Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS15460 and ABZR86_RS15465 are separated by 123 nucleotides ABZR86_RS15465 and ABZR86_RS15470 are separated by 137 nucleotides ABZR86_RS15470 and ABZR86_RS15475 are separated by 141 nucleotides ABZR86_RS15475 and ABZR86_RS15480 are separated by 52 nucleotides
ABZR86_RS15460: ABZR86_RS15460 - type I glutamate--ammonia ligase, at 3,479,352 to 3,480,761
_RS15460
ABZR86_RS15465: ABZR86_RS15465 - glutamine amidotransferase, at 3,480,885 to 3,481,580
_RS15465
ABZR86_RS15470: ABZR86_RS15470 - hypothetical protein, at 3,481,718 to 3,482,341
_RS15470
ABZR86_RS15475: ABZR86_RS15475 - hypothetical protein, at 3,482,483 to 3,482,842
_RS15475
ABZR86_RS15480: ABZR86_RS15480 - hypothetical protein, at 3,482,895 to 3,483,788
_RS15480
Position (kb)
3481
3482
3483 Strain fitness (log2 ratio)
-2
-1
0
1 at 3480.748 kb on - strand at 3480.748 kb on - strand at 3480.750 kb on + strand at 3480.849 kb on - strand at 3480.849 kb on - strand at 3480.849 kb on - strand at 3481.578 kb on + strand at 3481.615 kb on + strand at 3481.615 kb on + strand at 3481.664 kb on + strand at 3481.679 kb on - strand at 3481.711 kb on + strand at 3481.711 kb on + strand at 3481.712 kb on - strand at 3481.791 kb on + strand, within ABZR86_RS15470 at 3481.792 kb on - strand, within ABZR86_RS15470 at 3481.792 kb on - strand, within ABZR86_RS15470 at 3481.793 kb on + strand, within ABZR86_RS15470 at 3481.793 kb on + strand, within ABZR86_RS15470 at 3481.793 kb on + strand, within ABZR86_RS15470 at 3481.793 kb on + strand, within ABZR86_RS15470 at 3481.793 kb on + strand, within ABZR86_RS15470 at 3481.794 kb on - strand, within ABZR86_RS15470 at 3481.794 kb on - strand, within ABZR86_RS15470 at 3481.794 kb on - strand, within ABZR86_RS15470 at 3481.794 kb on - strand, within ABZR86_RS15470 at 3481.794 kb on - strand, within ABZR86_RS15470 at 3481.794 kb on - strand, within ABZR86_RS15470 at 3481.794 kb on - strand, within ABZR86_RS15470 at 3481.795 kb on + strand, within ABZR86_RS15470 at 3481.796 kb on - strand, within ABZR86_RS15470 at 3481.850 kb on + strand, within ABZR86_RS15470 at 3481.850 kb on + strand, within ABZR86_RS15470 at 3481.850 kb on + strand, within ABZR86_RS15470 at 3481.854 kb on + strand, within ABZR86_RS15470 at 3481.855 kb on - strand, within ABZR86_RS15470 at 3481.855 kb on - strand, within ABZR86_RS15470 at 3481.855 kb on - strand, within ABZR86_RS15470 at 3481.877 kb on + strand, within ABZR86_RS15470 at 3481.877 kb on + strand, within ABZR86_RS15470 at 3481.877 kb on + strand, within ABZR86_RS15470 at 3481.880 kb on + strand, within ABZR86_RS15470 at 3481.880 kb on + strand, within ABZR86_RS15470 at 3481.880 kb on + strand, within ABZR86_RS15470 at 3481.881 kb on - strand, within