Strain Fitness in Dyella japonica UNC79MFTsu3.2 around ABZR86_RS09310

Experiment: D-Maltose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR86_RS09300 and ABZR86_RS09305 are separated by 287 nucleotidesABZR86_RS09305 and ABZR86_RS09310 overlap by 4 nucleotidesABZR86_RS09310 and ABZR86_RS09315 are separated by 208 nucleotidesABZR86_RS09315 and ABZR86_RS09320 are separated by 180 nucleotides ABZR86_RS09300: ABZR86_RS09300 - C40 family peptidase, at 2,072,218 to 2,072,850 _RS09300 ABZR86_RS09305: ABZR86_RS09305 - YggS family pyridoxal phosphate-dependent enzyme, at 2,073,138 to 2,073,833 _RS09305 ABZR86_RS09310: ABZR86_RS09310 - M20 family metallopeptidase, at 2,073,830 to 2,075,254 _RS09310 ABZR86_RS09315: ABZR86_RS09315 - helix-hairpin-helix domain-containing protein, at 2,075,463 to 2,075,786 _RS09315 ABZR86_RS09320: ABZR86_RS09320 - SET domain-containing protein, at 2,075,967 to 2,076,443 _RS09320 Position (kb) 2073 2074 2075 2076Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2072.924 kb on + strandat 2072.924 kb on + strandat 2072.924 kb on + strandat 2072.925 kb on - strandat 2072.937 kb on + strandat 2072.937 kb on + strandat 2072.937 kb on + strandat 2072.937 kb on + strandat 2072.937 kb on + strandat 2072.937 kb on + strandat 2072.937 kb on + strandat 2072.938 kb on - strandat 2072.938 kb on - strandat 2072.938 kb on - strandat 2072.938 kb on - strandat 2072.944 kb on + strandat 2072.944 kb on + strandat 2072.944 kb on + strandat 2072.944 kb on + strandat 2072.944 kb on + strandat 2072.944 kb on + strandat 2072.944 kb on + strandat 2072.944 kb on + strandat 2072.945 kb on - strandat 2072.945 kb on - strandat 2072.945 kb on - strandat 2072.945 kb on - strandat 2072.945 kb on - strandat 2072.945 kb on - strandat 2072.964 kb on + strandat 2072.964 kb on + strandat 2072.964 kb on + strandat 2072.964 kb on + strandat 2072.964 kb on + strandat 2072.965 kb on - strandat 2072.965 kb on - strandat 2073.074 kb on + strandat 2073.074 kb on + strandat 2073.074 kb on + strandat 2073.075 kb on - strandat 2073.107 kb on + strandat 2073.139 kb on + strandat 2073.820 kb on + strandat 2073.820 kb on + strandat 2074.035 kb on + strand, within ABZR86_RS09310at 2074.036 kb on - strand, within ABZR86_RS09310at 2074.056 kb on + strand, within ABZR86_RS09310at 2074.057 kb on - strand, within ABZR86_RS09310at 2074.057 kb on - strand, within ABZR86_RS09310at 2074.057 kb on - strand, within ABZR86_RS09310at 2074.057 kb on - strand, within ABZR86_RS09310at 2074.407 kb on + strand, within ABZR86_RS09310at 2074.407 kb on + strand, within ABZR86_RS09310at 2074.407 kb on + strand, within ABZR86_RS09310at 2074.408 kb on - strand, within ABZR86_RS09310at 2074.411 kb on + strand, within ABZR86_RS09310at 2074.412 kb on - strand, within ABZR86_RS09310at 2074.476 kb on + strand, within ABZR86_RS09310at 2074.476 kb on + strand, within ABZR86_RS09310at 2074.476 kb on + strand, within