Experiment: Cobalt chloride 0.32 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_02380 and AO353_02385 are separated by 91 nucleotides AO353_02385 and AO353_02390 are separated by 230 nucleotides AO353_02390 and AO353_02395 are separated by 394 nucleotides
AO353_02380: AO353_02380 - cell division topological specificity factor, at 506,004 to 506,258
_02380
AO353_02385: AO353_02385 - pseudouridine synthase, at 506,350 to 506,985
_02385
AO353_02390: AO353_02390 - aminopeptidase, at 507,216 to 508,505
_02390
AO353_02395: AO353_02395 - mechanosensitive ion channel protein, at 508,900 to 511,056
_02395
Position (kb) 507
508
509 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 506.335 kb on + strand at 506.335 kb on + strand at 506.348 kb on + strand at 506.348 kb on + strand at 506.349 kb on - strand at 506.393 kb on + strand at 506.393 kb on + strand at 506.412 kb on + strand at 506.413 kb on - strand at 506.614 kb on + strand, within AO353_02385 at 506.615 kb on - strand, within AO353_02385 at 506.867 kb on - strand, within AO353_02385 at 506.983 kb on + strand at 506.984 kb on - strand at 506.991 kb on - strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.993 kb on + strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 506.994 kb on - strand at 507.056 kb on + strand at 507.056 kb on + strand at 507.168 kb on + strand at 507.169 kb on - strand at 507.179 kb on + strand at 507.179 kb on + strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.180 kb on - strand at 507.184 kb on + strand at 507.185 kb on - strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.211 kb on + strand at 507.212 kb on - strand at 507.212 kb on - strand at 507.212 kb on - strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.215 kb on + strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.216 kb on - strand at 507.266 kb on + strand at 507.369 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.372 kb on + strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.373 kb on - strand, within AO353_02390 at 507.408 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.432 kb on + strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.433 kb on - strand, within AO353_02390 at 507.540 kb on + strand, within AO353_02390 at 507.541 kb on - strand, within AO353_02390 at 507.787 kb on + strand, within AO353_02390 at 507.788 kb on - strand, within AO353_02390 at 507.788 kb on - strand, within AO353_02390 at 507.843 kb on + strand, within AO353_02390 at 507.859 kb on - strand, within AO353_02390 at 507.940 kb on - strand, within AO353_02390 at 507.940 kb on - strand, within AO353_02390 at 508.150 kb on + strand, within AO353_02390 at 508.150 kb on + strand, within AO353_02390 at 508.150 kb on + strand, within AO353_02390 at 508.150 kb on + strand, within AO353_02390 at 508.150 kb on + strand, within AO353_02390 at 508.151 kb on - strand, within AO353_02390 at 508.151 kb on - strand, within AO353_02390 at 508.151 kb on - strand, within AO353_02390 at 508.151 kb on - strand, within AO353_02390 at 508.161 kb on + strand, within AO353_02390 at 508.161 kb on + strand, within AO353_02390 at 508.161 kb