ABZR86_RS15470 at 3481.881 kb on - strand, within ABZR86_RS15470 at 3481.881 kb on - strand, within ABZR86_RS15470 at 3481.959 kb on + strand, within ABZR86_RS15470 at 3481.959 kb on + strand, within ABZR86_RS15470 at 3481.959 kb on + strand, within ABZR86_RS15470 at 3481.982 kb on + strand, within ABZR86_RS15470 at 3482.068 kb on + strand, within ABZR86_RS15470 at 3482.069 kb on - strand, within ABZR86_RS15470 at 3482.069 kb on - strand, within ABZR86_RS15470 at 3482.079 kb on - strand, within ABZR86_RS15470 at 3482.079 kb on - strand, within ABZR86_RS15470 at 3482.125 kb on + strand, within ABZR86_RS15470 at 3482.125 kb on + strand, within ABZR86_RS15470 at 3482.126 kb on - strand, within ABZR86_RS15470 at 3482.126 kb on - strand, within ABZR86_RS15470 at 3482.126 kb on - strand, within ABZR86_RS15470 at 3482.222 kb on + strand, within ABZR86_RS15470 at 3482.223 kb on - strand, within ABZR86_RS15470 at 3482.272 kb on - strand, within ABZR86_RS15470 at 3482.272 kb on - strand, within ABZR86_RS15470 at 3482.272 kb on - strand, within ABZR86_RS15470 at 3482.315 kb on + strand at 3482.316 kb on - strand at 3482.316 kb on - strand at 3482.316 kb on - strand at 3482.327 kb on + strand at 3482.371 kb on + strand at 3482.372 kb on - strand at 3482.499 kb on + strand at 3482.499 kb on + strand at 3482.499 kb on + strand at 3482.500 kb on - strand at 3482.512 kb on + strand at 3482.512 kb on + strand at 3482.512 kb on + strand at 3482.513 kb on - strand at 3482.513 kb on - strand at 3482.513 kb on - strand at 3482.549 kb on + strand, within ABZR86_RS15475 at 3482.549 kb on + strand, within ABZR86_RS15475 at 3482.549 kb on + strand, within ABZR86_RS15475 at 3482.549 kb on + strand, within ABZR86_RS15475 at 3482.550 kb on - strand, within ABZR86_RS15475 at 3482.636 kb on + strand, within ABZR86_RS15475 at 3482.637 kb on - strand, within ABZR86_RS15475 at 3482.648 kb on + strand, within ABZR86_RS15475 at 3482.682 kb on + strand, within ABZR86_RS15475 at 3482.683 kb on - strand, within ABZR86_RS15475 at 3482.683 kb on - strand, within ABZR86_RS15475 at 3482.697 kb on - strand, within ABZR86_RS15475 at 3482.736 kb on - strand, within ABZR86_RS15475 at 3482.741 kb on + strand, within ABZR86_RS15475 at 3482.741 kb on + strand, within ABZR86_RS15475 at 3482.741 kb on + strand, within ABZR86_RS15475 at 3482.742 kb on - strand, within ABZR86_RS15475 at 3482.742 kb on - strand, within ABZR86_RS15475 at 3482.742 kb on - strand, within ABZR86_RS15475 at 3482.742 kb on - strand, within ABZR86_RS15475 at 3482.744 kb on - strand, within ABZR86_RS15475 at 3482.777 kb on - strand, within ABZR86_RS15475 at 3482.778 kb on + strand, within ABZR86_RS15475 at 3482.813 kb on + strand at 3482.814 kb on - strand at 3482.814 kb