, at 1,617,924 to 1,618,493
_07365
AO353_07370: AO353_07370 - tRNA threonylcarbamoyl adenosine modification protein TsaD, at 1,618,530 to 1,619,555
_07370
AO353_07375: AO353_07375 - 30S ribosomal protein S21, at 1,619,755 to 1,619,970
_07375
AO353_07380: AO353_07380 - DNA primase, at 1,620,460 to 1,622,421
_07380
Position (kb)
1618
1619
1620 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1617.916 kb on + strand at 1617.916 kb on + strand at 1617.916 kb on + strand at 1617.916 kb on + strand at 1617.916 kb on + strand at 1617.916 kb on + strand at 1617.917 kb on - strand at 1617.917 kb on - strand at 1617.917 kb on - strand at 1617.917 kb on - strand at 1617.917 kb on - strand at 1617.917 kb on - strand at 1617.917 kb on - strand at 1617.917 kb on - strand at 1617.920 kb on + strand at 1617.920 kb on + strand at 1617.920 kb on + strand at 1617.920 kb on + strand at 1617.920 kb on + strand at 1617.920 kb on + strand at 1617.920 kb on + strand at 1617.921 kb on - strand at 1617.921 kb on - strand at 1617.921 kb on - strand at 1617.921 kb on - strand at 1617.921 kb on - strand at 1617.921 kb on - strand at 1617.921 kb on - strand at 1617.951 kb on + strand at 1617.951 kb on + strand at 1618.054 kb on + strand, within AO353_07365 at 1618.055 kb on - strand, within AO353_07365 at 1618.179 kb on + strand, within AO353_07365 at 1618.179 kb on + strand, within AO353_07365 at 1618.180 kb on - strand, within AO353_07365 at 1618.180 kb on - strand, within AO353_07365 at 1618.201 kb on - strand, within AO353_07365 at 1618.209 kb on + strand, within AO353_07365 at 1618.209 kb on + strand, within AO353_07365 at 1618.210 kb on - strand, within AO353_07365 at 1618.210 kb on - strand, within AO353_07365 at 1618.210 kb on - strand, within AO353_07365 at 1618.210 kb on - strand, within AO353_07365 at 1618.210 kb on - strand, within AO353_07365 at 1618.270 kb on - strand, within AO353_07365 at 1618.306 kb on + strand, within AO353_07365 at 1618.317 kb on + strand, within AO353_07365 at 1618.317 kb on + strand, within AO353_07365 at 1618.317 kb on + strand, within AO353_07365 at 1618.317 kb on + strand, within AO353_07365 at 1618.317 kb on + strand, within AO353_07365 at 1618.317 kb on + strand, within AO353_07365 at 1618.318 kb on - strand, within AO353_07365 at 1618.318 kb on - strand, within AO353_07365 at 1618.318 kb on - strand, within AO353_07365 at 1618.318 kb on - strand, within AO353_07365 at 1618.318 kb on - strand, within AO353_07365 at 1618.318 kb on - strand, within AO353_07365 at 1618.456 kb on + strand at 1618.456 kb on + strand at 1618.457 kb on - strand at 1618.457 kb on - strand at 1618.457 kb on - strand at 1618.457 kb on - strand at 1618.457 kb on - strand at 1618.457 kb on - strand at 1618.491 kb on + strand at 1618.491 kb on + strand at 1618.491 kb on + strand at 1618.495 kb on + strand at 1618.495 kb on + strand at 1618.495 kb on + strand at 1618.495 kb on + strand at 1618.495 kb on + strand at 1618.495 kb on + strand at 1618.496 kb on - strand at 1618.508 kb on + strand at 1618.531 kb on + strand at 1618.531 kb on + strand