Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_23710 and AO353_23715 overlap by 4 nucleotides AO353_23715 and AO353_23720 overlap by 4 nucleotides
AO353_23710: AO353_23710 - protein BatD, at 5,196,687 to 5,198,327
_23710
AO353_23715: AO353_23715 - hypothetical protein, at 5,198,324 to 5,200,075
_23715
AO353_23720: AO353_23720 - BatB protein, at 5,200,072 to 5,201,148
_23720
Position (kb) 5198
5199
5200
5201 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5197.484 kb on + strand, within AO353_23710 at 5197.484 kb on + strand, within AO353_23710 at 5197.771 kb on + strand, within AO353_23710 at 5197.772 kb on - strand, within AO353_23710 at 5197.826 kb on + strand, within AO353_23710 at 5197.827 kb on - strand, within AO353_23710 at 5197.844 kb on - strand, within AO353_23710 at 5197.844 kb on - strand, within AO353_23710 at 5197.844 kb on - strand, within AO353_23710 at 5197.861 kb on + strand, within AO353_23710 at 5197.862 kb on - strand, within AO353_23710 at 5197.897 kb on + strand, within AO353_23710 at 5197.897 kb on + strand, within AO353_23710 at 5197.898 kb on - strand, within AO353_23710 at 5197.898 kb on - strand, within AO353_23710 at 5197.898 kb on - strand, within AO353_23710 at 5197.898 kb on - strand, within AO353_23710 at 5198.005 kb on + strand, within AO353_23710 at 5198.005 kb on + strand, within AO353_23710 at 5198.364 kb on + strand at 5198.738 kb on + strand, within AO353_23715 at 5198.739 kb on - strand at 5198.769 kb on - strand, within AO353_23715 at 5198.799 kb on + strand, within AO353_23715 at 5198.800 kb on - strand, within AO353_23715 at 5198.800 kb on - strand, within AO353_23715 at 5198.857 kb on - strand, within AO353_23715 at 5198.857 kb on - strand, within AO353_23715 at 5198.857 kb on - strand, within AO353_23715 at 5198.857 kb on - strand, within AO353_23715 at 5198.857 kb on - strand, within AO353_23715 at 5198.907 kb on + strand, within AO353_23715 at 5198.907 kb on + strand, within AO353_23715 at 5198.908 kb on - strand, within AO353_23715 at 5198.922 kb on + strand, within AO353_23715 at 5198.922 kb on + strand, within AO353_23715 at 5198.922 kb on + strand, within AO353_23715 at 5198.923 kb on - strand, within AO353_23715 at 5199.048 kb on + strand, within AO353_23715 at 5199.147 kb on + strand, within AO353_23715 at 5199.148 kb on - strand, within AO353_23715 at 5199.203 kb on - strand, within AO353_23715 at 5199.296 kb on - strand, within AO353_23715 at 5199.521 kb on + strand, within AO353_23715 at 5199.702 kb on - strand, within AO353_23715 at 5200.238 kb on + strand, within AO353_23720 at 5200.238 kb on + strand, within AO353_23720 at 5200.239 kb on - strand, within AO353_23720 at 5200.239 kb on - strand, within AO353_23720 at 5200.239 kb on - strand, within AO353_23720 at 5200.346 kb on + strand, within AO353_23720 at 5200.671 kb on + strand, within AO353_23720 at 5200.672 kb on - strand, within AO353_23720 at 5200.712 kb on + strand, within AO353_23720 at 5200.712 kb on + strand, within AO353_23720 at 5200.713 kb on - strand, within AO353_23720 at 5200.713 kb on - strand, within AO353_23720
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 5,197,484 + AO353_23710 0.49 +0.5 5,197,484 + AO353_23710 0.49 +0.2 5,197,771 + AO353_23710 0.66 +1.7 5,197,772 - AO353_23710 0.66 +0.4 5,197,826 + AO353_23710 0.69 -0.8 5,197,827 - AO353_23710 0.69 +1.3 5,197,844 - AO353_23710 0.71 -0.5 5,197,844 - AO353_23710 0.71 -0.2 5,197,844 - AO353_23710 0.71 +0.3 5,197,861 + AO353_23710 0.72 +0.4 5,197,862 - AO353_23710 0.72 +3.1 5,197,897 + AO353_23710 0.74 +0.4 5,197,897 + AO353_23710 0.74 +1.3 5,197,898 - AO353_23710 0.74 -0.2 5,197,898 - AO353_23710 0.74 +0.6 5,197,898 - AO353_23710 0.74 +0.3 5,197,898 - AO353_23710 0.74 -1.5 5,198,005 + AO353_23710 0.80 -1.4 5,198,005 + AO353_23710 0.80 -0.2 5,198,364 + +0.3 5,198,738 + AO353_23715 0.24 -1.1 5,198,739 - +0.5 5,198,769 - AO353_23715 0.25 +0.1 5,198,799 + AO353_23715 0.27 -1.1 5,198,800 - AO353_23715 0.27 +1.2 5,198,800 - AO353_23715 0.27 -1.5 5,198,857 - AO353_23715 0.30 +0.5 5,198,857 - AO353_23715 0.30 -1.8 5,198,857 - AO353_23715 0.30 -0.4 5,198,857 - AO353_23715 0.30 +0.2 5,198,857 - AO353_23715 0.30 -0.3 5,198,907 + AO353_23715 0.33 +0.1 5,198,907 + AO353_23715 0.33 -0.6 5,198,908 - AO353_23715 0.33 +0.9 5,198,922 + AO353_23715 0.34 -0.5 5,198,922 + AO353_23715 0.34 -0.1 5,198,922 + AO353_23715 0.34 -0.8 5,198,923 - AO353_23715 0.34 -0.2 5,199,048 + AO353_23715 0.41 +0.8 5,199,147 + AO353_23715 0.47 +0.8 5,199,148 - AO353_23715 0.47 -0.9 5,199,203 - AO353_23715 0.50 +2.3 5,199,296 - AO353_23715 0.55 -2.7 5,199,521 + AO353_23715 0.68 +0.4 5,199,702 - AO353_23715 0.79 -0.7 5,200,238 + AO353_23720 0.15 -0.9 5,200,238 + AO353_23720 0.15 -0.3 5,200,239 - AO353_23720 0.16 +0.1 5,200,239 - AO353_23720 0.16 +0.3 5,200,239 - AO353_23720 0.16 -1.3 5,200,346 + AO353_23720 0.25 +0.5 5,200,671 + AO353_23720 0.56 -0.3 5,200,672 - AO353_23720 0.56 -1.7 5,200,712 + AO353_23720 0.59 +0.2 5,200,712 + AO353_23720 0.59 +0.8 5,200,713 - AO353_23720 0.60 -0.1 5,200,713 - AO353_23720 0.60 -1.4
Or see this region's nucleotide sequence