Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS19945

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS19940 and ABZR86_RS19945 are separated by 390 nucleotidesABZR86_RS19945 and ABZR86_RS19950 are separated by 347 nucleotidesABZR86_RS19950 and ABZR86_RS19955 are separated by 55 nucleotides ABZR86_RS19940: ABZR86_RS19940 - M28 family metallopeptidase, at 483,599 to 485,251 _RS19940 ABZR86_RS19945: ABZR86_RS19945 - PepSY domain-containing protein, at 485,642 to 486,070 _RS19945 ABZR86_RS19950: ABZR86_RS19950 - hypothetical protein, at 486,418 to 486,663 _RS19950 ABZR86_RS19955: ABZR86_RS19955 - type II toxin-antitoxin system HicB family antitoxin, at 486,719 to 487,147 _RS19955 Position (kb) 485 486 487Strain fitness (log2 ratio) -3 -2 -1 0 1at 484.677 kb on + strand, within ABZR86_RS19940at 484.677 kb on + strand, within ABZR86_RS19940at 484.677 kb on + strand, within ABZR86_RS19940at 484.678 kb on - strand, within ABZR86_RS19940at 484.683 kb on + strand, within ABZR86_RS19940at 484.684 kb on - strand, within ABZR86_RS19940at 484.684 kb on - strand, within ABZR86_RS19940at 484.684 kb on - strand, within ABZR86_RS19940at 484.684 kb on - strand, within ABZR86_RS19940at 484.684 kb on - strand, within ABZR86_RS19940at 484.684 kb on - strand, within ABZR86_RS19940at 484.699 kb on - strand, within ABZR86_RS19940at 484.699 kb on - strand, within ABZR86_RS19940at 484.699 kb on - strand, within ABZR86_RS19940at 484.699 kb on - strand, within ABZR86_RS19940at 484.699 kb on - strand, within ABZR86_RS19940at 484.701 kb on + strand, within ABZR86_RS19940at 484.701 kb on + strand, within ABZR86_RS19940at 484.701 kb on + strand, within ABZR86_RS19940at 484.701 kb on + strand, within ABZR86_RS19940at 484.701 kb on + strand, within ABZR86_RS19940at 484.702 kb on - strand, within ABZR86_RS19940at 484.702 kb on - strand, within ABZR86_RS19940at 484.702 kb on - strand, within ABZR86_RS19940at 484.790 kb on + strand, within ABZR86_RS19940at 484.790 kb on + strand, within ABZR86_RS19940at 484.790 kb on + strand, within ABZR86_RS19940at 484.940 kb on - strand, within ABZR86_RS19940at 485.064 kb on + strand, within ABZR86_RS19940at 485.065 kb on - strand, within ABZR86_RS19940at 485.079 kb on + strand, within ABZR86_RS19940at 485.080 kb on - strand, within ABZR86_RS19940at 485.258 kb on + strandat 485.258 kb on + strandat 485.258 kb on + strandat 485.285 kb on + strandat 485.286 kb on - strandat 485.413 kb on + strandat 485.413 kb on + strandat 485.566 kb on + strandat 485.566 kb on + strandat 485.567 kb on - strandat 485.567 kb on - strandat 485.570 kb on + strandat 485.570 kb on + strandat 485.571 kb on - strandat 485.571 kb on - strandat 485.571 kb on - strandat 485.571 kb on - strandat 485.571 kb on - strandat 485.571 kb on - strandat 485.571 kb on - strandat 485.571 kb on - strandat 485.643 kb on + strandat 485.766 kb on + strand, within ABZR86_RS19945at 485.767 kb on - strand, within ABZR86_RS19945at 485.944 kb on - strand, within ABZR86_RS19945at 486.111 kb on + strandat 486.112 kb on - strandat 486.254 kb on - strandat 486.364 kb on + strandat 486.364 kb on + strandat 486.382 kb on + strandat 486.382 kb on + strandat 486.382 kb on + strandat 486.383 kb on - strandat 486.389 kb on + strandat 486.389 kb on + strandat 486.389 kb on + strandat 486.390 kb on - strandat 486.390 kb on - strandat 486.390 kb on - strandat 486.440 kb on + strandat 486.441 kb on - strandat 486.441 kb on - strandat 486.441 kb on - strandat 486.441 kb on - strandat 486.441 kb on - strandat 486.497 kb on + strand, within ABZR86_RS19950at 486.497 kb on + strand, within ABZR86_RS19950at 486.498 kb on - strand, within ABZR86_RS19950at 486.720 kb on + strandat 486.792 kb on + strand, within ABZR86_RS19955at 486.793 kb on - strand, within ABZR86_RS19955at 486.793 kb on - strand, within ABZR86_RS19955at 486.793 kb on - strand, within ABZR86_RS19955at 486.793 kb on - strand, within ABZR86_RS19955at 486.836 kb on + strand, within ABZR86_RS19955at 486.837 kb on - strand, within ABZR86_RS19955at 486.868 kb on + strand, within ABZR86_RS19955at 486.868 kb on + strand, within ABZR86_RS19955at 486.868 kb on + strand, within ABZR86_RS19955at 486.868 kb on + strand, within ABZR86_RS19955at 486.869 kb on - strand, within ABZR86_RS19955at 486.869 kb on - strand, within ABZR86_RS19955at 486.869 kb on - strand, within ABZR86_RS19955at 486.869 kb on - strand, within ABZR86_RS19955at 486.869 kb on - strand, within ABZR86_RS19955