on + strand, within AO353_02390 at 508.161 kb on + strand, within AO353_02390 at 508.161 kb on + strand, within AO353_02390 at 508.162 kb on - strand, within AO353_02390 at 508.162 kb on - strand, within AO353_02390 at 508.162 kb on - strand, within AO353_02390 at 508.162 kb on - strand, within AO353_02390 at 508.378 kb on + strand at 508.482 kb on + strand at 508.483 kb on - strand at 508.550 kb on + strand at 508.609 kb on + strand at 508.609 kb on + strand at 508.609 kb on + strand at 508.609 kb on + strand at 508.609 kb on + strand at 508.609 kb on + strand at 508.610 kb on - strand at 508.610 kb on - strand at 508.610 kb on - strand at 508.610 kb on - strand at 508.610 kb on - strand at 508.615 kb on + strand at 508.615 kb on + strand at 508.615 kb on + strand at 508.615 kb on + strand at 508.615 kb on + strand at 508.615 kb on + strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.616 kb on - strand at 508.819 kb on + strand at 508.820 kb on - strand at 508.820 kb on - strand at 508.820 kb on - strand at 508.860 kb on + strand at 508.860 kb on + strand at 508.861 kb on - strand at 508.861 kb on - strand at 508.861 kb on - strand at 508.929 kb on + strand at 508.929 kb on + strand at 508.929 kb on + strand at 508.930 kb on - strand at 509.168 kb on + strand, within AO353_02395 at 509.169 kb on - strand, within AO353_02395 at 509.466 kb on + strand, within AO353_02395 at 509.466 kb on + strand, within AO353_02395 at 509.466 kb on + strand, within AO353_02395 at 509.466 kb on + strand, within AO353_02395 at 509.467 kb on - strand, within AO353_02395 at 509.467 kb on - strand, within AO353_02395 at 509.499 kb on + strand, within AO353_02395 at 509.500 kb on - strand, within AO353_02395 at 509.500 kb on - strand, within AO353_02395 at 509.500 kb on - strand, within AO353_02395 at 509.500 kb on - strand, within AO353_02395
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.32 mM remove 506,335 + +1.2 506,335 + +1.1 506,348 + -1.6 506,348 + -1.5 506,349 - +1.0 506,393 + -1.3 506,393 + -2.0 506,412 + -1.3 506,413 - -0.3 506,614 + AO353_02385 0.42 +0.2 506,615 - AO353_02385 0.42 -1.2 506,867 - AO353_02385 0.81 +0.6 506,983 + +0.4 506,984 - -0.3 506,991 - -0.7 506,993 + +0.6 506,993 + +0.1 506,993 + +0.6 506,993 + -1.0 506,993 + -0.5 506,993 + +0.6 506,993 + +1.3 506,993 + -0.3 506,994 - +0.1 506,994 - -0.3 506,994 - +1.2 506,994 - +2.0 506,994 - +0.8 506,994 - -0.2 506,994 - +0.4 507,056 + +0.9 507,056 + +0.2 507,168 + -0.2 507,169 - +0.4 507,179 + +1.6 507,179 + -0.8 507,180 - -0.9 507,180 - -0.7 507,180 - -0.2 507,180 - -0.2 507,180 - -0.9 507,184 + -0.6 507,185 - +0.1 507,211 + -0.4 507,211 + -1.4 507,211 + -1.5 507,211 + +0.8 507,211 + +0.6 507,211 + -0.4 507,212 - -1.0 507,212 - -0.8 507,212 - -2.5 507,215 + -1.3 507,215 + +0.8 507,215 + +0.1 507,215 + -1.9 507,215 + -2.2 507,216 - -1.2 507,216 - -1.1 507,216 - -0.2 507,216 - -1.0 507,216 - -0.4 507,216 - +0.4 507,266 + -0.9 507,369 + AO353_02390 0.12 -2.4 507,372 + AO353_02390 0.12 +0.2 507,372 + AO353_02390 0.12 +0.4 507,372 + AO353_02390 0.12 +0.3 507,372 + AO353_02390 0.12 -1.9 507,372 + AO353_02390 0.12 +1.8 507,372 + AO353_02390 