Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_04395 and AO353_04400 are separated by 12 nucleotides AO353_04400 and AO353_04405 are separated by 71 nucleotides
AO353_04395: AO353_04395 - cytochrome C assembly protein, at 946,606 to 947,418
_04395
AO353_04400: AO353_04400 - transporter, at 947,431 to 948,696
_04400
AO353_04405: AO353_04405 - MFS transporter, at 948,768 to 950,084
_04405
Position (kb) 947
948
949 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 946.432 kb on - strand at 946.497 kb on - strand at 946.497 kb on - strand at 946.497 kb on - strand at 946.564 kb on + strand at 946.564 kb on + strand at 946.564 kb on + strand at 946.564 kb on + strand at 946.565 kb on - strand at 946.565 kb on - strand at 946.596 kb on - strand at 946.605 kb on + strand at 946.605 kb on + strand at 946.605 kb on + strand at 946.605 kb on + strand at 946.605 kb on + strand at 946.605 kb on + strand at 946.606 kb on - strand at 946.606 kb on - strand at 946.606 kb on - strand at 946.606 kb on - strand at 946.606 kb on - strand at 946.606 kb on - strand at 946.606 kb on - strand at 946.606 kb on - strand at 946.606 kb on - strand at 946.655 kb on + strand at 946.655 kb on + strand at 946.655 kb on + strand at 946.656 kb on - strand at 946.656 kb on - strand at 946.656 kb on - strand at 946.656 kb on - strand at 946.656 kb on - strand at 946.656 kb on - strand at 946.656 kb on - strand at 946.657 kb on + strand at 946.658 kb on - strand at 946.658 kb on - strand at 946.658 kb on - strand at 946.658 kb on - strand at 946.658 kb on - strand at 946.658 kb on - strand at 946.675 kb on + strand at 946.998 kb on + strand, within AO353_04395 at 947.374 kb on + strand at 947.437 kb on - strand at 947.448 kb on - strand at 947.448 kb on - strand at 947.448 kb on - strand at 947.528 kb on + strand at 947.528 kb on + strand at 947.528 kb on + strand at 947.528 kb on + strand at 947.528 kb on + strand at 947.528 kb on + strand at 947.528 kb on + strand at 947.528 kb on + strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.529 kb on - strand at 947.613 kb on + strand, within AO353_04400 at 947.614 kb on - strand, within AO353_04400 at 947.636 kb on + strand, within AO353_04400 at 947.723 kb on + strand, within AO353_04400 at 947.724 kb on - strand, within AO353_04400 at 947.724 kb on - strand, within AO353_04400 at 947.724 kb on - strand, within AO353_04400 at 947.724 kb on - strand, within AO353_04400 at 947.724 kb on - strand, within AO353_04400 at 947.735 kb on - strand, within AO353_04400 at 947.816 kb on + strand, within AO353_04400 at 947.817 kb on - strand, within AO353_04400 at 947.822 kb on - strand, within AO353_04400 at 948.156 kb on + strand, within AO353_04400 at 948.232 kb on + strand, within AO353_04400 at 948.232 kb on + strand, within AO353_04400 at 948.232 kb on + strand, within AO353_04400 at 948.232 kb on + strand, within AO353_04400 at 948.232 kb on + strand, within AO353_04400 at 948.232 kb on + strand, within AO353_04400 at 948.232 kb on + strand, within AO353_04400 at 948.233 kb on - strand, within AO353_04400 at 948.233 kb on - strand, within AO353_04400 at 948.233 kb on - strand, within AO353_04400 at 948.233 kb on - strand, within AO353_04400 at 948.233 kb on - strand, within AO353_04400 at 948.233 kb on - strand, within AO353_04400 at 948.233 kb on - strand, within AO353_04400 at 948.233 kb on - strand, within AO353_04400 at 948.233 kb on - strand, within AO353_04400 at 948.233 kb on - strand, within AO353_04400 at 948.233 kb on - strand, within AO353_04400 at 948.319 kb on + strand, within AO353_04400 at 948.319 kb on + strand, within AO353_04400 at 948.319 