Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_26765

Experiment: Cobalt chloride 0.16 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO353_26755 and AO353_26760 are separated by 390 nucleotidesAO353_26760 and AO353_26765 are separated by 287 nucleotidesAO353_26765 and AO353_26770 are separated by 126 nucleotides AO353_26755: AO353_26755 - hypothetical protein, at 5,859,247 to 5,859,600 _26755 AO353_26760: AO353_26760 - hypothetical protein, at 5,859,991 to 5,860,281 _26760 AO353_26765: AO353_26765 - magnesium-translocating P-type ATPase, at 5,860,569 to 5,863,283 _26765 AO353_26770: AO353_26770 - Na/Pi cotransporter, at 5,863,410 to 5,865,104 _26770 Position (kb) 5860 5861 5862 5863 5864Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 5859.598 kb on + strandat 5859.598 kb on + strandat 5859.661 kb on - strandat 5859.661 kb on - strandat 5859.661 kb on - strandat 5859.686 kb on + strandat 5859.686 kb on + strandat 5859.686 kb on + strandat 5859.686 kb on + strandat 5859.715 kb on + strandat 5859.723 kb on + strandat 5859.724 kb on - strandat 5859.724 kb on - strandat 5859.745 kb on + strandat 5859.746 kb on - strandat 5859.773 kb on + strandat 5859.773 kb on + strandat 5859.774 kb on - strandat 5859.774 kb on - strandat 5859.774 kb on - strandat 5859.836 kb on + strandat 5859.836 kb on + strandat 5859.836 kb on + strandat 5859.837 kb on - strandat 5859.837 kb on - strandat 5859.882 kb on + strandat 5859.882 kb on + strandat 5859.950 kb on + strandat 5859.991 kb on - strandat 5860.005 kb on + strandat 5860.005 kb on + strandat 5860.010 kb on + strandat 5860.010 kb on + strandat 5860.011 kb on - strandat 5860.011 kb on - strandat 5860.023 kb on - strand, within AO353_26760at 5860.049 kb on + strand, within AO353_26760at 5860.242 kb on - strand, within AO353_26760at 5860.290 kb on + strandat 5860.290 kb on + strandat 5860.304 kb on + strandat 5860.304 kb on + strandat 5860.304 kb on + strandat 5860.304 kb on + strandat 5860.305 kb on - strandat 5860.305 kb on - strandat 5860.305 kb on - strandat 5860.401 kb on - strandat 5860.463 kb on + strandat 5860.463 kb on + strandat 5860.497 kb on + strandat 5860.497 kb on + strandat 5860.513 kb on + strandat 5860.514 kb on - strandat 5860.517 kb on + strandat 5860.517 kb on + strandat 5860.517 kb on + strandat 5860.518 kb on - strandat 5860.579 kb on + strandat 5860.579 kb on + strandat 5860.579 kb on + strandat 5860.673 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.824 kb on + strandat 5860.825 kb on - strandat 5860.825 kb on - strandat 5860.825 kb on - strandat 5860.825 kb on - strandat 5860.825 kb on - strandat 5860.825 kb on - strandat 5860.825 kb on - strandat 5860.825 kb on - strandat 5860.825 kb on - strandat 5860.825 kb on - strandat 5860.866 kb on + strand, within AO353_26765at 5860.919 kb on + strand, within AO353_26765at 5860.919 kb on + strand, within AO353_26765at 5861.214 kb on + strand, within AO353_26765at 5861.214 kb on + strand, within AO353_26765at 5861.214 kb on + strand, within AO353_26765at 5861.215 kb on - strand, within