Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23870 and AO353_23875 are separated by 51 nucleotides AO353_23875 and AO353_23880 are separated by 124 nucleotides
AO353_23870: AO353_23870 - DNA-binding protein, at 5,238,703 to 5,239,419
_23870
AO353_23875: AO353_23875 - ketosteroid isomerase, at 5,239,471 to 5,239,812
_23875
AO353_23880: AO353_23880 - ATPase, at 5,239,937 to 5,241,055
_23880
Position (kb) 5239
5240 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5238.471 kb on + strand at 5238.534 kb on + strand at 5238.534 kb on + strand at 5238.540 kb on + strand at 5238.540 kb on + strand at 5238.562 kb on + strand at 5238.563 kb on - strand at 5238.563 kb on - strand at 5238.569 kb on + strand at 5238.569 kb on + strand at 5238.570 kb on - strand at 5238.570 kb on - strand at 5238.592 kb on + strand at 5238.592 kb on + strand at 5238.592 kb on + strand at 5238.628 kb on + strand at 5238.629 kb on - strand at 5238.629 kb on - strand at 5238.629 kb on - strand at 5238.629 kb on - strand at 5238.664 kb on + strand at 5238.664 kb on + strand at 5238.665 kb on - strand at 5238.665 kb on - strand at 5238.711 kb on + strand at 5238.877 kb on + strand, within AO353_23870 at 5238.878 kb on - strand, within AO353_23870 at 5238.878 kb on - strand, within AO353_23870 at 5238.958 kb on + strand, within AO353_23870 at 5238.958 kb on + strand, within AO353_23870 at 5239.124 kb on + strand, within AO353_23870 at 5239.124 kb on + strand, within AO353_23870 at 5239.125 kb on - strand, within AO353_23870 at 5239.433 kb on + strand at 5239.433 kb on + strand at 5239.433 kb on + strand at 5239.433 kb on + strand at 5239.434 kb on - strand at 5239.434 kb on - strand at 5239.434 kb on - strand at 5239.468 kb on - strand at 5239.513 kb on + strand, within AO353_23875 at 5239.513 kb on + strand, within AO353_23875 at 5239.513 kb on + strand, within AO353_23875 at 5239.514 kb on - strand, within AO353_23875 at 5239.514 kb on - strand, within AO353_23875 at 5239.514 kb on - strand, within AO353_23875 at 5239.514 kb on - strand, within AO353_23875 at 5239.515 kb on + strand, within AO353_23875 at 5239.515 kb on + strand, within AO353_23875 at 5239.515 kb on + strand, within AO353_23875 at 5239.515 kb on + strand, within AO353_23875 at 5239.700 kb on + strand, within AO353_23875 at 5239.700 kb on + strand, within AO353_23875 at 5239.701 kb on - strand, within AO353_23875 at 5239.701 kb on - strand, within AO353_23875 at 5239.757 kb on - strand, within AO353_23875 at 5239.903 kb on + strand at 5239.903 kb on + strand at 5239.904 kb on - strand at 5239.904 kb on - strand at 5239.904 kb on - strand at 5239.965 kb on - strand at 5240.085 kb on - strand, within AO353_23880 at 5240.628 kb on - strand at 5240.665 kb on - strand, within AO353_23880
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 5,238,471 + +0.8 5,238,534 + -0.5 5,238,534 + -1.2 5,238,540 + +0.7 5,238,540 + -0.6 5,238,562 + +2.2 5,238,563 - -2.1 5,238,563 - -0.7 5,238,569 + -0.9 5,238,569 + -1.1 5,238,570 - +0.6 5,238,570 - +0.3 5,238,592 + -0.4 5,238,592 + -0.1 5,238,592 + -1.1 5,238,628 + +0.5 5,238,629 - +0.9 5,238,629 - +0.2 5,238,629 - +0.7 5,238,629 - +1.4 5,238,664 + +0.1 5,238,664 + +0.6 5,238,665 - +1.2 5,238,665 - -1.2 5,238,711 + +0.1 5,238,877 + AO353_23870 0.24 -0.9 5,238,878 - AO353_23870 0.24 +0.3 5,238,878 - AO353_23870 0.24 -0.1 5,238,958 + AO353_23870 0.36 -0.3 5,238,958 + AO353_23870 0.36 +1.7 5,239,124 + AO353_23870 0.59 -2.7 5,239,124 + AO353_23870 0.59 -0.6 5,239,125 - AO353_23870 0.59 -0.3 5,239,433 + +0.1 5,239,433 + -1.5 5,239,433 + -0.8 5,239,433 + +0.2 5,239,434 - -0.5 5,239,434 - +0.1 5,239,434 - +1.7 5,239,468 - +1.0 5,239,513 + AO353_23875 0.12 -1.0 5,239,513 + AO353_23875 0.12 -0.1 5,239,513 + AO353_23875 0.12 -2.2 5,239,514 - AO353_23875 0.13 -2.6 5,239,514 - AO353_23875 0.13 -1.7 5,239,514 - AO353_23875 0.13 -0.2 5,239,514 - AO353_23875 0.13 -1.6 5,239,515 + AO353_23875 0.13 -0.5 5,239,515 + AO353_23875 0.13 -0.8 5,239,515 + AO353_23875 0.13 +0.3 5,239,515 + AO353_23875 0.13 -0.9 5,239,700 + AO353_23875 0.67 -0.1 5,239,700 + AO353_23875 0.67 -0.3 5,239,701 - AO353_23875 0.67 +0.0 5,239,701 - AO353_23875 0.67 -1.3 5,239,757 - AO353_23875 0.84 +0.5 5,239,903 + +0.2 5,239,903 + -2.3 5,239,904 - +0.8 5,239,904 - +0.5 5,239,904 - -0.6 5,239,965 - -0.5 5,240,085 - AO353_23880 0.13 +0.5 5,240,628 - +1.5 5,240,665 - AO353_23880 0.65 +0.3
Or see this region's nucleotide sequence