ABZR86_RS09310at 2074.477 kb on - strand, within ABZR86_RS09310at 2074.477 kb on - strand, within ABZR86_RS09310at 2074.665 kb on + strand, within ABZR86_RS09310at 2074.665 kb on + strand, within ABZR86_RS09310at 2074.665 kb on + strand, within ABZR86_RS09310at 2074.665 kb on + strand, within ABZR86_RS09310at 2074.665 kb on + strand, within ABZR86_RS09310at 2074.666 kb on - strand, within ABZR86_RS09310at 2074.737 kb on + strand, within ABZR86_RS09310at 2074.737 kb on + strand, within ABZR86_RS09310at 2074.737 kb on + strand, within ABZR86_RS09310at 2074.738 kb on - strand, within ABZR86_RS09310at 2074.738 kb on - strand, within ABZR86_RS09310at 2074.738 kb on - strand, within ABZR86_RS09310at 2074.738 kb on - strand, within ABZR86_RS09310at 2074.738 kb on - strand, within ABZR86_RS09310at 2074.738 kb on - strand, within ABZR86_RS09310at 2074.738 kb on - strand, within ABZR86_RS09310at 2074.740 kb on + strand, within ABZR86_RS09310at 2074.740 kb on + strand, within ABZR86_RS09310at 2074.741 kb on - strand, within ABZR86_RS09310at 2074.752 kb on + strand, within ABZR86_RS09310at 2074.752 kb on + strand, within ABZR86_RS09310at 2074.753 kb on - strand, within ABZR86_RS09310at 2074.753 kb on - strand, within ABZR86_RS09310at 2074.753 kb on - strand, within ABZR86_RS09310at 2074.753 kb on - strand, within ABZR86_RS09310at 2074.753 kb on - strand, within ABZR86_RS09310at 2074.807 kb on + strand, within ABZR86_RS09310at 2074.807 kb on + strand, within ABZR86_RS09310at 2074.807 kb on + strand, within ABZR86_RS09310at 2074.807 kb on + strand, within ABZR86_RS09310at 2074.807 kb on + strand, within ABZR86_RS09310at 2074.807 kb on + strand, within ABZR86_RS09310at 2074.807 kb on + strand, within ABZR86_RS09310at 2074.807 kb on + strand, within ABZR86_RS09310at 2074.858 kb on - strand, within ABZR86_RS09310at 2074.858 kb on - strand, within ABZR86_RS09310at 2074.884 kb on + strand, within ABZR86_RS09310at 2074.885 kb on - strand, within ABZR86_RS09310at 2074.972 kb on - strand, within ABZR86_RS09310at 2074.972 kb on - strand, within ABZR86_RS09310at 2075.013 kb on + strand, within ABZR86_RS09310at 2075.013 kb on + strand, within ABZR86_RS09310at 2075.013 kb on + strand, within ABZR86_RS09310at 2075.013 kb on + strand, within ABZR86_RS09310at 2075.014 kb on - strand, within ABZR86_RS09310at 2075.124 kb on + strandat 2075.124 kb on + strandat 2075.125 kb on - strandat 2075.125 kb on - strandat 2075.125 kb on - strandat 2075.181 kb on + strandat 2075.182 kb on - strandat 2075.182 kb on - strandat 2075.182 kb on - strandat 2075.182 kb on - strandat 2075.182 kb on - strandat 2075.182 kb on - strandat 2075.182 kb on - strandat 2075.289 kb on + strandat 2075.289 kb on + strandat 2075.290 kb on - strandat 2075.350 kb on + strandat 2075.350 kb on + strandat 2075.351 kb on - strandat 2075.784 kb on + strandat 2075.784 kb on + strandat 2075.784 kb on + strandat 2075.785 kb on - strandat 2075.785 kb on - strandat 2075.859 kb on + strandat 2075.859 kb on + strandat 2075.860 kb on - strandat 2075.929 kb on + strandat 2075.929 kb on + strandat 2075.929 kb on + strandat 2075.929 kb on + strandat 2075.929 kb on + strandat 2075.929 kb on + strandat 2075.929 kb on + strandat 2075.929 kb on + strandat 2075.929 kb on + strandat 2075.929 kb on + strandat 2075.929 kb on + strandat 2075.929 kb on + strandat 2075.930 kb on - strandat 2075.930 kb on - strandat 2075.930 kb on - strandat 2076.139 kb on - strand, within ABZR86_RS09320at 2076.139 kb on - strand, within ABZR86_RS09320at 2076.168 kb on + strand, within ABZR86_RS09320at 2076.201 kb on + strand, within ABZR86_RS09320at 2076.201 kb on + strand, within ABZR86_RS09320at 2076.201 kb on + strand, within ABZR86_RS09320at 2076.202 kb on - strand, within ABZR86_RS09320at 2076.202 kb on - strand, within ABZR86_RS09320at 2076.202 kb on - strand, within ABZR86_RS09320at 2076.202 kb on - strand, within ABZR86_RS09320at 2076.202 kb on - strand, within ABZR86_RS09320at 2076.202 kb on - strand, within ABZR86_RS09320at 2076.202 kb on - strand, within ABZR86_RS09320at 2076.202 kb on - strand, within ABZR86_RS09320at 2076.202 kb on - strand, within ABZR86_RS09320at 2076.202 kb on - strand, within ABZR86_RS09320

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Maltose (C)
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2,072,924 + -0.2
2,072,924 + +0.8
2,072,924 + +0.9
2,072,925 - -0.0
2,072,937 + -2.0
2,072,937 + +0.1
2,072,937 + +0.7
2,072,937 + +0.5
2,072,937 + +0.5
2,072,937 + +0.9
2,072,937 + +0.2
2,072,938 - +0.2
2,072,938 - -1.0
2,072,938 - -0.2
2,072,938 - -0.2
2,072,944 + +0.4
2,072,944 + +0.6
2,072,944 + -0.5
2,072,944 + -0.4
2,072,944 + +0.2
2,072,944 + -0.2
2,072,944 + +0.2
2,072,944 + +0.1
2,072,945 - +1.7
2,072,945 - +0.2
2,072,945 - +1.0
2,072,945 - +1.4
2,072,945 - +0.7
2,072,945 - +1.1
2,072,964 + -0.1
2,072,964 + +0.7
2,072,964 + +0.6
2,072,964 + -0.1
2,072,964 + -0.8
2,072,965 - +0.6
2,072,965 - -0.4
2,073,074 + -0.5
2,073,074 + +0.5
2,073,074 + +0.4
2,073,075 - -2.2
2,073,107 + +0.8
2,073,139 + +0.5
2,073,820 + +0.6
2,073,820 + -0.3
2,074,035 + ABZR86_RS09310 0.14 +1.2
2,074,036 - ABZR86_RS09310 0.14 +0.8
2,074,056 + ABZR86_RS09310 0.16 -0.2
2,074,057 - ABZR86_RS09310 0.16 +0.9
2,074,057 - ABZR86_RS09310 0.16 -1.2
2,074,057 - ABZR86_RS09310 0.16 +0.8
2,074,057 - ABZR86_RS09310 0.16 -3.1
2,074,407 + ABZR86_RS09310 0.40 +0.1
2,074,407 + ABZR86_RS09310 0.40 +0.0
2,074,407 + ABZR86_RS09310 0.40 -0.5
2,074,408 - ABZR86_RS09310 0.41 -0.4
2,074,411 + ABZR86_RS09310 0.41 -0.9
2,074,412 - ABZR86_RS09310 0.41 -0.4
2,074,476 + ABZR86_RS09310 0.45 -0.5
2,074,476 + ABZR86_RS09310 0.45 +0.6
2,074,476 + ABZR86_RS09310 0.45 +1.4
2,074,477 - ABZR86_RS09310 0.45 -1.3
2,074,477 - ABZR86_RS09310 0.45 -0.7
2,074,665 + ABZR86_RS09310 0.59 -0.5
2,074,665 + ABZR86_RS09310 0.59 -1.2
2,074,665 + ABZR86_RS09310 0.59 -0.3