AO353_26765at 5861.215 kb on - strand, within AO353_26765at 5861.215 kb on - strand, within AO353_26765at 5861.215 kb on - strand, within AO353_26765at 5861.215 kb on - strand, within AO353_26765at 5861.215 kb on - strand, within AO353_26765at 5861.367 kb on + strand, within AO353_26765at 5861.367 kb on + strand, within AO353_26765at 5861.368 kb on - strand, within AO353_26765at 5861.368 kb on - strand, within AO353_26765at 5861.368 kb on - strand, within AO353_26765at 5861.368 kb on - strand, within AO353_26765at 5861.368 kb on - strand, within AO353_26765at 5861.431 kb on + strand, within AO353_26765at 5861.432 kb on - strand, within AO353_26765at 5862.037 kb on + strand, within AO353_26765at 5862.038 kb on - strand, within AO353_26765at 5862.091 kb on - strand, within AO353_26765at 5862.091 kb on - strand, within AO353_26765at 5862.163 kb on - strand, within AO353_26765at 5862.191 kb on - strand, within AO353_26765at 5862.191 kb on - strand, within AO353_26765at 5862.548 kb on + strand, within AO353_26765at 5862.675 kb on + strand, within AO353_26765at 5862.676 kb on - strand, within AO353_26765at 5862.792 kb on + strand, within AO353_26765at 5862.792 kb on + strand, within AO353_26765at 5862.792 kb on + strand, within AO353_26765at 5862.792 kb on + strand, within AO353_26765at 5862.793 kb on - strand, within AO353_26765at 5862.793 kb on - strand, within AO353_26765at 5862.793 kb on - strand, within AO353_26765at 5862.793 kb on - strand, within AO353_26765at 5862.793 kb on - strand, within AO353_26765at 5862.840 kb on + strand, within AO353_26765at 5862.948 kb on + strand, within AO353_26765at 5862.949 kb on - strand, within AO353_26765at 5862.949 kb on - strand, within AO353_26765at 5862.949 kb on - strand, within AO353_26765at 5863.131 kb on + strandat 5863.131 kb on + strandat 5863.131 kb on + strandat 5863.132 kb on - strandat 5863.132 kb on - strandat 5863.132 kb on - strandat 5863.132 kb on - strandat 5863.132 kb on - strandat 5863.132 kb on - strandat 5863.132 kb on - strandat 5863.132 kb on - strandat 5863.188 kb on + strandat 5863.188 kb on + strandat 5863.189 kb on - strandat 5863.221 kb on + strandat 5863.222 kb on - strandat 5863.254 kb on + strandat 5863.254 kb on + strandat 5863.254 kb on + strandat 5863.255 kb on - strandat 5863.255 kb on - strandat 5863.255 kb on - strandat 5863.351 kb on - strandat 5863.351 kb on - strandat 5863.351 kb on - strandat 5863.353 kb on - strandat 5863.353 kb on - strandat 5863.353 kb on - strandat 5863.353 kb on - strandat 5863.391 kb on + strandat 5863.391 kb on + strandat 5863.392 kb on - strandat 5863.392 kb on - strandat 5863.392 kb on - strandat 5863.421 kb on + strandat 5863.421 kb on + strandat 5863.421 kb on + strandat 5863.421 kb on + strandat 5863.421 kb on + strandat 5863.421 kb on + strandat 5863.421 kb on + strandat 5863.422 kb on - strandat 5863.422 kb on - strandat 5863.422 kb on - strandat 5863.422 kb on - strandat 5863.422 kb on - strandat 5863.422 kb on - strandat 5863.422 kb on - strandat 5863.422 kb on - strandat 5863.422 kb on - strandat 