on - strand at 3482.814 kb on - strand at 3482.825 kb on + strand at 3482.840 kb on + strand at 3483.013 kb on - strand, within ABZR86_RS15480 at 3483.085 kb on + strand, within ABZR86_RS15480 at 3483.097 kb on + strand, within ABZR86_RS15480 at 3483.097 kb on + strand, within ABZR86_RS15480 at 3483.098 kb on - strand, within ABZR86_RS15480 at 3483.098 kb on - strand, within ABZR86_RS15480 at 3483.127 kb on + strand, within ABZR86_RS15480 at 3483.144 kb on + strand, within ABZR86_RS15480 at 3483.204 kb on + strand, within ABZR86_RS15480 at 3483.204 kb on + strand, within ABZR86_RS15480 at 3483.205 kb on - strand, within ABZR86_RS15480 at 3483.205 kb on - strand, within ABZR86_RS15480 at 3483.205 kb on - strand, within ABZR86_RS15480 at 3483.205 kb on - strand, within ABZR86_RS15480 at 3483.207 kb on - strand, within ABZR86_RS15480 at 3483.207 kb on - strand, within ABZR86_RS15480 at 3483.211 kb on - strand, within ABZR86_RS15480 at 3483.238 kb on - strand, within ABZR86_RS15480 at 3483.244 kb on + strand, within ABZR86_RS15480 at 3483.245 kb on - strand, within ABZR86_RS15480 at 3483.285 kb on - strand, within ABZR86_RS15480 at 3483.285 kb on - strand, within ABZR86_RS15480
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 3,480,748 - -1.5 3,480,748 - -0.3 3,480,750 + -1.0 3,480,849 - +0.2 3,480,849 - -0.1 3,480,849 - -0.1 3,481,578 + +0.5 3,481,615 + -0.5 3,481,615 + -0.6 3,481,664 + +0.1 3,481,679 - +1.3 3,481,711 + -1.8 3,481,711 + -1.7 3,481,712 - -0.8 3,481,791 + ABZR86_RS15470 0.12 +0.4 3,481,792 - ABZR86_RS15470 0.12 +0.1 3,481,792 - ABZR86_RS15470 0.12 +0.3 3,481,793 + ABZR86_RS15470 0.12 +0.1 3,481,793 + ABZR86_RS15470 0.12 -0.4 3,481,793 + ABZR86_RS15470 0.12 +0.2 3,481,793 + ABZR86_RS15470 0.12 -0.2 3,481,793 + ABZR86_RS15470 0.12 +0.4 3,481,794 - ABZR86_RS15470 0.12 -0.4 3,481,794 - ABZR86_RS15470 0.12 +0.8 3,481,794 - ABZR86_RS15470 0.12 +0.5 3,481,794 - ABZR86_RS15470 0.12 +0.4 3,481,794 - ABZR86_RS15470 0.12 +0.5 3,481,794 - ABZR86_RS15470 0.12 +0.3 3,481,794 - ABZR86_RS15470 0.12 -0.5 3,481,795 + ABZR86_RS15470 0.12 -0.4 3,481,796 - ABZR86_RS15470 0.12 -0.1 3,481,850 + ABZR86_RS15470 0.21 +0.7 3,481,850 + ABZR86_RS15470 0.21 +0.7 3,481,850 + ABZR86_RS15470 0.21 -0.1 3,481,854 + ABZR86_RS15470 0.22 +0.4 3,481,855 - ABZR86_RS15470 0.22 +1.0 3,481,855 - ABZR86_RS15470 0.22 -0.1 3,481,855 - ABZR86_RS15470 0.22 +0.0 3,481,877 + ABZR86_RS15470 0.25 +0.5 3,481,877 + ABZR86_RS15470 0.25 +0.6 3,481,877 + ABZR86_RS15470 0.25 +0.6 3,481,880 + ABZR86_RS15470 0.26 +0.1 3,481,880 + ABZR86_RS15470 0.26 +0.9 3,481,880 + ABZR86_RS15470 0.26 +0.3 3,481,881 - ABZR86_RS15470 0.26 -0.1 3,481,881 - ABZR86_RS15470 0.26 -1.5 3,481,881 - ABZR86_RS15470 0.26 +0.1 3,481,959 + ABZR86_RS15470 0.39 -0.1 3,481,959 + ABZR86_RS15470 0.39 +0.6 3,481,959 + ABZR86_RS15470 0.39 -0.9 3,481,982 + ABZR86_RS15470 0.42 +0.2 3,482,068 + ABZR86_RS15470 0.56 -0.5 3,482,069 - ABZR86_RS15470 0.56 -0.1 3,482,069 - ABZR86_RS15470 0.56 +0.2 3,482,079 - ABZR86_RS15470 0.58 -1.3 3,482,079 - ABZR86_RS15470 0.58 -0.3 3,482,125 + ABZR86_RS15470 0.65 -0.6 3,482,125 + ABZR86_RS15470 0.65 +0.5 3,482,126 - ABZR86_RS15470 0.65 +1.7 3,482,126 - ABZR86_RS15470 0.65 +0.2 3,482,126 - ABZR86_RS15470 0.65 +0.3 3,482,222 + ABZR86_RS15470 0.81 +0.8 3,482,223 - ABZR86_RS15470 0.81 -1.8 3,482,272 - ABZR86_RS15470 0.89 -0.8 3,482,272 - ABZR86_RS15470 0.89 -0.5 3,482,272 - ABZR86_RS15470 0.89 +0.7 3,482,315 + +0.5 3,482,316 - -0.9 3,482,316 - -0.6 3,482,316 - -0.4 3,482,327 + -0.2 3,482,371 + +0.5 3,482,372 - -0.3 3,482,499 + +0.3 3,482,499 + +0.6 3,482,499 + -0.3 3,482,500 - +0.8 3,482,512 + -0.1 3,482,512 + +0.3 3,482,512 + -0.8 3,482,513 - +0.0 3,482,513 - -0.2 3,482,513 - -0.9 3,482,549 + ABZR86_RS15475 0.18 +0.3 3,482,549 + ABZR86_RS15475 0.18 -0.4 3,482,549 + ABZR86_RS15475 0.18 +0.1 3,482,549 + ABZR86_RS15475 0.18 -0.9 3,482,550 - ABZR86_RS15475 0.19 -0.1 3,482,636 + ABZR86_RS15475 0.42 +0.5 3,482,637 - ABZR86_RS15475 0.43 -0.3 3,482,648 + ABZR86_RS15475 0.46 +1.1 3,482,682 + ABZR86_RS15475 0.55 -0.3 3,482,683 - ABZR86_RS15475 0.56 +0.0 3,482,683 - ABZR86_RS15475 0.56 +0.4 3,482,697 - ABZR86_RS15475 0.59 -0.5 3,482,736 - ABZR86_RS15475 0.70 +0.3 3,482,741 + ABZR86_RS15475 0.72 +0.4 3,482,741 + ABZR86_RS15475 0.72 -0.3 3,482,741 + ABZR86_RS15475 0.72 -0.2 3,482,742 - ABZR86_RS15475 0.72 -0.0 3,482,742 - ABZR86_RS15475 0.72 -0.2 3,482,742 - ABZR86_RS15475 0.72 -0.0 3,482,742 - ABZR86_RS15475 0.72 -1.5 3,482,744 - ABZR86_RS15475 0.72 +0.8 3,482,777 - ABZR86_RS15475 0.82 -0.1 3,482,778 + ABZR86_RS15475 0.82 -1.8 3,482,813 + -0.4 3,482,814 - -0.2 3,482,814 - +0.3 3,482,814 - -0.5 3,482,825 + -0.3 3,482,840 + -0.6 3,483,013 - ABZR86_RS15480 0.13 -0.1 3,483,085 + ABZR86_RS15480 0.21 +0.3 3,483,097 + ABZR86_RS15480 0.23 -0.0 3,483,097 + ABZR86_RS15480 0.23 -0.1 3,483,098 - ABZR86_RS15480 0.23 +0.3 3,483,098 - ABZR86_RS15480 0.23 -0.7 3,483,127 + ABZR86_RS15480 0.26 -0.5 3,483,144 + ABZR86_RS15480 0.28 -0.5 3,483,204 + ABZR86_RS15480 0.35 +1.6 3,483,204 + ABZR86_RS15480 0.35 -0.2 3,483,205 - ABZR86_RS15480 0.35 +0.1 3,483,205 - ABZR86_RS15480 0.35 -1.0 3,483,205 - ABZR86_RS15480 0.35 -0.7 3,483,205 - ABZR86_RS15480 0.35 -0.4 3,483,207 - ABZR86_RS15480 0.35 -0.4 3,483,207 - ABZR86_RS15480 0.35 -0.4 3,483,211 - ABZR86_RS15480 0.35 +0.5 3,483,238 - ABZR86_RS15480 0.38 +0.1 3,483,244 + ABZR86_RS15480 0.39 +0.7 3,483,245 - ABZR86_RS15480 0.39 -0.6 3,483,285 - ABZR86_RS15480 0.44 +0.4 3,483,285 - ABZR86_RS15480 0.44 -0.0
Or see this region's nucleotide sequence