2,074,665 + ABZR86_RS09310 0.59 -1.3
2,074,665 + ABZR86_RS09310 0.59 +1.1
2,074,666 - ABZR86_RS09310 0.59 +1.6
2,074,737 + ABZR86_RS09310 0.64 +0.0
2,074,737 + ABZR86_RS09310 0.64 -0.3
2,074,737 + ABZR86_RS09310 0.64 -1.0
2,074,738 - ABZR86_RS09310 0.64 -1.1
2,074,738 - ABZR86_RS09310 0.64 +1.5
2,074,738 - ABZR86_RS09310 0.64 -0.5
2,074,738 - ABZR86_RS09310 0.64 +0.3
2,074,738 - ABZR86_RS09310 0.64 -0.2
2,074,738 - ABZR86_RS09310 0.64 +0.3
2,074,738 - ABZR86_RS09310 0.64 -0.3
2,074,740 + ABZR86_RS09310 0.64 -0.3
2,074,740 + ABZR86_RS09310 0.64 -0.7
2,074,741 - ABZR86_RS09310 0.64 +1.4
2,074,752 + ABZR86_RS09310 0.65 -1.5
2,074,752 + ABZR86_RS09310 0.65 -0.6
2,074,753 - ABZR86_RS09310 0.65 -2.0
2,074,753 - ABZR86_RS09310 0.65 +1.4
2,074,753 - ABZR86_RS09310 0.65 -1.3
2,074,753 - ABZR86_RS09310 0.65 -0.3
2,074,753 - ABZR86_RS09310 0.65 -0.7
2,074,807 + ABZR86_RS09310 0.69 -0.8
2,074,807 + ABZR86_RS09310 0.69 +1.4
2,074,807 + ABZR86_RS09310 0.69 -0.3
2,074,807 + ABZR86_RS09310 0.69 -0.1
2,074,807 + ABZR86_RS09310 0.69 -0.9
2,074,807 + ABZR86_RS09310 0.69 -0.9
2,074,807 + ABZR86_RS09310 0.69 +0.8
2,074,807 + ABZR86_RS09310 0.69 -0.2
2,074,858 - ABZR86_RS09310 0.72 -0.7
2,074,858 - ABZR86_RS09310 0.72 -1.0
2,074,884 + ABZR86_RS09310 0.74 -0.7
2,074,885 - ABZR86_RS09310 0.74 -0.9
2,074,972 - ABZR86_RS09310 0.80 -2.4
2,074,972 - ABZR86_RS09310 0.80 -0.6
2,075,013 + ABZR86_RS09310 0.83 -0.1
2,075,013 + ABZR86_RS09310 0.83 +0.2
2,075,013 + ABZR86_RS09310 0.83 +0.5
2,075,013 + ABZR86_RS09310 0.83 +0.8
2,075,014 - ABZR86_RS09310 0.83 -0.1
2,075,124 + -0.2
2,075,124 + +0.8
2,075,125 - -0.9
2,075,125 - -0.5
2,075,125 - +0.6
2,075,181 + -0.2
2,075,182 - +0.3
2,075,182 - -0.1
2,075,182 - -0.7
2,075,182 - -0.6
2,075,182 - -0.8
2,075,182 - +0.2
2,075,182 - -0.2
2,075,289 + +0.6
2,075,289 + +2.8
2,075,290 - +0.0
2,075,350 + +0.8
2,075,350 + +0.2
2,075,351 - -0.1
2,075,784 + -1.2
2,075,784 + +0.3
2,075,784 + +0.5
2,075,785 - -0.5
2,075,785 - -0.4
2,075,859 + +0.2
2,075,859 + +0.4
2,075,860 - +0.1
2,075,929 + +0.6
2,075,929 + +1.2
2,075,929 + +1.1
2,075,929 + +2.2
2,075,929 + +0.0
2,075,929 + -0.6
2,075,929 + -1.2
2,075,929 + +0.4
2,075,929 + +0.4
2,075,929 + +0.3
2,075,929 + +0.3
2,075,929 + +0.0
2,075,930 - -1.4
2,075,930 - +0.1
2,075,930 - +0.0
2,076,139 - ABZR86_RS09320 0.36 -0.2
2,076,139 - ABZR86_RS09320 0.36 +0.8
2,076,168 + ABZR86_RS09320 0.42 +0.8
2,076,201 + ABZR86_RS09320 0.49 -0.4
2,076,201 + ABZR86_RS09320 0.49 -0.2
2,076,201 + ABZR86_RS09320 0.49 -0.3
2,076,202 - ABZR86_RS09320 0.49 +0.8
2,076,202 - ABZR86_RS09320 0.49 +0.2
2,076,202 - ABZR86_RS09320 0.49 +0.1
2,076,202 - ABZR86_RS09320 0.49 +1.5
2,076,202 - ABZR86_RS09320 0.49 +0.8
2,076,202 - ABZR86_RS09320 0.49 +0.7
2,076,202 - ABZR86_RS09320 0.49 -2.5
2,076,202 - ABZR86_RS09320 0.49 -1.2
2,076,202 - ABZR86_RS09320 0.49 -0.4
2,076,202 - ABZR86_RS09320 0.49 +0.6

Or see this region's nucleotide sequence