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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484,677 + ABZR86_RS19940 0.65 +1.2
484,677 + ABZR86_RS19940 0.65 +0.3
484,677 + ABZR86_RS19940 0.65 -0.5
484,678 - ABZR86_RS19940 0.65 +0.5
484,683 + ABZR86_RS19940 0.66 -0.6
484,684 - ABZR86_RS19940 0.66 -0.4
484,684 - ABZR86_RS19940 0.66 +0.9
484,684 - ABZR86_RS19940 0.66 +0.9
484,684 - ABZR86_RS19940 0.66 +1.0
484,684 - ABZR86_RS19940 0.66 +0.4
484,684 - ABZR86_RS19940 0.66 +0.9
484,699 - ABZR86_RS19940 0.67 +0.1
484,699 - ABZR86_RS19940 0.67 +1.2
484,699 - ABZR86_RS19940 0.67 +0.2
484,699 - ABZR86_RS19940 0.67 -0.1
484,699 - ABZR86_RS19940 0.67 -0.4
484,701 + ABZR86_RS19940 0.67 +0.9
484,701 + ABZR86_RS19940 0.67 +0.4
484,701 + ABZR86_RS19940 0.67 -0.1
484,701 + ABZR86_RS19940 0.67 -0.1
484,701 + ABZR86_RS19940 0.67 +0.1
484,702 - ABZR86_RS19940 0.67 +0.1
484,702 - ABZR86_RS19940 0.67 +0.1
484,702 - ABZR86_RS19940 0.67 +0.3
484,790 + ABZR86_RS19940 0.72 -1.9
484,790 + ABZR86_RS19940 0.72 +1.6
484,790 + ABZR86_RS19940 0.72 -0.0
484,940 - ABZR86_RS19940 0.81 +0.2
485,064 + ABZR86_RS19940 0.89 +0.2
485,065 - ABZR86_RS19940 0.89 +0.5
485,079 + ABZR86_RS19940 0.90 +0.6
485,080 - ABZR86_RS19940 0.90 +0.4
485,258 + +0.4
485,258 + -0.2
485,258 + +0.3
485,285 + -0.4
485,286 - +0.4
485,413 + +0.7
485,413 + +0.7
485,566 + -0.5
485,566 + +0.5
485,567 - -0.1
485,567 - +1.1
485,570 + -0.3
485,570 + +0.0
485,571 - -0.8
485,571 - -0.2
485,571 - -0.1
485,571 - +0.9
485,571 - -1.9
485,571 - +0.5
485,571 - -1.1
485,571 - +0.3
485,643 + +1.7
485,766 + ABZR86_RS19945 0.29 +0.3
485,767 - ABZR86_RS19945 0.29 +0.6
485,944 - ABZR86_RS19945 0.70 +0.2
486,111 + +0.7
486,112 - -0.5
486,254 - -0.8
486,364 + -0.6
486,364 + -0.6
486,382 + +0.6
486,382 + -0.0
486,382 + +0.0
486,383 - -1.3
486,389 + +0.6
486,389 + +1.7
486,389 + +0.1
486,390 - +0.9
486,390 - -3.5
486,390 - +0.3
486,440 + -0.8
486,441 - -0.4
486,441 - +0.3
486,441 - -0.3
486,441 - -0.1
486,441 - +0.8
486,497 + ABZR86_RS19950 0.32 -0.3
486,497 + ABZR86_RS19950 0.32 +0.6
486,498 - ABZR86_RS19950 0.33 -0.1
486,720 + -1.9
486,792 + ABZR86_RS19955 0.17 +0.9
486,793 - ABZR86_RS19955 0.17 +0.5
486,793 - ABZR86_RS19955 0.17 +0.5
486,793 - ABZR86_RS19955 0.17 +0.1
486,793 - ABZR86_RS19955 0.17 +0.3
486,836 + ABZR86_RS19955 0.27 +0.1
486,837 - ABZR86_RS19955 0.28 +0.6
486,868 + ABZR86_RS19955 0.35 -0.9
486,868 + ABZR86_RS19955 0.35 -2.2
486,868 + ABZR86_RS19955 0.35 -0.5
486,868 + ABZR86_RS19955 0.35 -0.0
486,869 - ABZR86_RS19955 0.35 -0.4
486,869 - ABZR86_RS19955 0.35 -0.2
486,869 - ABZR86_RS19955 0.35 -0.3
486,869 - ABZR86_RS19955 0.35 +0.5
486,869 - ABZR86_RS19955 0.35 +0.4

Or see this region's nucleotide sequence