at 1618.531 kb on + strand at 1618.532 kb on - strand at 1618.532 kb on - strand at 1618.532 kb on - strand at 1619.599 kb on - strand at 1619.599 kb on - strand at 1620.022 kb on + strand at 1620.022 kb on + strand at 1620.022 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.226 kb on + strand at 1620.233 kb on + strand at 1620.304 kb on + strand at 1620.304 kb on + strand at 1620.328 kb on + strand at 1620.328 kb on + strand at 1620.328 kb on + strand at 1620.328 kb on + strand at 1620.358 kb on + strand at 1620.358 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand at 1620.394 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 1,617,916 + -3.0 1,617,916 + +0.9 1,617,916 + -1.6 1,617,916 + -1.7 1,617,916 + -1.5 1,617,916 + -1.4 1,617,917 - +1.0 1,617,917 - -1.0 1,617,917 - +2.8 1,617,917 - +1.0 1,617,917 - +2.0 1,617,917 - +3.0 1,617,917 - +1.2 1,617,917 - +1.6 1,617,920 + -1.5 1,617,920 + -1.6 1,617,920 + -1.8 1,617,920 + -1.7 1,617,920 + -1.7 1,617,920 + -1.9 1,617,920 + -1.8 1,617,921 - +1.3 1,617,921 - +1.7 1,617,921 - +2.7 1,617,921 - +1.2 1,617,921 - +2.0 1,617,921 - +0.9 1,617,921 - -0.0 1,617,951 + -2.6 1,617,951 + -0.7 1,618,054 + AO353_07365 0.23 -2.4 1,618,055 - AO353_07365 0.23 +1.6 1,618,179 + AO353_07365 0.45 -0.5 1,618,179 + AO353_07365 0.45 -3.0 1,618,180 - AO353_07365 0.45 +0.1 1,618,180 - AO353_07365 0.45 +2.1 1,618,201 - AO353_07365 0.49 +1.5 1,618,209 + AO353_07365 0.50 -1.2 1,618,209 + AO353_07365 0.50 -3.3 1,618,210 - AO353_07365 0.50 +1.2 1,618,210 - AO353_07365 0.50 +1.1 1,618,210 - AO353_07365 0.50 +2.9 1,618,210 - AO353_07365 0.50 +1.3 1,618,210 - AO353_07365 0.50 +1.0 1,618,270 - AO353_07365 0.61 +2.5 1,618,306 + AO353_07365 0.67 -2.4 1,618,317 + AO353_07365 0.69 -0.5 1,618,317 + AO353_07365 0.69 -2.8 1,618,317 + AO353_07365 0.69 -1.8 1,618,317 + AO353_07365 0.69 -1.7 1,618,317 + AO353_07365 0.69 -1.3 1,618,317 + AO353_07365 0.69 -1.3 1,618,318 - AO353_07365 0.69 +1.5 1,618,318 - AO353_07365 0.69 +1.8 1,618,318 - AO353_07365 0.69 +1.9 1,618,318 - AO353_07365 0.69 +3.0 1,618,318 - AO353_07365 0.69 -1.5 1,618,318 - AO353_07365 0.69 +2.8 1,618,456 + -2.6 1,618,456 + -1.7 1,618,457 - +1.1 1,618,457 - +1.0 1,618,457 - -1.0 1,618,457 - +1.9 1,618,457 - -0.7 1,618,457 - +1.8 1,618,491 + -2.5 1,618,491 + -0.5 1,618,491 + -2.5 1,618,495 + -0.9 1,618,495 + -0.1 1,618,495 + -1.4 1,618,495 + -1.7 1,618,495 + -1.6 1,618,495 + -0.7 1,618,496 - +2.0 1,618,508 + -3.0 1,618,531 + -0.7 1,618,531 + -0.9 1,618,531 + -1.1 1,618,532 - +3.6 1,618,532 - +1.4 1,618,532 - +2.8 1,619,599 - -0.8 1,619,599 - -1.2 1,620,022 + -0.8 1,620,022 + -0.2 1,620,022 + +0.2 1,620,226 + +0.0 1,620,226 + -0.5 1,620,226 + +1.0 1,620,226 + -0.4 1,620,226 + -0.2 1,620,226 + +1.2 1,620,226 + -0.8 1,620,226 + -1.3 1,620,233 + +0.6 1,620,304 + +1.0 1,620,304 + -0.8 1,620,328 + -1.2 1,620,328 + -0.7 1,620,328 + +0.3 1,620,328 + -0.7 1,620,358 + -1.6 1,620,358 + +0.5 1,620,394 + -1.4 1,620,394 + -0.6 1,620,394 + -2.1 1,620,394 + -0.8 1,620,394 + -1.5 1,620,394 + +1.0 1,620,394 + +0.2 1,620,394 + +0.0
Or see this region's nucleotide sequence