Experiment: D-Maltose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR86_RS00570 and ABZR86_RS00575 are separated by 175 nucleotides ABZR86_RS00575 and ABZR86_RS00580 are separated by 116 nucleotides
ABZR86_RS00570: ABZR86_RS00570 - acetoacetyl-CoA reductase, at 107,711 to 108,451
_RS00570
ABZR86_RS00575: ABZR86_RS00575 - tRNA glutamyl-Q(34) synthetase GluQRS, at 108,627 to 109,493
_RS00575
ABZR86_RS00580: ABZR86_RS00580 - protease HtpX, at 109,610 to 110,500
_RS00580
Position (kb)
108
109
110 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 107.633 kb on + strand at 107.634 kb on - strand at 107.669 kb on + strand at 107.670 kb on - strand at 107.670 kb on - strand at 107.670 kb on - strand at 107.712 kb on + strand at 107.712 kb on + strand at 107.712 kb on + strand at 107.712 kb on + strand at 107.713 kb on - strand at 107.713 kb on - strand at 107.713 kb on - strand at 107.713 kb on - strand at 107.713 kb on - strand at 107.713 kb on - strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.724 kb on + strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.725 kb on - strand at 107.997 kb on + strand, within ABZR86_RS00570 at 108.013 kb on - strand, within ABZR86_RS00570 at 108.150 kb on + strand, within ABZR86_RS00570 at 108.151 kb on - strand, within ABZR86_RS00570 at 108.151 kb on - strand, within ABZR86_RS00570 at 108.352 kb on - strand, within ABZR86_RS00570 at 108.388 kb on - strand at 108.457 kb on + strand at 108.457 kb on + strand at 108.457 kb on + strand at 108.458 kb on - strand at 108.458 kb on - strand at 108.458 kb on - strand at 108.465 kb on + strand at 108.466 kb on - strand at 108.466 kb on - strand at 108.466 kb on - strand at 108.466 kb on - strand at 108.542 kb on - strand at 108.595 kb on + strand at 108.596 kb on - strand at 108.596 kb on - strand at 108.597 kb on + strand at 108.597 kb on + strand at 108.605 kb on + strand at 108.856 kb on + strand, within ABZR86_RS00575 at 108.857 kb on - strand, within ABZR86_RS00575 at 108.985 kb on + strand, within ABZR86_RS00575 at 108.986 kb on - strand, within ABZR86_RS00575 at 108.991 kb on + strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 108.992 kb on - strand, within ABZR86_RS00575 at 109.250 kb on - strand, within ABZR86_RS00575 at 109.486 kb on + strand at 109.487 kb on - strand at 109.487 kb on - strand at 109.504 kb on + strand at 109.504 kb on + strand at 109.504 kb on + strand at 109.557 kb on + strand at 109.636 kb on + strand at 109.636 kb on + strand at 109.636 kb on + strand at 109.637 kb on - strand at 109.743 kb on - strand, within ABZR86_RS00580 at 109.743 kb on - strand, within ABZR86_RS00580 at 109.743 kb on - strand, within ABZR86_RS00580 at 109.743 kb on - strand, within ABZR86_RS00580 at 109.926 kb on - strand, within ABZR86_RS00580 at 109.926 kb on - strand, within ABZR86_RS00580 at 110.110 kb on + strand, within ABZR86_RS00580 at 110.111 kb on - strand, within ABZR86_RS00580 at 110.205 kb on - strand, within ABZR86_RS00580 at 110.205 kb on - strand, within ABZR86_RS00580
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose (C) remove 107,633 + -0.0 107,634 - +0.3 107,669 + +0.8 107,670 - +1.5 107,670 - -0.2 107,670 - -1.3 107,712 + +0.9 107,712 + -1.2 107,712 + +0.1 107,712 + -0.3 107,713 - -2.0 107,713 - -0.2 107,713 - -0.7 107,713 - +0.4 107,713 - +0.1 107,713 - +1.3 107,724 + -1.1 107,724 + -1.1 107,724 + -0.9 107,724 + -0.9 107,724 + +0.1 107,724 + -0.8 107,724 + -0.2 107,724 + -0.2 107,724 + -1.0 107,724 + +0.2 107,724 + -0.1 107,725 - -0.4 107,725 - -0.8 107,725 - -0.8 107,725 - -1.0 107,725 - +0.6 107,725 - +0.2 107,725 - -0.3 107,725 - -0.2 107,997 + ABZR86_RS00570 0.39 -3.2 108,013 - ABZR86_RS00570 0.41 -2.4 108,150 + ABZR86_RS00570 0.59 -2.6 108,151 - ABZR86_RS00570 0.59 -1.3 108,151 - ABZR86_RS00570 0.59 -3.0 108,352 - ABZR86_RS00570 0.87 -2.0 108,388 - -0.9 108,457 + -1.6 108,457 + -0.3 108,457 + -0.7 108,458 - -1.4 108,458 - -0.6 108,458 - -1.0 108,465 + +0.1 108,466 - -0.4 108,466 - -0.1 108,466 - +1.4 108,466 - +0.8 108,542 - -0.1 108,595 + -0.5 108,596 - +2.4 108,596 - -0.1 108,597 + -1.0 108,597 + +0.3 108,605 + -1.3 108,856 + ABZR86_RS00575 0.26 +0.6 108,857 - ABZR86_RS00575 0.27 +0.1 108,985 + ABZR86_RS00575 0.41 +0.2 108,986 - ABZR86_RS00575 0.41 +0.1 108,991 + ABZR86_RS00575 0.42 +1.3 108,992 - ABZR86_RS00575 0.42 -2.0 108,992 - ABZR86_RS00575 0.42 -0.5 108,992 - ABZR86_RS00575 0.42 -0.7 108,992 - ABZR86_RS00575 0.42 +0.5 108,992 - ABZR86_RS00575 0.42 +0.3 108,992 - ABZR86_RS00575 0.42 -0.5 109,250 - ABZR86_RS00575 0.72 +1.8 109,486 + +0.7 109,487 - -0.4 109,487 - +0.7 109,504 + +0.0 109,504 + -1.0 109,504 + -0.5 109,557 + -0.0 109,636 + -0.5 109,636 + +0.3 109,636 + +0.3 109,637 - +0.2 109,743 - ABZR86_RS00580 0.15 +0.2 109,743 - ABZR86_RS00580 0.15 -0.0 109,743 - ABZR86_RS00580 0.15 +1.7 109,743 - ABZR86_RS00580 0.15 -1.3 109,926 - ABZR86_RS00580 0.35 +1.0 109,926 - ABZR86_RS00580 0.35 +0.1 110,110 + ABZR86_RS00580 0.56 -0.8 110,111 - ABZR86_RS00580 0.56 +0.5 110,205 - ABZR86_RS00580 0.67 +0.4 110,205 - ABZR86_RS00580 0.67 -0.0
Or see this region's nucleotide sequence