Strain Fitness in Pedobacter sp. GW460-11-11-14-LB5 around CA265_RS09860

Experiment: R2A with benzoic 0.1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A with benzoic 0.1 mg/ml
2,430,106	+		CA265_RS09855	0.44	-0.8
2,430,106	+		CA265_RS09855	0.44	-0.0
2,430,110	-		CA265_RS09855	0.44	-0.1
2,430,124	-		CA265_RS09855	0.45	+1.3
2,430,127	+		CA265_RS09855	0.46	+0.0
2,430,128	-		CA265_RS09855	0.46	+0.5
2,430,128	-		CA265_RS09855	0.46	+0.5
2,430,145	+		CA265_RS09855	0.47	+0.6
2,430,146	-		CA265_RS09855	0.47	-0.1
2,430,213	+		CA265_RS09855	0.51	-0.6
2,430,214	-		CA265_RS09855	0.51	+0.4
2,430,214	-		CA265_RS09855	0.51	+0.3
2,430,215	+		CA265_RS09855	0.51	-2.6
2,430,215	+		CA265_RS09855	0.51	-0.0
2,430,216	-		CA265_RS09855	0.51	+0.4
2,430,280	-		CA265_RS09855	0.55	+0.1
2,430,315	+		CA265_RS09855	0.57	-0.1
2,430,316	-		CA265_RS09855	0.57	-0.0
2,430,357	+		CA265_RS09855	0.60	-0.3
2,430,358	-		CA265_RS09855	0.60	-0.0
2,430,358	-		CA265_RS09855	0.60	+0.3
2,430,358	-		CA265_RS09855	0.60	+0.2
2,430,358	-		CA265_RS09855	0.60	-2.3
2,430,358	-		CA265_RS09855	0.60	+0.5
2,430,383	-		CA265_RS09855	0.61	-0.2
2,430,435	+		CA265_RS09855	0.65	+0.2
2,430,473	-		CA265_RS09855	0.67	-0.6
2,430,500	+		CA265_RS09855	0.69	+0.4
2,430,536	+		CA265_RS09855	0.71	-0.5
2,430,669	-		CA265_RS09855	0.79	+0.0
2,430,697	+		CA265_RS09855	0.81	-0.1
2,430,780	-		CA265_RS09855	0.86	-0.2
2,430,790	+		CA265_RS09855	0.87	+1.1
2,430,790	+		CA265_RS09855	0.87	-0.3
2,430,790	+				-0.3
2,430,859	-				-0.1
2,430,864	-				+0.1
2,430,868	+				-0.1
2,430,868	+				-0.2
2,430,874	-				+0.0
2,430,927	+				+0.3
2,430,931	-				-0.3
2,430,952	+				-0.2
2,430,963	-				-0.2
2,431,004	-				-0.3
2,431,008	+				+0.0
2,431,069	-				+0.2
2,431,077	+				+0.6
2,431,085	+				+0.7
2,431,147	+				+0.3
2,431,240	+				-0.4
2,431,315	+		CA265_RS09860	0.11	-0.4
2,431,316	-		CA265_RS09860	0.11	-0.1
2,431,317	+		CA265_RS09860	0.11	+0.6
2,431,317	+		CA265_RS09860	0.11	-1.2
2,431,427	-		CA265_RS09860	0.16	+0.6
2,431,464	-		CA265_RS09860	0.18	+1.9
2,431,518	+		CA265_RS09860	0.20	+0.6
2,431,565	+		CA265_RS09860	0.22	+0.7
2,431,627	+		CA265_RS09860	0.25	-0.1
2,431,627	+		CA265_RS09860	0.25	+0.2
2,431,697	+		CA265_RS09860	0.29	-0.4
2,431,706	+		CA265_RS09860	0.29	+1.0
2,431,707	-		CA265_RS09860	0.29	-0.3
2,431,808	+		CA265_RS09860	0.34	-0.0
2,431,921	+		CA265_RS09860	0.39	+0.2
2,431,922	-		CA265_RS09860	0.39	-1.8
2,432,028	+		CA265_RS09860	0.44	+0.0
2,432,233	-		CA265_RS09860	0.54	-0.1
2,432,243	+		CA265_RS09860	0.54	-0.3
2,432,263	+		CA265_RS09860	0.55	+0.7
2,432,336	-		CA265_RS09860	0.59	+0.8
2,432,360	-		CA265_RS09860	0.60	-0.7
2,432,414	-		CA265_RS09860	0.62	-0.7
2,432,500	+		CA265_RS09860	0.66	-0.9
2,432,584	+		CA265_RS09860	0.70	-0.8
2,432,603	+		CA265_RS09860	0.71	-0.3
2,432,683	+		CA265_RS09860	0.75	+0.5
2,432,683	+		CA265_RS09860	0.75	-0.0
2,432,723	+		CA265_RS09860	0.77	-0.7
2,432,723	+		CA265_RS09860	0.77	+1.0
2,432,794	+		CA265_RS09860	0.80	-0.1
2,432,942	-		CA265_RS09860	0.87	-0.0
2,432,979	+		CA265_RS09860	0.89	+0.4
2,432,979	+		CA265_RS09860	0.89	+0.0
2,432,979	+		CA265_RS09860	0.89	+0.3
2,432,980	-		CA265_RS09860	0.89	-0.1
2,433,105	+				+0.0
2,433,105	+				+0.8
2,433,119	+				+0.6
2,433,142	+				-0.0
2,433,215	+				-0.1
2,433,348	+		CA265_RS09865	0.14	-0.2
2,433,407	-		CA265_RS09865	0.20	-0.3
2,433,540	+		CA265_RS09865	0.33	-0.1
2,433,614	-		CA265_RS09865	0.41	-0.4
2,433,646	-		CA265_RS09865	0.44	-1.0
2,433,709	-		CA265_RS09865	0.50	+0.1
2,433,709	-		CA265_RS09865	0.50	-0.7
2,433,852	+		CA265_RS09865	0.65	-0.1
2,433,853	-		CA265_RS09865	0.65	+0.1
2,433,883	+		CA265_RS09865	0.68	+1.7
2,433,884	-		CA265_RS09865	0.68	-0.4
2,433,929	-		CA265_RS09865	0.73	+0.1
2,433,931	+		CA265_RS09865	0.73	+0.3
2,433,975	+		CA265_RS09865	0.77	-0.3
2,434,139	-				-0.0
2,434,181	+				+0.1