Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS11010

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
2,703,519	+				+0.7
2,703,556	+				+0.2
2,703,557	-				+0.0
2,703,557	-				+0.3
2,703,574	-				+0.2
2,703,596	-				-0.2
2,703,620	+				+0.6
2,703,621	-				-0.1
2,703,813	-		CA265_RS11010	0.58	+0.7
2,703,829	+		CA265_RS11010	0.65	+0.9
2,703,830	-		CA265_RS11010	0.66	+1.5
2,703,859	+		CA265_RS11010	0.80	-0.2
2,703,859	+		CA265_RS11010	0.80	+0.1
2,703,860	-				-1.3
2,703,861	+		CA265_RS11010	0.80	+0.7
2,703,861	+		CA265_RS11010	0.80	+0.4
2,703,861	+		CA265_RS11010	0.80	-0.2
2,703,861	+		CA265_RS11010	0.80	-0.5
2,703,862	-		CA265_RS11010	0.81	+0.2
2,703,873	-		CA265_RS11010	0.86	+0.0
2,703,928	-				+0.2
2,703,973	-				-0.3
2,703,973	-				-0.3
2,703,991	+				-0.6
2,704,033	+				-0.6
2,704,080	-		CA265_RS11015	0.12	+0.2
2,704,141	-		CA265_RS11015	0.18	-0.4
2,704,218	+		CA265_RS11015	0.26	-0.2
2,704,316	-		CA265_RS11015	0.36	-0.3
2,704,324	+		CA265_RS11015	0.36	+0.3
2,704,324	+		CA265_RS11015	0.36	+0.2
2,704,371	-		CA265_RS11015	0.41	+0.0
2,704,396	-		CA265_RS11015	0.44	-0.9
2,704,404	-		CA265_RS11015	0.44	-0.3
2,704,436	-		CA265_RS11015	0.47	-0.6
2,704,439	+		CA265_RS11015	0.48	+0.6
2,704,464	-		CA265_RS11015	0.50	+0.4
2,704,480	+		CA265_RS11015	0.52	-0.4
2,704,598	+		CA265_RS11015	0.64	-0.8
2,704,673	-		CA265_RS11015	0.71	-0.3
2,704,673	-		CA265_RS11015	0.71	-1.4
2,704,674	+		CA265_RS11015	0.71	+0.3
2,704,674	+		CA265_RS11015	0.71	-0.1
2,704,678	+		CA265_RS11015	0.71	-0.2
2,704,726	+		CA265_RS11015	0.76	-2.4
2,704,733	+		CA265_RS11015	0.77	+1.2
2,704,733	+		CA265_RS11015	0.77	-0.4
2,704,872	+				-0.0
2,704,872	+				-0.1
2,704,872	+				-1.9
2,704,887	+				-0.6
2,704,897	-				-1.9