0.12 +0.2 507,372 + AO353_02390 0.12 -0.4 507,372 + AO353_02390 0.12 -1.5 507,373 - AO353_02390 0.12 +0.4 507,373 - AO353_02390 0.12 -0.8 507,373 - AO353_02390 0.12 -1.2 507,373 - AO353_02390 0.12 +0.1 507,373 - AO353_02390 0.12 -2.3 507,373 - AO353_02390 0.12 +0.3 507,373 - AO353_02390 0.12 -0.2 507,373 - AO353_02390 0.12 +0.6 507,408 + AO353_02390 0.15 +0.3 507,432 + AO353_02390 0.17 -0.4 507,432 + AO353_02390 0.17 +1.4 507,432 + AO353_02390 0.17 -3.2 507,432 + AO353_02390 0.17 -1.7 507,432 + AO353_02390 0.17 -0.1 507,432 + AO353_02390 0.17 -0.5 507,432 + AO353_02390 0.17 -0.2 507,432 + AO353_02390 0.17 -1.1 507,433 - AO353_02390 0.17 -1.4 507,433 - AO353_02390 0.17 -0.1 507,433 - AO353_02390 0.17 -1.3 507,433 - AO353_02390 0.17 -2.4 507,433 - AO353_02390 0.17 +0.6 507,433 - AO353_02390 0.17 -0.5 507,433 - AO353_02390 0.17 -1.0 507,433 - AO353_02390 0.17 -0.6 507,433 - AO353_02390 0.17 +0.6 507,540 + AO353_02390 0.25 +0.0 507,541 - AO353_02390 0.25 +0.0 507,787 + AO353_02390 0.44 -1.2 507,788 - AO353_02390 0.44 +0.6 507,788 - AO353_02390 0.44 -0.2 507,843 + AO353_02390 0.49 +0.6 507,859 - AO353_02390 0.50 -1.0 507,940 - AO353_02390 0.56 -0.8 507,940 - AO353_02390 0.56 -2.1 508,150 + AO353_02390 0.72 -1.6 508,150 + AO353_02390 0.72 +0.2 508,150 + AO353_02390 0.72 -0.4 508,150 + AO353_02390 0.72 -0.3 508,150 + AO353_02390 0.72 -2.7 508,151 - AO353_02390 0.72 -1.3 508,151 - AO353_02390 0.72 -1.7 508,151 - AO353_02390 0.72 +1.2 508,151 - AO353_02390 0.72 -2.1 508,161 + AO353_02390 0.73 -1.5 508,161 + AO353_02390 0.73 -1.2 508,161 + AO353_02390 0.73 -1.9 508,161 + AO353_02390 0.73 -1.3 508,161 + AO353_02390 0.73 -0.9 508,162 - AO353_02390 0.73 -2.9 508,162 - AO353_02390 0.73 -0.5 508,162 - AO353_02390 0.73 -0.7 508,162 - AO353_02390 0.73 +0.2 508,378 + -0.6 508,482 + -0.6 508,483 - -3.0 508,550 + +0.5 508,609 + +0.3 508,609 + +1.3 508,609 + -1.5 508,609 + -1.0 508,609 + -0.4 508,609 + -0.6 508,610 - +0.3 508,610 - -1.2 508,610 - +1.0 508,610 - +0.0 508,610 - -1.4 508,615 + +1.0 508,615 + +1.2 508,615 + -0.7 508,615 + -1.1 508,615 + +0.4 508,615 + -0.7 508,616 - +0.6 508,616 - +0.7 508,616 - +0.2 508,616 - -0.8 508,616 - +1.2 508,616 - +1.0 508,616 - +0.8 508,616 - +1.2 508,616 - +0.8 508,616 - -0.9 508,616 - +1.7 508,616 - -0.8 508,616 - +1.4 508,616 - -0.5 508,616 - -0.1 508,616 - +0.6 508,616 - +0.8 508,616 - -0.2 508,616 - +0.9 508,616 - -0.4 508,616 - -1.6 508,616 - +0.4 508,616 - -1.3 508,616 - -1.2 508,616 - -1.0 508,616 - -0.4 508,616 - -1.0 508,819 + -0.4 508,820 - +0.0 508,820 - +0.0 508,820 - +0.2 508,860 + -0.1 508,860 + -1.2 508,861 - -0.2 508,861 - -1.4 508,861 - -1.6 508,929 + +0.2 508,929 + +1.6 508,929 + -0.2 508,930 - +0.9 509,168 + AO353_02395 0.12 -0.8 509,169 - AO353_02395 0.12 -1.2 509,466 + AO353_02395 0.26 -1.6 509,466 + AO353_02395 0.26 +0.8 509,466 + AO353_02395 0.26 -1.6 509,466 + AO353_02395 0.26 -0.4 509,467 - AO353_02395 0.26 -0.7 509,467 - AO353_02395 0.26 -0.4 509,499 + AO353_02395 0.28 +2.0 509,500 - AO353_02395 0.28 +0.1 509,500 - AO353_02395 0.28 -1.1 509,500 - AO353_02395 0.28 -1.7 509,500 - AO353_02395 0.28 +0.8
Or see this region's nucleotide sequence