kb on + strand, within AO353_04400 at 948.320 kb on - strand, within AO353_04400 at 948.329 kb on + strand, within AO353_04400 at 948.329 kb on + strand, within AO353_04400 at 948.329 kb on + strand, within AO353_04400 at 948.330 kb on - strand, within AO353_04400 at 948.330 kb on - strand, within AO353_04400 at 948.330 kb on - strand, within AO353_04400 at 948.330 kb on - strand, within AO353_04400 at 948.330 kb on - strand, within AO353_04400 at 948.330 kb on - strand, within AO353_04400 at 948.647 kb on + strand at 948.648 kb on - strand at 948.695 kb on - strand at 948.695 kb on - strand at 948.695 kb on - strand at 948.724 kb on - strand at 948.726 kb on + strand at 948.726 kb on + strand at 948.726 kb on + strand at 948.726 kb on + strand at 948.727 kb on - strand at 948.727 kb on - strand at 948.727 kb on - strand at 948.727 kb on - strand at 948.727 kb on - strand at 948.727 kb on - strand at 948.773 kb on + strand at 948.773 kb on + strand at 948.774 kb on - strand at 948.786 kb on + strand at 948.786 kb on + strand at 948.786 kb on + strand at 948.786 kb on + strand at 948.787 kb on - strand at 948.787 kb on - strand at 948.787 kb on - strand at 948.870 kb on + strand at 948.871 kb on - strand at 948.871 kb on - strand at 948.871 kb on - strand at 948.879 kb on + strand at 948.879 kb on + strand at 948.879 kb on + strand at 948.879 kb on + strand at 948.879 kb on + strand at 948.879 kb on + strand at 948.879 kb on + strand at 948.879 kb on + strand at 948.879 kb on + strand at 948.880 kb on - strand at 948.880 kb on - strand at 948.880 kb on - strand at 948.880 kb on - strand at 948.880 kb on - strand at 948.880 kb on - strand at 948.880 kb on - strand at 948.880 kb on - strand at 948.880 kb on - strand at 948.880 kb on - strand at 948.885 kb on + strand at 949.000 kb on + strand, within AO353_04405 at 949.001 kb on - strand, within AO353_04405 at 949.001 kb on - strand, within AO353_04405 at 949.114 kb on - strand, within AO353_04405 at 949.153 kb on + strand, within AO353_04405 at 949.153 kb on + strand, within AO353_04405 at 949.154 kb on - strand, within AO353_04405 at 949.154 kb on - strand, within AO353_04405 at 949.278 kb on - strand, within AO353_04405 at 949.404 kb on + strand, within AO353_04405 at 949.404 kb on + strand, within AO353_04405 at 949.404 kb on + strand, within AO353_04405 at 949.404 kb on + strand, within AO353_04405 at 949.405 kb on - strand, within AO353_04405 at 949.501 kb on - strand, within AO353_04405 at 949.558 kb on - strand, within AO353_04405 at 949.558 kb on - strand, within AO353_04405 at 949.558 kb on - strand, within AO353_04405 at 949.584 kb on + strand, within AO353_04405 at 949.584 kb on + strand, within AO353_04405 at 949.584 kb on + strand, within AO353_04405 at 949.585 kb on - strand, within AO353_04405 at 949.585 kb on - strand, within AO353_04405 at 949.585 kb on - strand, within AO353_04405 at 949.606 kb on - strand, within AO353_04405 at 949.606 kb on - strand, within AO353_04405
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 946,432 - -0.2 946,497 - +0.7 946,497 - -0.0 946,497 - -1.1 946,564 + +2.2 946,564 + +1.0 946,564 + +0.1 946,564 + +1.1 946,565 - +0.3 946,565 - +1.9 946,596 - +1.3 946,605 + +1.6 946,605 + +0.1 946,605 + +0.9 946,605 + +1.9 946,605 + +0.5 946,605 + +0.8 946,606 - +3.3 946,606 - +1.4 946,606 - +1.4 946,606 - +1.5 946,606 - +2.6 946,606 - +0.6 946,606 - +1.3 946,606 - +2.6 946,606 - +0.4 946,655 + +1.9 946,655 + +0.5 946,655 + +1.3 946,656 - +0.9 946,656 - +1.1 946,656 - +2.1 946,656 - +1.4 946,656 - +1.9 946,656 - -0.1 946,656 - +1.5 946,657 + +2.6 946,658 - +1.4 946,658 - +1.9 946,658 - +1.3 