5863.422 kb on - strandat 5863.426 kb on + strandat 5863.426 kb on + strandat 5863.427 kb on - strandat 5863.427 kb on - strandat 5863.427 kb on - strandat 5863.427 kb on - strandat 5863.475 kb on + strandat 5863.475 kb on + strandat 5863.476 kb on - strandat 5863.746 kb on - strand, within AO353_26770at 5863.798 kb on - strand, within AO353_26770at 5863.853 kb on + strand, within AO353_26770at 5863.853 kb on + strand, within AO353_26770at 5863.853 kb on + strand, within AO353_26770at 5863.853 kb on + strand, within AO353_26770at 5863.853 kb on + strand, within AO353_26770at 5863.853 kb on + strand, within AO353_26770at 5863.853 kb on + strand, within AO353_26770at 5863.853 kb on + strand, within AO353_26770at 5863.853 kb on + strand, within AO353_26770at 5863.854 kb on - strand, within AO353_26770at 5863.854 kb on - strand, within AO353_26770at 5863.854 kb on - strand, within AO353_26770at 5863.854 kb on - strand, within AO353_26770at 5863.854 kb on - strand, within AO353_26770at 5863.854 kb on - strand, within AO353_26770at 5863.854 kb on - strand, within AO353_26770at 5863.854 kb on - strand, within AO353_26770at 5863.854 kb on - strand, within AO353_26770

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Per-strain Table

Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM
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5,859,598 + +0.8
5,859,598 + -1.8
5,859,661 - -1.6
5,859,661 - -0.9
5,859,661 - -2.8
5,859,686 + +0.1
5,859,686 + +0.7
5,859,686 + -0.1
5,859,686 + +1.0
5,859,715 + +0.6
5,859,723 + -0.6
5,859,724 - -0.6
5,859,724 - +0.3
5,859,745 + -2.5
5,859,746 - +0.1
5,859,773 + -2.1
5,859,773 + +0.4
5,859,774 - -0.5
5,859,774 - -2.0
5,859,774 - -0.7
5,859,836 + -1.3
5,859,836 + -1.1
5,859,836 + +2.3
5,859,837 - +0.1
5,859,837 - -2.0
5,859,882 + +1.6
5,859,882 + +0.6
5,859,950 + -0.0
5,859,991 - -2.3
5,860,005 + -1.0
5,860,005 + -1.3
5,860,010 + +0.6
5,860,010 + -0.6
5,860,011 - -1.0
5,860,011 - -1.1
5,860,023 - AO353_26760 0.11 -0.9
5,860,049 + AO353_26760 0.20 -1.1
5,860,242 - AO353_26760 0.86 -1.8
5,860,290 + -0.2
5,860,290 + -0.1
5,860,304 + +1.1
5,860,304 + +1.4
5,860,304 + +1.4
5,860,304 + +0.1
5,860,305 - -0.4
5,860,305 - +0.1
5,860,305 - -1.6
5,860,401 - +0.3
5,860,463 + +2.3
5,860,463 + +1.6
5,860,497 + -0.0
5,860,497 + +1.2
5,860,513 + -0.8
5,860,514 - -0.3
5,860,517 + -0.8
5,860,517 + -1.2
5,860,517 + -0.8
5,860,518 - -0.9
5,860,579 + -0.4
5,860,579 + -1.6
5,860,579 + -2.8
5,860,673 + -0.6
5,860,824 + -1.0
5,860,824 + -2.5
5,860,824 + -1.9
5,860,824 + -1.6
5,860,824 + -0.6
5,860,824 + -0.7
5,860,824 + -0.8
5,860,824 + +0.5
5,860,824 + -1.6
5,860,824 + -1.4
5,860,824 + -0.4
5,860,824 + -1.8
5,860,824 + -1.1
5,860,825 - -0.0
5,860,825 - -2.5
5,860,825 - -0.3
5,860,825 - -0.4
5,860,825 - -0.9
5,860,825 - -1.6
5,860,825 - -2.3
5,860,825 - -2.1
5,860,825 - -0.8
5,860,825 - -0.6
5,860,866 + AO353_26765 0.11 -1.2
5,860,919 + AO353_26765 0.13 -0.3
5,860,919 + AO353_26765 0.13 -1.2
5,861,214 + AO353_26765 0.24 -2.0
5,861,214 + AO353_26765 0.24 -0.3
5,861,214 + AO353_26765 0.24 -1.8
