Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS13555

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
3,386,572	-		CA265_RS13550	0.63	+1.4
3,386,586	-		CA265_RS13550	0.64	-0.1
3,386,644	-		CA265_RS13550	0.66	-0.4
3,386,671	-		CA265_RS13550	0.67	+1.0
3,386,759	+		CA265_RS13550	0.70	+1.3
3,386,760	-		CA265_RS13550	0.70	-0.9
3,386,811	+		CA265_RS13550	0.72	+1.0
3,386,812	-		CA265_RS13550	0.73	-0.2
3,386,812	-		CA265_RS13550	0.73	+1.0
3,386,855	-		CA265_RS13550	0.74	+0.1
3,386,855	-		CA265_RS13550	0.74	+0.3
3,386,856	-		CA265_RS13550	0.74	-0.3
3,386,891	+		CA265_RS13550	0.76	+2.3
3,386,891	+		CA265_RS13550	0.76	-0.2
3,386,892	-		CA265_RS13550	0.76	+0.2
3,386,917	-		CA265_RS13550	0.77	+0.4
3,387,157	+		CA265_RS13550	0.86	+0.4
3,387,278	+				+0.3
3,387,282	+				-0.1
3,387,324	-				+0.2
3,387,427	+				-1.1
3,387,428	-				-0.3
3,387,466	-				+1.4
3,387,546	-				-0.4
3,387,557	-		CA265_RS13555	0.12	+0.0
3,387,576	+		CA265_RS13555	0.17	+1.4
3,387,596	+		CA265_RS13555	0.22	-0.4
3,387,625	-		CA265_RS13555	0.30	+0.4
3,387,625	-		CA265_RS13555	0.30	-1.4
3,387,683	-		CA265_RS13555	0.46	+0.4
3,387,683	-		CA265_RS13555	0.46	+0.4
3,387,694	-		CA265_RS13555	0.48	+1.1
3,387,697	-		CA265_RS13555	0.49	+0.4
3,387,738	-		CA265_RS13555	0.60	+0.7
3,387,775	-		CA265_RS13555	0.70	+0.1
3,387,904	+				+0.3
3,387,938	+		CA265_RS13560	0.10	+0.6
3,388,005	+		CA265_RS13560	0.25	+0.1
3,388,008	-		CA265_RS13560	0.25	-0.0
3,388,017	+		CA265_RS13560	0.27	-0.6
3,388,017	+		CA265_RS13560	0.27	+1.0
3,388,022	-		CA265_RS13560	0.28	+0.2
3,388,022	-		CA265_RS13560	0.28	+0.2
3,388,059	+		CA265_RS13560	0.36	+0.1
3,388,059	+		CA265_RS13560	0.36	-0.9
3,388,059	+		CA265_RS13560	0.36	-0.3
3,388,059	+		CA265_RS13560	0.36	-0.3
3,388,060	-		CA265_RS13560	0.37	+0.3
3,388,060	-		CA265_RS13560	0.37	-0.2
3,388,061	+		CA265_RS13560	0.37	+0.1
3,388,062	-		CA265_RS13560	0.37	-1.4
3,388,072	+		CA265_RS13560	0.39	+0.6
3,388,072	+		CA265_RS13560	0.39	+0.4
3,388,085	-		CA265_RS13560	0.42	-0.5
3,388,092	+		CA265_RS13560	0.44	-0.2
3,388,095	+		CA265_RS13560	0.44	-1.2
3,388,096	-		CA265_RS13560	0.44	+0.2
3,388,230	+		CA265_RS13560	0.74	-0.2
3,388,230	+		CA265_RS13560	0.74	-0.3
3,388,280	+		CA265_RS13560	0.85	-1.2
3,388,304	+		CA265_RS13560	0.90	+1.2
3,388,305	-				+0.9
3,388,349	-				-0.1
3,388,418	-				+0.4
3,388,423	-				-0.5
3,388,441	-				-0.0
3,388,473	+				-0.2
3,388,644	+		CA265_RS13565	0.22	-0.7
3,388,726	+		CA265_RS13565	0.29	-0.4
3,388,730	+		CA265_RS13565	0.29	+0.1
3,388,731	-		CA265_RS13565	0.29	+1.7
3,388,731	-		CA265_RS13565	0.29	-0.1
3,388,763	+		CA265_RS13565	0.31	-0.3
3,388,830	+		CA265_RS13565	0.36	+0.8
3,388,856	+		CA265_RS13565	0.38	-0.7
3,388,878	+		CA265_RS13565	0.40	+0.5
3,388,878	+		CA265_RS13565	0.40	+1.7
3,388,879	-		CA265_RS13565	0.40	+0.0