946,658 - -0.6 946,658 - +1.3 946,658 - +0.7 946,675 + +1.6 946,998 + AO353_04395 0.48 -0.1 947,374 + +0.6 947,437 - +1.9 947,448 - -0.5 947,448 - -0.5 947,448 - +3.2 947,528 + +1.3 947,528 + +0.6 947,528 + +0.3 947,528 + +0.5 947,528 + +1.4 947,528 + +0.5 947,528 + +1.0 947,528 + +1.3 947,529 - +1.9 947,529 - +1.6 947,529 - +0.6 947,529 - +0.9 947,529 - +0.1 947,529 - +1.3 947,529 - +1.1 947,529 - +0.6 947,529 - +0.1 947,529 - +1.1 947,529 - +0.7 947,529 - +1.1 947,529 - +1.8 947,529 - +1.8 947,529 - +1.3 947,529 - +3.3 947,529 - -0.5 947,529 - +0.4 947,529 - +1.3 947,529 - +2.0 947,613 + AO353_04400 0.14 +1.7 947,614 - AO353_04400 0.14 +1.3 947,636 + AO353_04400 0.16 +0.6 947,723 + AO353_04400 0.23 +0.6 947,724 - AO353_04400 0.23 +1.0 947,724 - AO353_04400 0.23 +0.5 947,724 - AO353_04400 0.23 +1.3 947,724 - AO353_04400 0.23 +0.9 947,724 - AO353_04400 0.23 +1.3 947,735 - AO353_04400 0.24 +1.0 947,816 + AO353_04400 0.30 +1.4 947,817 - AO353_04400 0.30 +0.6 947,822 - AO353_04400 0.31 +1.0 948,156 + AO353_04400 0.57 +0.3 948,232 + AO353_04400 0.63 +1.3 948,232 + AO353_04400 0.63 +0.4 948,232 + AO353_04400 0.63 -0.9 948,232 + AO353_04400 0.63 +0.3 948,232 + AO353_04400 0.63 +1.9 948,232 + AO353_04400 0.63 -0.6 948,232 + AO353_04400 0.63 +0.4 948,233 - AO353_04400 0.63 +1.3 948,233 - AO353_04400 0.63 -0.8 948,233 - AO353_04400 0.63 +0.6 948,233 - AO353_04400 0.63 +1.0 948,233 - AO353_04400 0.63 +1.5 948,233 - AO353_04400 0.63 +0.3 948,233 - AO353_04400 0.63 -1.1 948,233 - AO353_04400 0.63 +0.7 948,233 - AO353_04400 0.63 +1.5 948,233 - AO353_04400 0.63 +0.8 948,233 - AO353_04400 0.63 -0.5 948,319 + AO353_04400 0.70 +0.6 948,319 + AO353_04400 0.70 +0.2 948,319 + AO353_04400 0.70 +0.6 948,320 - AO353_04400 0.70 +0.6 948,329 + AO353_04400 0.71 +1.7 948,329 + AO353_04400 0.71 +0.3 948,329 + AO353_04400 0.71 -1.6 948,330 - AO353_04400 0.71 -1.7 948,330 - AO353_04400 0.71 +2.2 948,330 - AO353_04400 0.71 +0.3 948,330 - AO353_04400 0.71 -0.6 948,330 - AO353_04400 0.71 +1.3 948,330 - AO353_04400 0.71 +0.4 948,647 + +1.5 948,648 - +0.0 948,695 - +0.9 948,695 - +0.1 948,695 - +0.0 948,724 - -0.0 948,726 + -1.1 948,726 + +0.7 948,726 + +0.5 948,726 + -0.3 948,727 - +2.5 948,727 - -2.0 948,727 - +0.3 948,727 - +0.3 948,727 - +0.5 948,727 - +0.4 948,773 + +0.3 948,773 + +0.2 948,774 - +0.7 948,786 + +0.6 948,786 + -0.3 948,786 + +0.3 948,786 + +0.3 948,787 - +0.5 948,787 - +0.9 948,787 - +1.5 948,870 + -0.7 948,871 - +2.3 948,871 - +1.5 948,871 - +0.5 948,879 + +0.1 948,879 + +0.8 948,879 + +0.1 948,879 + +0.4 948,879 + +1.2 948,879 + +1.3 948,879 + +0.1 948,879 + +1.0 948,879 + -0.1 948,880 - +0.5 948,880 - +1.2 948,880 - -0.8 948,880 - -1.4 948,880 - +1.0 948,880 - -0.5 948,880 - -0.2 948,880 - -0.5 948,880 - +0.2 948,880 - +0.8 948,885 + +0.1 949,000 + AO353_04405 0.18 +0.7 949,001 - AO353_04405 0.18 +1.3 949,001 - AO353_04405 0.18 +1.1 949,114 - AO353_04405 0.26 -1.3 949,153 + AO353_04405 0.29 +0.1 949,153 + AO353_04405 0.29 -1.2 949,154 - AO353_04405 0.29 +0.3 949,154 - AO353_04405 0.29 -1.1 949,278 - AO353_04405 0.39 -1.5 949,404 + AO353_04405 0.48 -3.1 949,404 + AO353_04405 0.48 -0.6 949,404 + AO353_04405 0.48 -1.4 949,404 + AO353_04405 0.48 -1.1 949,405 - AO353_04405 0.48 +0.8 949,501 - AO353_04405 0.56 -2.8 949,558 - AO353_04405 0.60 -0.1 949,558 - AO353_04405 0.60 +0.3 949,558 - AO353_04405 0.60 +0.9 949,584 + AO353_04405 0.62 -1.3 949,584 + AO353_04405 0.62 +1.5 949,584 + AO353_04405 0.62 -0.9 949,585 - AO353_04405 0.62 +0.7 949,585 - AO353_04405 0.62 +1.1 949,585 - AO353_04405 0.62 -0.2 949,606 - AO353_04405 0.64 -0.0 949,606 - AO353_04405 0.64 -1.6
Or see this region's nucleotide sequence