Experiment: Cobalt chloride 0.16 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_06375 and AO353_06380 are separated by 259 nucleotides AO353_06380 and AO353_06385 overlap by 8 nucleotides AO353_06385 and AO353_06390 are separated by 5 nucleotides
AO353_06375: AO353_06375 - (dimethylallyl)adenosine tRNA methylthiotransferase, at 1,421,460 to 1,422,794
_06375
AO353_06380: AO353_06380 - ATP-binding protein, at 1,423,054 to 1,424,073
_06380
AO353_06385: AO353_06385 - rRNA maturation factor, at 1,424,066 to 1,424,560
_06385
AO353_06390: AO353_06390 - magnesium transporter, at 1,424,566 to 1,425,405
_06390
Position (kb)
1423
1424
1425 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1422.159 kb on - strand, within AO353_06375 at 1422.223 kb on + strand, within AO353_06375 at 1422.223 kb on + strand, within AO353_06375 at 1422.224 kb on - strand, within AO353_06375 at 1422.315 kb on + strand, within AO353_06375 at 1422.315 kb on + strand, within AO353_06375 at 1422.315 kb on + strand, within AO353_06375 at 1422.315 kb on + strand, within AO353_06375 at 1422.316 kb on - strand, within AO353_06375 at 1422.316 kb on - strand, within AO353_06375 at 1422.316 kb on - strand, within AO353_06375 at 1422.316 kb on - strand, within AO353_06375 at 1422.316 kb on - strand, within AO353_06375 at 1422.316 kb on - strand, within AO353_06375 at 1422.316 kb on - strand, within AO353_06375 at 1422.316 kb on - strand, within AO353_06375 at 1422.316 kb on - strand, within AO353_06375 at 1422.316 kb on - strand, within AO353_06375 at 1422.316 kb on - strand, within AO353_06375 at 1422.378 kb on - strand, within AO353_06375 at 1422.460 kb on - strand, within AO353_06375 at 1422.678 kb on - strand at 1422.688 kb on + strand at 1422.688 kb on + strand at 1422.689 kb on - strand at 1422.689 kb on - strand at 1422.766 kb on + strand at 1422.792 kb on + strand at 1422.793 kb on - strand at 1422.793 kb on - strand at 1422.793 kb on - strand at 1422.874 kb on + strand at 1422.875 kb on - strand at 1422.891 kb on + strand at 1422.979 kb on + strand at 1422.979 kb on + strand at 1422.979 kb on + strand at 1423.020 kb on + strand at 1423.020 kb on + strand at 1423.067 kb on + strand at 1423.420 kb on + strand, within AO353_06380 at 1423.420 kb on + strand, within AO353_06380 at 1423.420 kb on + strand, within AO353_06380 at 1423.420 kb on + strand, within AO353_06380 at 1423.486 kb on + strand, within AO353_06380 at 1423.486 kb on + strand, within AO353_06380 at 1423.486 kb on + strand, within AO353_06380 at 1423.486 kb on + strand, within AO353_06380 at 1423.486 kb on + strand, within AO353_06380 at 1423.486 kb on + strand, within AO353_06380 at 1423.486 kb on + strand, within AO353_06380 at 1423.486 kb on + strand, within AO353_06380 at 1423.486 kb on + strand, within AO353_06380 at 1423.550 kb on + strand, within AO353_06380 at 1423.636 kb on + strand, within AO353_06380 at 1423.636 kb on + strand, within AO353_06380 at 1423.720 kb on + strand, within AO353_06380 at 1423.720 kb on + strand, within AO353_06380 at 1423.720 kb on + strand, within AO353_06380 at 1423.720 kb on + strand, within AO353_06380 at 1423.720 kb on + strand, within AO353_06380 at 1423.720 kb on + strand, within AO353_06380 at 1423.720 kb on + strand, within AO353_06380 at 1423.935 kb on + strand, within AO353_06380 at 1423.935 kb on + strand, within AO353_06380 at 1423.996 kb on + strand at 1424.539 kb on + strand at 1424.539 kb on + strand at 1424.558 kb on + strand at 1424.565 kb on + strand at 1424.753 kb on + strand, within AO353_06390 at 1424.753 kb on + strand, within AO353_06390 at 1424.753 kb on + strand, within AO353_06390
Per-strain Table
Position Strand Gene LocusTag Fraction Cobalt chloride 0.16 mM remove 1,422,159 - AO353_06375 0.52 +0.8 1,422,223 + AO353_06375 0.57 +1.1 1,422,223 + AO353_06375 0.57 +0.2 1,422,224 - AO353_06375 0.57 +1.7 1,422,315 + AO353_06375 0.64 -1.3 1,422,315 + AO353_06375 0.64 -1.1 1,422,315 + AO353_06375 0.64 +0.1 1,422,315 + AO353_06375 0.64 -0.7 1,422,316 - AO353_06375 0.64 -1.5 1,422,316 - AO353_06375 0.64 -0.1 1,422,316 - AO353_06375 0.64 +0.3 1,422,316 - AO353_06375 0.64 +0.9 1,422,316 - AO353_06375 0.64 -0.2 1,422,316 - AO353_06375 0.64 +0.5 1,422,316 - AO353_06375 0.64 -1.1 1,422,316 - AO353_06375 0.64 +0.2 1,422,316 - AO353_06375 0.64 -0.0 1,422,316 - AO353_06375 0.64 -0.5 1,422,316 - AO353_06375 0.64 +1.2 1,422,378 - AO353_06375 0.69 -0.5 1,422,460 - AO353_06375 0.75 -0.9 1,422,678 - +0.1 1,422,688 + +0.5 1,422,688 + +0.5 1,422,689 - +2.1 1,422,689 - +0.7 1,422,766 + -0.5 1,422,792 + -0.5 1,422,793 - +1.3 1,422,793 - +1.5 1,422,793 - -0.2 1,422,874 + -2.0 1,422,875 - -1.1 1,422,891 + +0.5 1,422,979 + -3.1 1,422,979 + -1.5 1,422,979 + -2.9 1,423,020 + +1.3 1,423,020 + -2.3 1,423,067 + -0.9 1,423,420 + AO353_06380 0.36 -1.0 1,423,420 + AO353_06380 0.36 +0.1 1,423,420 + AO353_06380 0.36 +0.2 1,423,420 + AO353_06380 0.36 -1.1 1,423,486 + AO353_06380 0.42 +1.8 1,423,486 + AO353_06380 0.42 -1.5 1,423,486 + AO353_06380 0.42 +0.3 1,423,486 + AO353_06380 0.42 +1.7 1,423,486 + AO353_06380 0.42 -0.9 1,423,486 + AO353_06380 0.42 +0.4 1,423,486 + AO353_06380 0.42 -0.5 1,423,486 + AO353_06380 0.42 +0.6 1,423,486 + AO353_06380 0.42 +0.6 1,423,550 + AO353_06380 0.49 -1.9 1,423,636 + AO353_06380 0.57 +0.3 1,423,636 + AO353_06380 0.57 -1.6 1,423,720 + AO353_06380 0.65 -2.1 1,423,720 + AO353_06380 0.65 -1.5 1,423,720 + AO353_06380 0.65 -0.5 1,423,720 + AO353_06380 0.65 -2.9 1,423,720 + AO353_06380 0.65 -1.8 1,423,720 + AO353_06380 0.65 -0.1 1,423,720 + AO353_06380 0.65 -1.6 1,423,935 + AO353_06380 0.86 -3.2 1,423,935 + AO353_06380 0.86 -0.0 1,423,996 + -0.9 1,424,539 + -0.3 1,424,539 + -1.7 1,424,558 + +0.2 1,424,565 + +0.2 1,424,753 + AO353_06390 0.22 +0.4 1,424,753 + AO353_06390 0.22 +0.5 1,424,753 + AO353_06390 0.22 +1.3
Or see this region's nucleotide sequence