Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS10985

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS10980 and ABZR86_RS10985 are separated by 91 nucleotidesABZR86_RS10985 and ABZR86_RS10990 are separated by 327 nucleotides ABZR86_RS10980: ABZR86_RS10980 - NAD+ synthase, at 2,438,721 to 2,440,352 _RS10980 ABZR86_RS10985: ABZR86_RS10985 - LysE/ArgO family amino acid transporter, at 2,440,444 to 2,441,061 _RS10985 ABZR86_RS10990: ABZR86_RS10990 - LysR family transcriptional regulator ArgP, at 2,441,389 to 2,442,291 _RS10990 Position (kb) 2440 2441 2442Strain fitness (log2 ratio) -2 -1 0 1at 2440.387 kb on + strandat 2440.387 kb on + strandat 2440.565 kb on + strand, within ABZR86_RS10985at 2440.565 kb on + strand, within ABZR86_RS10985at 2440.640 kb on + strand, within ABZR86_RS10985at 2440.640 kb on + strand, within ABZR86_RS10985at 2440.640 kb on + strand, within ABZR86_RS10985at 2440.640 kb on + strand, within ABZR86_RS10985at 2440.641 kb on - strand, within ABZR86_RS10985at 2440.641 kb on - strand, within ABZR86_RS10985at 2440.641 kb on - strand, within ABZR86_RS10985at 2440.641 kb on - strand, within ABZR86_RS10985at 2440.682 kb on + strand, within ABZR86_RS10985at 2440.682 kb on + strand, within ABZR86_RS10985at 2440.682 kb on + strand, within ABZR86_RS10985at 2440.682 kb on + strand, within ABZR86_RS10985at 2440.682 kb on + strand, within ABZR86_RS10985at 2440.682 kb on + strand, within ABZR86_RS10985at 2440.812 kb on - strand, within ABZR86_RS10985at 2440.838 kb on + strand, within ABZR86_RS10985at 2441.046 kb on - strandat 2441.067 kb on + strandat 2441.067 kb on + strandat 2441.068 kb on - strandat 2441.068 kb on - strandat 2441.190 kb on - strandat 2442.052 kb on + strand, within ABZR86_RS10990at 2442.052 kb on + strand, within ABZR86_RS10990at 2442.053 kb on - strand, within ABZR86_RS10990at 2442.053 kb on - strand, within ABZR86_RS10990at 2442.053 kb on - strand, within ABZR86_RS10990at 2442.053 kb on - strand, within ABZR86_RS10990at 2442.053 kb on - strand, within ABZR86_RS10990at 2442.053 kb on - strand, within ABZR86_RS10990at 2442.053 kb on - strand, within ABZR86_RS10990

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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2,440,387 + +0.5
2,440,387 + -1.6
2,440,565 + ABZR86_RS10985 0.20 +0.2
2,440,565 + ABZR86_RS10985 0.20 -0.0
2,440,640 + ABZR86_RS10985 0.32 -0.2
2,440,640 + ABZR86_RS10985 0.32 +0.1
2,440,640 + ABZR86_RS10985 0.32 -0.3
2,440,640 + ABZR86_RS10985 0.32 +0.6
2,440,641 - ABZR86_RS10985 0.32 -1.0
2,440,641 - ABZR86_RS10985 0.32 -0.3
2,440,641 - ABZR86_RS10985 0.32 +0.2
2,440,641 - ABZR86_RS10985 0.32 -0.6
2,440,682 + ABZR86_RS10985 0.39 -0.2
2,440,682 + ABZR86_RS10985 0.39 -0.0
2,440,682 + ABZR86_RS10985 0.39 +0.4
2,440,682 + ABZR86_RS10985 0.39 -0.2
2,440,682 + ABZR86_RS10985 0.39 +0.4
2,440,682 + ABZR86_RS10985 0.39 -1.2
2,440,812 - ABZR86_RS10985 0.60 +0.1
2,440,838 + ABZR86_RS10985 0.64 +0.6
2,441,046 - -2.4
2,441,067 + -0.0
2,441,067 + +0.5
2,441,068 - -0.2
2,441,068 - +0.1
2,441,190 - -0.1
2,442,052 + ABZR86_RS10990 0.73 +1.1
2,442,052 + ABZR86_RS10990 0.73 +0.9
2,442,053 - ABZR86_RS10990 0.74 -0.9
2,442,053 - ABZR86_RS10990 0.74 -0.4
2,442,053 - ABZR86_RS10990 0.74 -0.6
2,442,053 - ABZR86_RS10990 0.74 -0.2
2,442,053 - ABZR86_RS10990 0.74 +0.8
2,442,053 - ABZR86_RS10990 0.74 +1.0
2,442,053 - ABZR86_RS10990 0.74 +0.3

Or see this region's nucleotide sequence