5,861,215 - AO353_26765 0.24 -1.5
5,861,215 - AO353_26765 0.24 -1.5
5,861,215 - AO353_26765 0.24 -0.5
5,861,215 - AO353_26765 0.24 -1.1
5,861,215 - AO353_26765 0.24 -1.2
5,861,215 - AO353_26765 0.24 +0.6
5,861,367 + AO353_26765 0.29 -0.2
5,861,367 + AO353_26765 0.29 -1.0
5,861,368 - AO353_26765 0.29 -1.3
5,861,368 - AO353_26765 0.29 -0.1
5,861,368 - AO353_26765 0.29 -2.8
5,861,368 - AO353_26765 0.29 -0.8
5,861,368 - AO353_26765 0.29 +0.3
5,861,431 + AO353_26765 0.32 -0.3
5,861,432 - AO353_26765 0.32 +0.6
5,862,037 + AO353_26765 0.54 -0.4
5,862,038 - AO353_26765 0.54 -2.1
5,862,091 - AO353_26765 0.56 -2.7
5,862,091 - AO353_26765 0.56 -0.6
5,862,163 - AO353_26765 0.59 -1.4
5,862,191 - AO353_26765 0.60 -1.0
5,862,191 - AO353_26765 0.60 -0.2
5,862,548 + AO353_26765 0.73 -1.0
5,862,675 + AO353_26765 0.78 -0.8
5,862,676 - AO353_26765 0.78 -0.6
5,862,792 + AO353_26765 0.82 +0.1
5,862,792 + AO353_26765 0.82 -0.6
5,862,792 + AO353_26765 0.82 -0.2
5,862,792 + AO353_26765 0.82 -0.8
5,862,793 - AO353_26765 0.82 -0.6
5,862,793 - AO353_26765 0.82 -0.5
5,862,793 - AO353_26765 0.82 +1.3
5,862,793 - AO353_26765 0.82 -1.1
5,862,793 - AO353_26765 0.82 -0.9
5,862,840 + AO353_26765 0.84 -0.2
5,862,948 + AO353_26765 0.88 +0.1
5,862,949 - AO353_26765 0.88 +0.3
5,862,949 - AO353_26765 0.88 -0.6
5,862,949 - AO353_26765 0.88 -0.8
5,863,131 + -1.7
5,863,131 + -0.4
5,863,131 + -2.2
5,863,132 - -1.2
5,863,132 - +1.1
5,863,132 - -1.2
5,863,132 - -3.4
5,863,132 - -0.9
5,863,132 - -1.1
5,863,132 - +0.6
5,863,132 - -0.8
5,863,188 + +0.2
5,863,188 + +0.6
5,863,189 - -1.5
5,863,221 + -2.3
5,863,222 - -1.8
5,863,254 + -1.0
5,863,254 + -1.2
5,863,254 + -0.4
5,863,255 - -0.8
5,863,255 - -1.0
5,863,255 - -0.4
5,863,351 - -1.1
5,863,351 - -1.3
5,863,351 - -0.8
5,863,353 - +0.2
5,863,353 - -0.1
5,863,353 - -0.0
5,863,353 - -0.7
5,863,391 + -0.4
5,863,391 + +1.0
5,863,392 - -1.0
5,863,392 - -0.9
5,863,392 - -0.5
5,863,421 + -1.1
5,863,421 + -0.4
5,863,421 + +0.6
5,863,421 + -0.4
5,863,421 + -0.1
5,863,421 + -1.8
5,863,421 + +0.5
5,863,422 - +0.4
5,863,422 - +0.6
5,863,422 - -0.2
5,863,422 - +0.0
5,863,422 - -1.4
5,863,422 - -0.5
5,863,422 - -0.3
5,863,422 - -0.3
5,863,422 - -1.9
5,863,422 - -2.4
5,863,426 + -1.3
5,863,426 + -0.6
5,863,427 - -0.2
5,863,427 - -0.0
5,863,427 - -0.2
5,863,427 - -0.4
5,863,475 + +1.6
5,863,475 + -0.4
5,863,476 - -0.6
5,863,746 - AO353_26770 0.20 -0.5
5,863,798 - AO353_26770 0.23 -1.3
5,863,853 + AO353_26770 0.26 +0.3
5,863,853 + AO353_26770 0.26 -0.4
5,863,853 + AO353_26770 0.26 +0.2
5,863,853 + AO353_26770 0.26 -0.3
5,863,853 + AO353_26770 0.26 -0.0
5,863,853 + AO353_26770 0.26 -0.2
5,863,853 + AO353_26770 0.26 -2.3
5,863,853 + AO353_26770 0.26 -1.6
5,863,853 + AO353_26770 0.26 -0.6
5,863,854 - AO353_26770 0.26 -0.1
5,863,854 - AO353_26770 0.26 -0.0
5,863,854 - AO353_26770 0.26 +0.1
5,863,854 - AO353_26770 0.26 -1.6
5,863,854 - AO353_26770 0.26 -1.6
5,863,854 - AO353_26770 0.26 +0.2
5,863,854 - AO353_26770 0.26 -1.0
5,863,854 - AO353_26770 0.26 -0.5
5,863,854 - AO353_26770 0.26 -2.2

Or see this region's nucleotide sequence